RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 DCAF8L2P0C7V8 631 aa5.72□□□□□ -1.49
NEB-204ENST00000409198 FAM9AQ8IZU1 332 aaPredicted RBP5.62□□□□□ -1.51
NEB-204ENST00000409198 PELP1Q8IZL8 1130 aaKnown RBP5.51□□□□□ -1.53
NEB-204ENST00000409198 APLP2Q06481 763 aa5.33□□□□□ -1.56
NEB-204ENST00000409198 CCER1Q8TC90 406 aaPredicted RBP5.29□□□□□ -1.56
NEB-204ENST00000409198 ERICH6Q7L0X2 663 aa5.27□□□□□ -1.57
NEB-204ENST00000409198 MYT1LQ9UL68 1186 aa5.2□□□□□ -1.58
NEB-204ENST00000409198 ATP1B4Q9UN42 357 aaPredicted RBP5.14□□□□□ -1.59
NEB-204ENST00000409198 EHMT2Q96KQ7 1210 aa5.12□□□□□ -1.59
NEB-204ENST00000409198 SUPT5HO00267 1087 aaKnown RBP5.08□□□□□ -1.6
NEB-204ENST00000409198 DAXXQ9UER7 740 aaPredicted RBP5.08□□□□□ -1.6
NEB-204ENST00000409198 YTHDC1Q96MU7 727 aaKnown RBP5.07□□□□□ -1.6
NEB-204ENST00000409198 NISCHQ9Y2I1 1504 aa5.04□□□□□ -1.6
NEB-204ENST00000409198 NEFLP07196 543 aa5.03□□□□□ -1.6
NEB-204ENST00000409198 SLC4A1APQ9BWU0 796 aaKnown RBP5.02□□□□□ -1.61
NEB-204ENST00000409198 MYT1Q01538 1121 aa5□□□□□ -1.61
NEB-204ENST00000409198 CHIC1Q5VXU3 224 aa4.99□□□□□ -1.61
NEB-204ENST00000409198 RANGAP1P46060 587 aaPredicted RBP4.99□□□□□ -1.61
NEB-204ENST00000409198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.98□□□□□ -1.61
NEB-204ENST00000409198 HNRNPUL2Q1KMD3 747 aaKnown RBP4.98□□□□□ -1.61
NEB-204ENST00000409198 PPARGC1BQ86YN6 1023 aaKnown RBP4.94□□□□□ -1.62
NEB-204ENST00000409198 CENPBP07199 599 aaPredicted RBP4.94□□□□□ -1.62
NEB-204ENST00000409198 ZBTB47Q9UFB7 747 aaPredicted RBP4.93□□□□□ -1.62
NEB-204ENST00000409198 TTBK1Q5TCY1 1321 aaPredicted RBP4.93□□□□□ -1.62
NEB-204ENST00000409198 SLC24A1O60721 1099 aa4.92□□□□□ -1.62
NEB-204ENST00000409198 POLR3GLQ9BT43 218 aa4.92□□□□□ -1.62
NEB-204ENST00000409198 NEFMP07197 916 aa4.91□□□□□ -1.62
NEB-204ENST00000409198 CLSPNQ9HAW4 1339 aa4.9□□□□□ -1.62
NEB-204ENST00000409198 BCANQ96GW7 911 aa4.9□□□□□ -1.63
NEB-204ENST00000409198 PCGF6Q9BYE7 350 aa4.89□□□□□ -1.63
NEB-204ENST00000409198 ZNF316A6NFI3 1004 aaPredicted RBP4.88□□□□□ -1.63
NEB-204ENST00000409198 UBTFP17480 764 aaKnown RBP4.86□□□□□ -1.63
NEB-204ENST00000409198 AEBP2Q6ZN18 517 aaPredicted RBP4.85□□□□□ -1.63
NEB-204ENST00000409198 ESF1Q9H501 851 aaKnown RBP4.85□□□□□ -1.63
NEB-204ENST00000409198 CDK11BP21127 795 aaKnown RBP4.84□□□□□ -1.63
NEB-204ENST00000409198 CDK11AQ9UQ88 783 aaPredicted RBP4.84□□□□□ -1.63
NEB-204ENST00000409198 SHROOM4Q9ULL8 1493 aa4.83□□□□□ -1.64
NEB-204ENST00000409198 ZEB1P37275 1124 aaPredicted RBP4.82□□□□□ -1.64
NEB-204ENST00000409198 HRCP23327 699 aa4.79□□□□□ -1.64
NEB-204ENST00000409198 RTL5Q5HYW3 569 aaPredicted RBP4.79□□□□□ -1.64
NEB-204ENST00000409198 NPM2Q86SE8 214 aaKnown RBP4.77□□□□□ -1.65
NEB-204ENST00000409198 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
NEB-204ENST00000409198 PLPPR3Q6T4P5 718 aa4.75□□□□□ -1.65
NEB-204ENST00000409198 TRIM41Q8WV44 630 aa4.75□□□□□ -1.65
NEB-204ENST00000409198 A0A0G2JS52 829 aa4.74□□□□□ -1.65
NEB-204ENST00000409198 ITGAEP38570 1179 aa4.73□□□□□ -1.65
NEB-204ENST00000409198 SCAF1Q9H7N4 1312 aaKnown RBP4.73□□□□□ -1.65
NEB-204ENST00000409198 CANXP27824 592 aaKnown RBP4.73□□□□□ -1.65
NEB-204ENST00000409198 FBLN2P98095 1184 aa4.73□□□□□ -1.65
NEB-204ENST00000409198 STAG3Q9UJ98 1225 aa4.73□□□□□ -1.65
NEB-204ENST00000409198 DCAF8L1A6NGE4 600 aa4.72□□□□□ -1.65
NEB-204ENST00000409198 BCL11AQ9H165 835 aa4.72□□□□□ -1.65
NEB-204ENST00000409198 NPM1P06748 294 aaKnown RBP eCLIP4.72□□□□□ -1.65
NEB-204ENST00000409198 KRI1Q8N9T8 703 aaKnown RBP4.72□□□□□ -1.65
NEB-204ENST00000409198 ANP32BQ92688 251 aaKnown RBP4.69□□□□□ -1.66
NEB-204ENST00000409198 TRHP20396 242 aaPredicted RBP4.69□□□□□ -1.66
NEB-204ENST00000409198 TRIM52Q96A61 297 aa4.69□□□□□ -1.66
NEB-204ENST00000409198 FOXD1Q16676 465 aa4.68□□□□□ -1.66
NEB-204ENST00000409198 LOC105371045A0A1W2PR82 267 aa4.67□□□□□ -1.66
NEB-204ENST00000409198 HAP1P54257 671 aaPredicted RBP4.67□□□□□ -1.66
NEB-204ENST00000409198 CCDC180Q9P1Z9 1646 aa4.65□□□□□ -1.66
NEB-204ENST00000409198 TULP1O00294 542 aaPredicted RBP4.65□□□□□ -1.67
NEB-204ENST00000409198 GTF3C3Q9Y5Q9 886 aa4.65□□□□□ -1.67
NEB-204ENST00000409198 PRKCSHP14314 528 aaPredicted RBP4.65□□□□□ -1.67
NEB-204ENST00000409198 NCBP3Q53F19 620 aaKnown RBP4.64□□□□□ -1.67
NEB-204ENST00000409198 HSP90AA1P07900 732 aaKnown RBP4.64□□□□□ -1.67
NEB-204ENST00000409198 NPHP1O15259 732 aa4.64□□□□□ -1.67
NEB-204ENST00000409198 PRM3Q9NNZ6 103 aa4.62□□□□□ -1.67
NEB-204ENST00000409198 C14orf37Q86TY3 774 aa4.62□□□□□ -1.67
NEB-204ENST00000409198 CHGAP10645 457 aaKnown RBP4.62□□□□□ -1.67
NEB-204ENST00000409198 FAM50AQ14320 339 aaKnown RBP4.59□□□□□ -1.67
NEB-204ENST00000409198 ZNF326Q5BKZ1 582 aaKnown RBP4.59□□□□□ -1.67
NEB-204ENST00000409198 ZBTB7CA1YPR0 619 aa4.59□□□□□ -1.67
NEB-204ENST00000409198 ABCC9O60706 1549 aa4.59□□□□□ -1.67
NEB-204ENST00000409198 GOLGA2Q08379 1002 aa4.59□□□□□ -1.68
NEB-204ENST00000409198 ARID4BQ4LE39 1312 aaPredicted RBP4.59□□□□□ -1.68
NEB-204ENST00000409198 ARXQ96QS3 562 aa4.58□□□□□ -1.68
NEB-204ENST00000409198 TMX4Q9H1E5 349 aaPredicted RBP4.58□□□□□ -1.68
NEB-204ENST00000409198 UPF2Q9HAU5 1272 aaKnown RBP4.58□□□□□ -1.68
NEB-204ENST00000409198 PHF23Q9BUL5 403 aaPredicted RBP4.57□□□□□ -1.68
NEB-204ENST00000409198 CLSTN1O94985 981 aa4.56□□□□□ -1.68
NEB-204ENST00000409198 EIF5BO60841 1220 aaKnown RBP4.56□□□□□ -1.68
NEB-204ENST00000409198 FKBP8Q14318 412 aa4.56□□□□□ -1.68
NEB-204ENST00000409198 EIF4G2P78344 907 aaKnown RBP eCLIP4.55□□□□□ -1.68
NEB-204ENST00000409198 TRIM44Q96DX7 344 aaPredicted RBP4.55□□□□□ -1.68
NEB-204ENST00000409198 ZRSR1Q15695 479 aaKnown RBP4.55□□□□□ -1.68
NEB-204ENST00000409198 CCDC136Q96JN2 1154 aa4.55□□□□□ -1.68
NEB-204ENST00000409198 PLEKHG5O94827 1062 aa4.55□□□□□ -1.68
NEB-204ENST00000409198 ERCC6Q03468 1493 aa4.54□□□□□ -1.68
NEB-204ENST00000409198 MYH16Q9H6N6 1097 aa4.54□□□□□ -1.68
NEB-204ENST00000409198 DIEXFQ68CQ4 756 aaKnown RBP4.54□□□□□ -1.68
NEB-204ENST00000409198 ANP32CO43423 234 aa4.54□□□□□ -1.68
NEB-204ENST00000409198 ANP32EQ9BTT0 268 aa4.54□□□□□ -1.68
NEB-204ENST00000409198 NCLP19338 710 aaKnown RBP4.53□□□□□ -1.68
NEB-204ENST00000409198 ZNF777Q9ULD5 760 aaPredicted RBP4.52□□□□□ -1.69
NEB-204ENST00000409198 NEUROD1Q13562 356 aa4.52□□□□□ -1.69
NEB-204ENST00000409198 L1TD1Q5T7N2 865 aaKnown RBP4.52□□□□□ -1.69
NEB-204ENST00000409198 PPP1R15AO75807 674 aaPredicted RBP4.52□□□□□ -1.69
NEB-204ENST00000409198 ACIN1Q9UKV3 1341 aaKnown RBP4.51□□□□□ -1.69
NEB-204ENST00000409198 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms