RNA–Protein interactions for RNA: ENST00000409019.5

MTA3-206, Transcript of metastasis associated 1 family member 3, humanhuman

TSL 5

Gene MTA3, Length 2,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA3-206ENST00000409019 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
MTA3-206ENST00000409019 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
MTA3-206ENST00000409019 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
MTA3-206ENST00000409019 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
MTA3-206ENST00000409019 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
MTA3-206ENST00000409019 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
MTA3-206ENST00000409019 DCAF8L2P0C7V8 631 aa17.52■□□□□ 0.4
MTA3-206ENST00000409019 DCAF1Q9Y4B6 1507 aa17.43■□□□□ 0.38
MTA3-206ENST00000409019 ABCC9O60706 1549 aa17.4■□□□□ 0.38
MTA3-206ENST00000409019 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
MTA3-206ENST00000409019 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
MTA3-206ENST00000409019 NACADO15069 1562 aa17.09■□□□□ 0.33
MTA3-206ENST00000409019 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
MTA3-206ENST00000409019 SCRIBQ14160 1630 aa16.94■□□□□ 0.3
MTA3-206ENST00000409019 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
MTA3-206ENST00000409019 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
MTA3-206ENST00000409019 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
MTA3-206ENST00000409019 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
MTA3-206ENST00000409019 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
MTA3-206ENST00000409019 ADRA2BP18089 450 aa16.48■□□□□ 0.23
MTA3-206ENST00000409019 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
MTA3-206ENST00000409019 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
MTA3-206ENST00000409019 BICRAQ9NZM4 1560 aa16.44■□□□□ 0.22
MTA3-206ENST00000409019 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
MTA3-206ENST00000409019 KCNA4P22459 653 aa16.4■□□□□ 0.22
MTA3-206ENST00000409019 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
MTA3-206ENST00000409019 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
MTA3-206ENST00000409019 SMARCA4P51532 1647 aa16.21■□□□□ 0.19
MTA3-206ENST00000409019 WIZO95785 1651 aa16.19■□□□□ 0.18
MTA3-206ENST00000409019 HRCP23327 699 aa16.14■□□□□ 0.17
MTA3-206ENST00000409019 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
MTA3-206ENST00000409019 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
MTA3-206ENST00000409019 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
MTA3-206ENST00000409019 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
MTA3-206ENST00000409019 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
MTA3-206ENST00000409019 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
MTA3-206ENST00000409019 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
MTA3-206ENST00000409019 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
MTA3-206ENST00000409019 PPARGC1BQ86YN6 1023 aaKnown RBP15.89■□□□□ 0.13
MTA3-206ENST00000409019 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
MTA3-206ENST00000409019 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
MTA3-206ENST00000409019 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
MTA3-206ENST00000409019 NCAPD3P42695 1498 aa15.81■□□□□ 0.12
MTA3-206ENST00000409019 HMGXB3Q12766 1538 aa15.76■□□□□ 0.11
MTA3-206ENST00000409019 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
MTA3-206ENST00000409019 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
MTA3-206ENST00000409019 FOXD1Q16676 465 aa15.66■□□□□ 0.1
MTA3-206ENST00000409019 TRIM26Q12899 539 aaPredicted RBP15.63■□□□□ 0.09
MTA3-206ENST00000409019 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.09
MTA3-206ENST00000409019 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
MTA3-206ENST00000409019 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
MTA3-206ENST00000409019 CFTRP13569 1480 aa15.48■□□□□ 0.07
MTA3-206ENST00000409019 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
MTA3-206ENST00000409019 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
MTA3-206ENST00000409019 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
MTA3-206ENST00000409019 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
MTA3-206ENST00000409019 SOGA1O94964 1423 aa15.32■□□□□ 0.04
MTA3-206ENST00000409019 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
MTA3-206ENST00000409019 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
MTA3-206ENST00000409019 NESP48681 1621 aa15.29■□□□□ 0.04
MTA3-206ENST00000409019 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
MTA3-206ENST00000409019 PRDM2Q13029 1718 aa15.28■□□□□ 0.04
MTA3-206ENST00000409019 CUX1P39880 1505 aa15.27■□□□□ 0.04
MTA3-206ENST00000409019 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
MTA3-206ENST00000409019 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
MTA3-206ENST00000409019 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
MTA3-206ENST00000409019 EEA1Q15075 1411 aa15.24■□□□□ 0.03
MTA3-206ENST00000409019 ZBTB22O15209 634 aa15.23■□□□□ 0.03
MTA3-206ENST00000409019 LAMC3Q9Y6N6 1575 aa15.23■□□□□ 0.03
MTA3-206ENST00000409019 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
MTA3-206ENST00000409019 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
MTA3-206ENST00000409019 FGD5Q6ZNL6 1462 aa15.1■□□□□ 0.01
MTA3-206ENST00000409019 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
MTA3-206ENST00000409019 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
MTA3-206ENST00000409019 TOPBP1Q92547 1522 aa15.08■□□□□ 0.01
MTA3-206ENST00000409019 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
MTA3-206ENST00000409019 KIF27Q86VH2 1401 aa15.06■□□□□ 0
MTA3-206ENST00000409019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
MTA3-206ENST00000409019 GOLGA3Q08378 1498 aa15.05■□□□□ 0
MTA3-206ENST00000409019 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
MTA3-206ENST00000409019 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
MTA3-206ENST00000409019 CUX2O14529 1486 aa15.03■□□□□ -0
MTA3-206ENST00000409019 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
MTA3-206ENST00000409019 SLC24A1O60721 1099 aa15.03■□□□□ -0
MTA3-206ENST00000409019 UBTFP17480 764 aaKnown RBP15.03■□□□□ -0
MTA3-206ENST00000409019 KIF21BO75037 1637 aa15.02■□□□□ -0
MTA3-206ENST00000409019 TNIKQ9UKE5 1360 aa15.02■□□□□ -0
MTA3-206ENST00000409019 RAD54L2Q9Y4B4 1467 aa15□□□□□ -0.01
MTA3-206ENST00000409019 RAPGEF2Q9Y4G8 1499 aa14.99□□□□□ -0.01
MTA3-206ENST00000409019 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
MTA3-206ENST00000409019 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
MTA3-206ENST00000409019 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
MTA3-206ENST00000409019 TTBK1Q5TCY1 1321 aaPredicted RBP14.98□□□□□ -0.01
MTA3-206ENST00000409019 CCER1Q8TC90 406 aaPredicted RBP14.97□□□□□ -0.01
MTA3-206ENST00000409019 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
MTA3-206ENST00000409019 ABCA10Q8WWZ4 1543 aa14.96□□□□□ -0.01
MTA3-206ENST00000409019 IGF1RP08069 1367 aa14.95□□□□□ -0.02
MTA3-206ENST00000409019 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
MTA3-206ENST00000409019 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
MTA3-206ENST00000409019 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms