RNA–Protein interactions for RNA: ENST00000408712.1

SNORA3.3-201, humanhuman

BASIC

Gene SNORA3, Length 125 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA3.3-201ENST00000408712 NISCHQ9Y2I1 1504 aa9.1□□□□□ -0.95
SNORA3.3-201ENST00000408712 CCDC180Q9P1Z9 1646 aa8.01□□□□□ -1.13
SNORA3.3-201ENST00000408712 ABCC9O60706 1549 aa7.97□□□□□ -1.13
SNORA3.3-201ENST00000408712 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
SNORA3.3-201ENST00000408712 NACADO15069 1562 aa7.65□□□□□ -1.18
SNORA3.3-201ENST00000408712 RB1CC1Q8TDY2 1594 aa7.64□□□□□ -1.19
SNORA3.3-201ENST00000408712 MYO15BQ96JP2 1530 aa7.61□□□□□ -1.19
SNORA3.3-201ENST00000408712 PABPN1Q86U42 306 aaKnown RBP eCLIP7.56□□□□□ -1.2
SNORA3.3-201ENST00000408712 DCAF1Q9Y4B6 1507 aa7.54□□□□□ -1.2
SNORA3.3-201ENST00000408712 ZCCHC6Q5VYS8 1495 aaKnown RBP7.51□□□□□ -1.21
SNORA3.3-201ENST00000408712 DNAJC5BQ9UF47 199 aa7.47□□□□□ -1.21
SNORA3.3-201ENST00000408712 BICRAQ9NZM4 1560 aa7.35□□□□□ -1.23
SNORA3.3-201ENST00000408712 UNC13AQ9UPW8 1703 aa7.33□□□□□ -1.24
SNORA3.3-201ENST00000408712 SHROOM4Q9ULL8 1493 aa7.33□□□□□ -1.24
SNORA3.3-201ENST00000408712 SCRIBQ14160 1630 aa7.3□□□□□ -1.24
SNORA3.3-201ENST00000408712 CECR2Q9BXF3 1484 aa7.19□□□□□ -1.26
SNORA3.3-201ENST00000408712 EIF4G1Q04637 1599 aaKnown RBP7.19□□□□□ -1.26
SNORA3.3-201ENST00000408712 CC2D2AQ9P2K1 1620 aa7.17□□□□□ -1.26
SNORA3.3-201ENST00000408712 NCAPD3P42695 1498 aa7.11□□□□□ -1.27
SNORA3.3-201ENST00000408712 ATAD2BQ9ULI0 1458 aa7.06□□□□□ -1.28
SNORA3.3-201ENST00000408712 BAZ1AQ9NRL2 1556 aaPredicted RBP7.05□□□□□ -1.28
SNORA3.3-201ENST00000408712 SMARCA2P51531 1590 aa7.04□□□□□ -1.28
SNORA3.3-201ENST00000408712 SMARCA4P51532 1647 aa7.01□□□□□ -1.29
SNORA3.3-201ENST00000408712 BAZ1BQ9UIG0 1483 aaKnown RBP6.99□□□□□ -1.29
SNORA3.3-201ENST00000408712 MROH2BQ7Z745 1585 aa6.99□□□□□ -1.29
SNORA3.3-201ENST00000408712 PEG3Q9GZU2 1588 aa6.96□□□□□ -1.29
SNORA3.3-201ENST00000408712 RSF1Q96T23 1441 aaPredicted RBP6.96□□□□□ -1.3
SNORA3.3-201ENST00000408712 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
SNORA3.3-201ENST00000408712 CADPSQ9ULU8 1353 aa6.94□□□□□ -1.3
SNORA3.3-201ENST00000408712 PDS5BQ9NTI5 1447 aa6.93□□□□□ -1.3
SNORA3.3-201ENST00000408712 ERCC6Q03468 1493 aa6.91□□□□□ -1.3
SNORA3.3-201ENST00000408712 WIZO95785 1651 aa6.87□□□□□ -1.31
SNORA3.3-201ENST00000408712 SUPT5HO00267 1087 aaKnown RBP6.87□□□□□ -1.31
SNORA3.3-201ENST00000408712 NESP48681 1621 aa6.86□□□□□ -1.31
SNORA3.3-201ENST00000408712 LAMC3Q9Y6N6 1575 aa6.86□□□□□ -1.31
SNORA3.3-201ENST00000408712 CUX2O14529 1486 aa6.85□□□□□ -1.31
SNORA3.3-201ENST00000408712 DNAJC5Q9H3Z4 198 aa6.84□□□□□ -1.31
SNORA3.3-201ENST00000408712 CFTRP13569 1480 aa6.82□□□□□ -1.32
SNORA3.3-201ENST00000408712 CCDC88BA6NC98 1476 aa6.81□□□□□ -1.32
SNORA3.3-201ENST00000408712 TOP2AP11388 1531 aaKnown RBP6.81□□□□□ -1.32
SNORA3.3-201ENST00000408712 FANCD2Q9BXW9 1451 aa6.77□□□□□ -1.33
SNORA3.3-201ENST00000408712 ABCC8Q09428 1581 aa6.75□□□□□ -1.33
SNORA3.3-201ENST00000408712 MRC2Q9UBG0 1479 aa6.75□□□□□ -1.33
SNORA3.3-201ENST00000408712 CEP164Q9UPV0 1460 aa6.75□□□□□ -1.33
SNORA3.3-201ENST00000408712 OSCARQ8IYS5 282 aa6.75□□□□□ -1.33
SNORA3.3-201ENST00000408712 KIF21AQ7Z4S6 1674 aa6.69□□□□□ -1.34
SNORA3.3-201ENST00000408712 WDR62O43379 1518 aa6.68□□□□□ -1.34
SNORA3.3-201ENST00000408712 THOC2Q8NI27 1593 aaKnown RBP6.67□□□□□ -1.34
SNORA3.3-201ENST00000408712 URB2Q14146 1524 aaKnown RBP6.66□□□□□ -1.34
SNORA3.3-201ENST00000408712 SOGA1O94964 1423 aa6.66□□□□□ -1.34
SNORA3.3-201ENST00000408712 IFT140Q96RY7 1462 aa6.66□□□□□ -1.34
SNORA3.3-201ENST00000408712 FBLN2P98095 1184 aa6.64□□□□□ -1.35
SNORA3.3-201ENST00000408712 CHMP7Q8WUX9 453 aaPredicted RBP6.64□□□□□ -1.35
SNORA3.3-201ENST00000408712 TOPBP1Q92547 1522 aa6.64□□□□□ -1.35
SNORA3.3-201ENST00000408712 TDRD9Q8NDG6 1382 aaKnown RBP6.6□□□□□ -1.35
SNORA3.3-201ENST00000408712 DNMBPQ6XZF7 1577 aa6.6□□□□□ -1.35
SNORA3.3-201ENST00000408712 AQRO60306 1485 aaKnown RBP eCLIP6.6□□□□□ -1.35
SNORA3.3-201ENST00000408712 PRDM2Q13029 1718 aa6.59□□□□□ -1.35
SNORA3.3-201ENST00000408712 WRNQ14191 1432 aaPredicted RBP eCLIP6.59□□□□□ -1.36
SNORA3.3-201ENST00000408712 POLA1P09884 1462 aaPredicted RBP6.57□□□□□ -1.36
SNORA3.3-201ENST00000408712 RAD54L2Q9Y4B4 1467 aa6.57□□□□□ -1.36
SNORA3.3-201ENST00000408712 ZNF608Q9ULD9 1512 aaPredicted RBP6.56□□□□□ -1.36
SNORA3.3-201ENST00000408712 TRIM41Q8WV44 630 aa6.55□□□□□ -1.36
SNORA3.3-201ENST00000408712 FGD5Q6ZNL6 1462 aa6.54□□□□□ -1.36
SNORA3.3-201ENST00000408712 CYB5RLQ6IPT4 315 aa6.54□□□□□ -1.36
SNORA3.3-201ENST00000408712 CUX1P39880 1505 aa6.54□□□□□ -1.36
SNORA3.3-201ENST00000408712 GRIN2BQ13224 1484 aa6.53□□□□□ -1.36
SNORA3.3-201ENST00000408712 GAPVD1Q14C86 1478 aa6.53□□□□□ -1.36
SNORA3.3-201ENST00000408712 TARBP1Q13395 1621 aaKnown RBP6.51□□□□□ -1.37
SNORA3.3-201ENST00000408712 JPH4Q96JJ6 628 aa6.51□□□□□ -1.37
SNORA3.3-201ENST00000408712 ABCA10Q8WWZ4 1543 aa6.5□□□□□ -1.37
SNORA3.3-201ENST00000408712 WDR97A6NE52 1622 aa6.5□□□□□ -1.37
SNORA3.3-201ENST00000408712 MAGI1Q96QZ7 1491 aaPredicted RBP6.49□□□□□ -1.37
SNORA3.3-201ENST00000408712 IGF1RP08069 1367 aa6.49□□□□□ -1.37
SNORA3.3-201ENST00000408712 FAM9AQ8IZU1 332 aaPredicted RBP6.48□□□□□ -1.37
SNORA3.3-201ENST00000408712 KIF27Q86VH2 1401 aa6.48□□□□□ -1.37
SNORA3.3-201ENST00000408712 SYNJ2O15056 1496 aa6.47□□□□□ -1.37
SNORA3.3-201ENST00000408712 TOP2BQ02880 1626 aa6.47□□□□□ -1.37
SNORA3.3-201ENST00000408712 FHAD1B1AJZ9 1412 aa6.47□□□□□ -1.37
SNORA3.3-201ENST00000408712 SNAPC4Q5SXM2 1469 aa6.46□□□□□ -1.38
SNORA3.3-201ENST00000408712 CARMIL1Q5VZK9 1371 aa6.45□□□□□ -1.38
SNORA3.3-201ENST00000408712 EIF4G3O43432 1585 aaKnown RBP6.45□□□□□ -1.38
SNORA3.3-201ENST00000408712 NPM1P06748 294 aaKnown RBP eCLIP6.45□□□□□ -1.38
SNORA3.3-201ENST00000408712 BIVM-ERCC5R4GMW8 1640 aa6.43□□□□□ -1.38
SNORA3.3-201ENST00000408712 TRHP20396 242 aaPredicted RBP6.43□□□□□ -1.38
SNORA3.3-201ENST00000408712 CSRNP3Q8WYN3 585 aa6.43□□□□□ -1.38
SNORA3.3-201ENST00000408712 ERICH3Q5RHP9 1530 aa6.43□□□□□ -1.38
SNORA3.3-201ENST00000408712 SYNJ1O43426 1573 aa6.42□□□□□ -1.38
SNORA3.3-201ENST00000408712 GRIN2AQ12879 1464 aa6.4□□□□□ -1.39
SNORA3.3-201ENST00000408712 ARHGEF11O15085 1522 aa6.4□□□□□ -1.39
SNORA3.3-201ENST00000408712 CHIC1Q5VXU3 224 aa6.39□□□□□ -1.39
SNORA3.3-201ENST00000408712 NUP160Q12769 1436 aa6.39□□□□□ -1.39
SNORA3.3-201ENST00000408712 ABCA5Q8WWZ7 1642 aa6.38□□□□□ -1.39
SNORA3.3-201ENST00000408712 CHD1O14646 1710 aa6.37□□□□□ -1.39
SNORA3.3-201ENST00000408712 RIMBP3CA6NJZ7 1639 aa6.37□□□□□ -1.39
SNORA3.3-201ENST00000408712 RIMBP3BA6NNM3 1639 aa6.37□□□□□ -1.39
SNORA3.3-201ENST00000408712 RIMBP3Q9UFD9 1639 aa6.37□□□□□ -1.39
SNORA3.3-201ENST00000408712 KIAA0586Q9BVV6 1533 aa6.37□□□□□ -1.39
SNORA3.3-201ENST00000408712 PRG4Q92954 1404 aaPredicted RBP6.36□□□□□ -1.39
SNORA3.3-201ENST00000408712 CARMIL2Q6F5E8 1435 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms