RNA–Protein interactions for RNA: ENST00000407324.5

C1D-202, Transcript of C1D nuclear receptor corepressor, humanhuman

TSL 3 BASIC

Gene C1D, Length 1,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1D-202ENST00000407324 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
C1D-202ENST00000407324 CHIC1Q5VXU3 224 aa21.39■■□□□ 1.02
C1D-202ENST00000407324 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.69
C1D-202ENST00000407324 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
C1D-202ENST00000407324 FOXD1Q16676 465 aa18.12■□□□□ 0.49
C1D-202ENST00000407324 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
C1D-202ENST00000407324 MSH5O43196 834 aa16.93■□□□□ 0.3
C1D-202ENST00000407324 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
C1D-202ENST00000407324 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
C1D-202ENST00000407324 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
C1D-202ENST00000407324 NISCHQ9Y2I1 1504 aa16.75■□□□□ 0.27
C1D-202ENST00000407324 ADRA2BP18089 450 aa16.7■□□□□ 0.26
C1D-202ENST00000407324 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
C1D-202ENST00000407324 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
C1D-202ENST00000407324 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
C1D-202ENST00000407324 CCDC180Q9P1Z9 1646 aa14.91□□□□□ -0.02
C1D-202ENST00000407324 PPP4R3CPQ6ZMV5 832 aa14.84□□□□□ -0.03
C1D-202ENST00000407324 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
C1D-202ENST00000407324 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
C1D-202ENST00000407324 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
C1D-202ENST00000407324 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
C1D-202ENST00000407324 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
C1D-202ENST00000407324 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
C1D-202ENST00000407324 DNAJC5BQ9UF47 199 aa14.27□□□□□ -0.12
C1D-202ENST00000407324 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
C1D-202ENST00000407324 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
C1D-202ENST00000407324 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
C1D-202ENST00000407324 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
C1D-202ENST00000407324 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
C1D-202ENST00000407324 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
C1D-202ENST00000407324 ABCC9O60706 1549 aa13.93□□□□□ -0.18
C1D-202ENST00000407324 KCNA4P22459 653 aa13.9□□□□□ -0.18
C1D-202ENST00000407324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
C1D-202ENST00000407324 NACADO15069 1562 aa13.83□□□□□ -0.19
C1D-202ENST00000407324 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
C1D-202ENST00000407324 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
C1D-202ENST00000407324 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
C1D-202ENST00000407324 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
C1D-202ENST00000407324 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
C1D-202ENST00000407324 DSG3P32926 999 aa13.51□□□□□ -0.25
C1D-202ENST00000407324 CAPN15O75808 1086 aa13.43□□□□□ -0.26
C1D-202ENST00000407324 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
C1D-202ENST00000407324 SCRIBQ14160 1630 aa13.38□□□□□ -0.27
C1D-202ENST00000407324 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
C1D-202ENST00000407324 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
C1D-202ENST00000407324 POTEHQ6S545 545 aa13.21□□□□□ -0.29
C1D-202ENST00000407324 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
C1D-202ENST00000407324 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
C1D-202ENST00000407324 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
C1D-202ENST00000407324 ABCB7O75027 752 aa13.16□□□□□ -0.3
C1D-202ENST00000407324 APLP2Q06481 763 aa13.13□□□□□ -0.31
C1D-202ENST00000407324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
C1D-202ENST00000407324 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
C1D-202ENST00000407324 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
C1D-202ENST00000407324 BAZ1AQ9NRL2 1556 aaPredicted RBP12.96□□□□□ -0.33
C1D-202ENST00000407324 SMARCA4P51532 1647 aa12.96□□□□□ -0.34
C1D-202ENST00000407324 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
C1D-202ENST00000407324 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
C1D-202ENST00000407324 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
C1D-202ENST00000407324 CECR2Q9BXF3 1484 aa12.93□□□□□ -0.34
C1D-202ENST00000407324 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
C1D-202ENST00000407324 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
C1D-202ENST00000407324 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
C1D-202ENST00000407324 RSF1Q96T23 1441 aaPredicted RBP12.83□□□□□ -0.36
C1D-202ENST00000407324 ZBTB22O15209 634 aa12.82□□□□□ -0.36
C1D-202ENST00000407324 POLA2Q14181 598 aa12.81□□□□□ -0.36
C1D-202ENST00000407324 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
C1D-202ENST00000407324 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
C1D-202ENST00000407324 WIZO95785 1651 aa12.78□□□□□ -0.36
C1D-202ENST00000407324 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
C1D-202ENST00000407324 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
C1D-202ENST00000407324 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
C1D-202ENST00000407324 ATAD2BQ9ULI0 1458 aa12.74□□□□□ -0.37
C1D-202ENST00000407324 NCAPD3P42695 1498 aa12.73□□□□□ -0.37
C1D-202ENST00000407324 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
C1D-202ENST00000407324 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
C1D-202ENST00000407324 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
C1D-202ENST00000407324 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
C1D-202ENST00000407324 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
C1D-202ENST00000407324 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
C1D-202ENST00000407324 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
C1D-202ENST00000407324 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
C1D-202ENST00000407324 CSRNP3Q8WYN3 585 aa12.49□□□□□ -0.41
C1D-202ENST00000407324 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.42
C1D-202ENST00000407324 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
C1D-202ENST00000407324 REM2Q8IYK8 340 aaPredicted RBP12.41□□□□□ -0.42
C1D-202ENST00000407324 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
C1D-202ENST00000407324 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
C1D-202ENST00000407324 CFTRP13569 1480 aa12.36□□□□□ -0.43
C1D-202ENST00000407324 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
C1D-202ENST00000407324 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
C1D-202ENST00000407324 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
C1D-202ENST00000407324 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
C1D-202ENST00000407324 FXR2P51116 673 aaKnown RBP eCLIP12.26□□□□□ -0.45
C1D-202ENST00000407324 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
C1D-202ENST00000407324 NESP48681 1621 aa12.2□□□□□ -0.46
C1D-202ENST00000407324 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
C1D-202ENST00000407324 MKRN4PQ13434 485 aaPredicted RBP12.17□□□□□ -0.46
C1D-202ENST00000407324 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
C1D-202ENST00000407324 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms