RNA–Protein interactions for RNA: ENST00000406449.8

PVR-204, Transcript of poliovirus receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PVR, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVR-204ENST00000406449 NISCHQ9Y2I1 1504 aa42.92■■■■■ 4.46
PVR-204ENST00000406449 CCDC180Q9P1Z9 1646 aa38.32■■■■□ 3.72
PVR-204ENST00000406449 ABCC9O60706 1549 aa37.66■■■■□ 3.62
PVR-204ENST00000406449 RB1CC1Q8TDY2 1594 aa36.13■■■■□ 3.37
PVR-204ENST00000406449 NACADO15069 1562 aa36.02■■■■□ 3.36
PVR-204ENST00000406449 DCAF8L2P0C7V8 631 aa35.93■■■■□ 3.34
PVR-204ENST00000406449 ZCCHC6Q5VYS8 1495 aaKnown RBP35.7■■■■□ 3.31
PVR-204ENST00000406449 MYO15BQ96JP2 1530 aa35.7■■■■□ 3.3
PVR-204ENST00000406449 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
PVR-204ENST00000406449 DCAF1Q9Y4B6 1507 aa35.47■■■■□ 3.27
PVR-204ENST00000406449 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
PVR-204ENST00000406449 BICRAQ9NZM4 1560 aa35.09■■■■□ 3.21
PVR-204ENST00000406449 SCRIBQ14160 1630 aa34.94■■■■□ 3.18
PVR-204ENST00000406449 DNAJC5BQ9UF47 199 aa34.78■■■■□ 3.16
PVR-204ENST00000406449 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
PVR-204ENST00000406449 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
PVR-204ENST00000406449 CC2D2AQ9P2K1 1620 aa34.1■■■■□ 3.05
PVR-204ENST00000406449 CECR2Q9BXF3 1484 aa33.85■■■■□ 3.01
PVR-204ENST00000406449 SMARCA4P51532 1647 aa33.39■■■□□ 2.94
PVR-204ENST00000406449 BAZ1AQ9NRL2 1556 aaPredicted RBP33.27■■■□□ 2.92
PVR-204ENST00000406449 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
PVR-204ENST00000406449 NCAPD3P42695 1498 aa33.21■■■□□ 2.91
PVR-204ENST00000406449 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
PVR-204ENST00000406449 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
PVR-204ENST00000406449 HMGXB3Q12766 1538 aa33.06■■■□□ 2.88
PVR-204ENST00000406449 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
PVR-204ENST00000406449 BAZ1BQ9UIG0 1483 aaKnown RBP32.93■■■□□ 2.86
PVR-204ENST00000406449 WIZO95785 1651 aa32.79■■■□□ 2.84
PVR-204ENST00000406449 RSF1Q96T23 1441 aaPredicted RBP32.6■■■□□ 2.81
PVR-204ENST00000406449 NESP48681 1621 aa32.56■■■□□ 2.8
PVR-204ENST00000406449 ERCC6Q03468 1493 aa32.45■■■□□ 2.78
PVR-204ENST00000406449 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
PVR-204ENST00000406449 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
PVR-204ENST00000406449 KIF21AQ7Z4S6 1674 aa32.25■■■□□ 2.75
PVR-204ENST00000406449 CADPSQ9ULU8 1353 aa32.22■■■□□ 2.75
PVR-204ENST00000406449 CUX2O14529 1486 aa32.18■■■□□ 2.74
PVR-204ENST00000406449 PDS5BQ9NTI5 1447 aa32.15■■■□□ 2.74
PVR-204ENST00000406449 THOC2Q8NI27 1593 aaKnown RBP32.13■■■□□ 2.73
PVR-204ENST00000406449 CFTRP13569 1480 aa32■■■□□ 2.71
PVR-204ENST00000406449 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
PVR-204ENST00000406449 PRDM2Q13029 1718 aa31.92■■■□□ 2.7
PVR-204ENST00000406449 FANCD2Q9BXW9 1451 aa31.88■■■□□ 2.69
PVR-204ENST00000406449 MRC2Q9UBG0 1479 aa31.86■■■□□ 2.69
PVR-204ENST00000406449 CEP164Q9UPV0 1460 aa31.86■■■□□ 2.69
PVR-204ENST00000406449 WDR62O43379 1518 aa31.79■■■□□ 2.68
PVR-204ENST00000406449 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
PVR-204ENST00000406449 URB2Q14146 1524 aaKnown RBP31.61■■■□□ 2.65
PVR-204ENST00000406449 DNAJC5Q9H3Z4 198 aa31.45■■■□□ 2.62
PVR-204ENST00000406449 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
PVR-204ENST00000406449 DNMBPQ6XZF7 1577 aa31.32■■■□□ 2.6
PVR-204ENST00000406449 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
PVR-204ENST00000406449 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
PVR-204ENST00000406449 ZNF608Q9ULD9 1512 aaPredicted RBP31.12■■■□□ 2.57
PVR-204ENST00000406449 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
PVR-204ENST00000406449 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
PVR-204ENST00000406449 CUX1P39880 1505 aa31.06■■■□□ 2.56
PVR-204ENST00000406449 EIF4G3O43432 1585 aaKnown RBP31.01■■■□□ 2.55
PVR-204ENST00000406449 FGD5Q6ZNL6 1462 aa30.98■■■□□ 2.55
PVR-204ENST00000406449 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
PVR-204ENST00000406449 SOGA1O94964 1423 aa30.92■■■□□ 2.54
PVR-204ENST00000406449 AQRO60306 1485 aaKnown RBP eCLIP30.9■■■□□ 2.547e-8■■■■■ 36.7
PVR-204ENST00000406449 WDR97A6NE52 1622 aa30.82■■■□□ 2.52
PVR-204ENST00000406449 OSCARQ8IYS5 282 aa30.79■■■□□ 2.52
PVR-204ENST00000406449 TDRD9Q8NDG6 1382 aaKnown RBP30.78■■■□□ 2.52
PVR-204ENST00000406449 BIVM-ERCC5R4GMW8 1640 aa30.77■■■□□ 2.52
PVR-204ENST00000406449 SYNJ1O43426 1573 aa30.75■■■□□ 2.51
PVR-204ENST00000406449 TOP2BQ02880 1626 aa30.74■■■□□ 2.51
PVR-204ENST00000406449 CHD1O14646 1710 aa30.74■■■□□ 2.51
PVR-204ENST00000406449 WRNQ14191 1432 aaPredicted RBP eCLIP30.74■■■□□ 2.51
PVR-204ENST00000406449 ABCA10Q8WWZ4 1543 aa30.65■■■□□ 2.5
PVR-204ENST00000406449 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
PVR-204ENST00000406449 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
PVR-204ENST00000406449 ABCA5Q8WWZ7 1642 aa30.6■■■□□ 2.49
PVR-204ENST00000406449 GRIN2BQ13224 1484 aa30.58■■■□□ 2.49
PVR-204ENST00000406449 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
PVR-204ENST00000406449 FBLN2P98095 1184 aa30.54■■■□□ 2.48
PVR-204ENST00000406449 MAGI1Q96QZ7 1491 aaPredicted RBP30.53■■■□□ 2.48
PVR-204ENST00000406449 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
PVR-204ENST00000406449 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
PVR-204ENST00000406449 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
PVR-204ENST00000406449 SYNJ2O15056 1496 aa30.42■■■□□ 2.46
PVR-204ENST00000406449 CHMP7Q8WUX9 453 aaPredicted RBP30.41■■■□□ 2.46
PVR-204ENST00000406449 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
PVR-204ENST00000406449 ARHGEF11O15085 1522 aa30.35■■■□□ 2.45
PVR-204ENST00000406449 ADAMTS12P58397 1594 aa30.31■■■□□ 2.44
PVR-204ENST00000406449 CLASP1Q7Z460 1538 aa30.31■■■□□ 2.44
PVR-204ENST00000406449 ERICH3Q5RHP9 1530 aa30.28■■■□□ 2.44
PVR-204ENST00000406449 GRIN2AQ12879 1464 aa30.21■■■□□ 2.43
PVR-204ENST00000406449 FHAD1B1AJZ9 1412 aa30.19■■■□□ 2.42
PVR-204ENST00000406449 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
PVR-204ENST00000406449 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
PVR-204ENST00000406449 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
PVR-204ENST00000406449 NUP160Q12769 1436 aa30.07■■■□□ 2.4
PVR-204ENST00000406449 CYB5RLQ6IPT4 315 aa30.04■■■□□ 2.4
PVR-204ENST00000406449 IGF1RP08069 1367 aa30.02■■■□□ 2.4
PVR-204ENST00000406449 CUL7Q14999 1698 aa30.01■■■□□ 2.39
PVR-204ENST00000406449 SHROOM2Q13796 1616 aa29.94■■■□□ 2.38
PVR-204ENST00000406449 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
PVR-204ENST00000406449 RUSC2Q8N2Y8 1516 aa29.87■■■□□ 2.37
PVR-204ENST00000406449 CARMIL1Q5VZK9 1371 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms