RNA–Protein interactions for RNA: ENST00000405940.6

EIF2B4-202, Transcript of eukaryotic translation initiation factor 2B subunit delta, humanhuman

TSL 1 (best)

Gene EIF2B4, Length 1,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF2B4-202ENST00000405940 NISCHQ9Y2I1 1504 aa39.78■■■■□ 3.96
EIF2B4-202ENST00000405940 CCDC180Q9P1Z9 1646 aa35.47■■■■□ 3.27
EIF2B4-202ENST00000405940 ABCC9O60706 1549 aa35.06■■■■□ 3.2
EIF2B4-202ENST00000405940 RB1CC1Q8TDY2 1594 aa33.57■■■□□ 2.96
EIF2B4-202ENST00000405940 NACADO15069 1562 aa33.47■■■□□ 2.95
EIF2B4-202ENST00000405940 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
EIF2B4-202ENST00000405940 MYO15BQ96JP2 1530 aa33.2■■■□□ 2.91
EIF2B4-202ENST00000405940 ZCCHC6Q5VYS8 1495 aaKnown RBP33.06■■■□□ 2.88
EIF2B4-202ENST00000405940 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
EIF2B4-202ENST00000405940 UNC13AQ9UPW8 1703 aa32.78■■■□□ 2.84
EIF2B4-202ENST00000405940 PABPN1Q86U42 306 aaKnown RBP eCLIP32.73■■■□□ 2.832e-6■■□□□ 14
EIF2B4-202ENST00000405940 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
EIF2B4-202ENST00000405940 DNAJC5BQ9UF47 199 aa32.59■■■□□ 2.81
EIF2B4-202ENST00000405940 SCRIBQ14160 1630 aa32.32■■■□□ 2.76
EIF2B4-202ENST00000405940 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
EIF2B4-202ENST00000405940 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
EIF2B4-202ENST00000405940 CC2D2AQ9P2K1 1620 aa31.7■■■□□ 2.67
EIF2B4-202ENST00000405940 CECR2Q9BXF3 1484 aa31.55■■■□□ 2.64
EIF2B4-202ENST00000405940 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
EIF2B4-202ENST00000405940 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
EIF2B4-202ENST00000405940 ATAD2BQ9ULI0 1458 aa30.87■■■□□ 2.53
EIF2B4-202ENST00000405940 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
EIF2B4-202ENST00000405940 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
EIF2B4-202ENST00000405940 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
EIF2B4-202ENST00000405940 PEG3Q9GZU2 1588 aa30.66■■■□□ 2.5
EIF2B4-202ENST00000405940 MROH2BQ7Z745 1585 aa30.65■■■□□ 2.5
EIF2B4-202ENST00000405940 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
EIF2B4-202ENST00000405940 WIZO95785 1651 aa30.26■■■□□ 2.43
EIF2B4-202ENST00000405940 NESP48681 1621 aa30.26■■■□□ 2.43
EIF2B4-202ENST00000405940 ERCC6Q03468 1493 aa30.22■■■□□ 2.43
EIF2B4-202ENST00000405940 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.42
EIF2B4-202ENST00000405940 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
EIF2B4-202ENST00000405940 CUX2O14529 1486 aa30.08■■■□□ 2.41
EIF2B4-202ENST00000405940 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
EIF2B4-202ENST00000405940 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
EIF2B4-202ENST00000405940 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
EIF2B4-202ENST00000405940 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
EIF2B4-202ENST00000405940 KIF21AQ7Z4S6 1674 aa29.83■■■□□ 2.37
EIF2B4-202ENST00000405940 CFTRP13569 1480 aa29.75■■■□□ 2.35
EIF2B4-202ENST00000405940 MRC2Q9UBG0 1479 aa29.64■■■□□ 2.34
EIF2B4-202ENST00000405940 FANCD2Q9BXW9 1451 aa29.62■■■□□ 2.33
EIF2B4-202ENST00000405940 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
EIF2B4-202ENST00000405940 CCDC88BA6NC98 1476 aa29.61■■■□□ 2.33
EIF2B4-202ENST00000405940 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
EIF2B4-202ENST00000405940 WDR62O43379 1518 aa29.56■■■□□ 2.32
EIF2B4-202ENST00000405940 PRDM2Q13029 1718 aa29.38■■■□□ 2.29
EIF2B4-202ENST00000405940 URB2Q14146 1524 aaKnown RBP29.37■■■□□ 2.29
EIF2B4-202ENST00000405940 TOPBP1Q92547 1522 aa29.12■■■□□ 2.25
EIF2B4-202ENST00000405940 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
EIF2B4-202ENST00000405940 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
EIF2B4-202ENST00000405940 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
EIF2B4-202ENST00000405940 IFT140Q96RY7 1462 aa29.01■■■□□ 2.23
EIF2B4-202ENST00000405940 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
EIF2B4-202ENST00000405940 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
EIF2B4-202ENST00000405940 TARBP1Q13395 1621 aaKnown RBP28.82■■■□□ 2.2
EIF2B4-202ENST00000405940 OSCARQ8IYS5 282 aa28.79■■■□□ 2.2
EIF2B4-202ENST00000405940 CUX1P39880 1505 aa28.77■■■□□ 2.2
EIF2B4-202ENST00000405940 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
EIF2B4-202ENST00000405940 SOGA1O94964 1423 aa28.73■■■□□ 2.19
EIF2B4-202ENST00000405940 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
EIF2B4-202ENST00000405940 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.195e-13■■■■■ 68.1
EIF2B4-202ENST00000405940 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
EIF2B4-202ENST00000405940 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
EIF2B4-202ENST00000405940 WDR97A6NE52 1622 aa28.56■■■□□ 2.16
EIF2B4-202ENST00000405940 WRNQ14191 1432 aaPredicted RBP eCLIP28.45■■■□□ 2.15
EIF2B4-202ENST00000405940 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
EIF2B4-202ENST00000405940 CHD1O14646 1710 aa28.43■■■□□ 2.14
EIF2B4-202ENST00000405940 GRIN2BQ13224 1484 aa28.42■■■□□ 2.14
EIF2B4-202ENST00000405940 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
EIF2B4-202ENST00000405940 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
EIF2B4-202ENST00000405940 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
EIF2B4-202ENST00000405940 FBLN2P98095 1184 aa28.4■■■□□ 2.14
EIF2B4-202ENST00000405940 TRIM41Q8WV44 630 aa28.4■■■□□ 2.14
EIF2B4-202ENST00000405940 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
EIF2B4-202ENST00000405940 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
EIF2B4-202ENST00000405940 GAPVD1Q14C86 1478 aa28.38■■■□□ 2.13
EIF2B4-202ENST00000405940 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
EIF2B4-202ENST00000405940 RIMBP3CA6NJZ7 1639 aa28.31■■■□□ 2.12
EIF2B4-202ENST00000405940 RIMBP3BA6NNM3 1639 aa28.31■■■□□ 2.12
EIF2B4-202ENST00000405940 RIMBP3Q9UFD9 1639 aa28.31■■■□□ 2.12
EIF2B4-202ENST00000405940 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
EIF2B4-202ENST00000405940 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
EIF2B4-202ENST00000405940 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
EIF2B4-202ENST00000405940 PBRM1Q86U86 1689 aa28.27■■■□□ 2.12
EIF2B4-202ENST00000405940 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
EIF2B4-202ENST00000405940 ERICH3Q5RHP9 1530 aa28.07■■■□□ 2.08
EIF2B4-202ENST00000405940 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
EIF2B4-202ENST00000405940 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
EIF2B4-202ENST00000405940 GRIN2AQ12879 1464 aa28.05■■■□□ 2.08
EIF2B4-202ENST00000405940 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
EIF2B4-202ENST00000405940 FHAD1B1AJZ9 1412 aa28.05■■■□□ 2.08
EIF2B4-202ENST00000405940 NUP160Q12769 1436 aa27.98■■■□□ 2.07
EIF2B4-202ENST00000405940 CEP170Q5SW79 1584 aa27.92■■■□□ 2.06
EIF2B4-202ENST00000405940 KIF27Q86VH2 1401 aa27.88■■■□□ 2.05
EIF2B4-202ENST00000405940 IGF1RP08069 1367 aa27.86■■■□□ 2.05
EIF2B4-202ENST00000405940 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
EIF2B4-202ENST00000405940 ERCC6L2Q5T890 1561 aa27.75■■■□□ 2.03
EIF2B4-202ENST00000405940 CUL7Q14999 1698 aa27.71■■■□□ 2.03
EIF2B4-202ENST00000405940 JPH4Q96JJ6 628 aa27.69■■■□□ 2.02
EIF2B4-202ENST00000405940 RUSC2Q8N2Y8 1516 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms