RNA–Protein interactions for RNA: ENST00000405531.7

C12orf40-202, Transcript of chromosome 12 open reading frame 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C12orf40, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-202ENST00000405531 NISCHQ9Y2I1 1504 aa40.53■■■■■ 4.08
C12orf40-202ENST00000405531 CCDC180Q9P1Z9 1646 aa36.03■■■■□ 3.36
C12orf40-202ENST00000405531 ABCC9O60706 1549 aa35.4■■■■□ 3.26
C12orf40-202ENST00000405531 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
C12orf40-202ENST00000405531 NACADO15069 1562 aa33.87■■■■□ 3.01
C12orf40-202ENST00000405531 DCAF8L2P0C7V8 631 aa33.86■■■■□ 3.01
C12orf40-202ENST00000405531 ZCCHC6Q5VYS8 1495 aaKnown RBP33.77■■■■□ 3
C12orf40-202ENST00000405531 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
C12orf40-202ENST00000405531 DCAF1Q9Y4B6 1507 aa33.48■■■□□ 2.95
C12orf40-202ENST00000405531 UNC13AQ9UPW8 1703 aa33.24■■■□□ 2.91
C12orf40-202ENST00000405531 PABPN1Q86U42 306 aaKnown RBP eCLIP33.06■■■□□ 2.88
C12orf40-202ENST00000405531 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
C12orf40-202ENST00000405531 SCRIBQ14160 1630 aa32.95■■■□□ 2.87
C12orf40-202ENST00000405531 DNAJC5BQ9UF47 199 aa32.58■■■□□ 2.81
C12orf40-202ENST00000405531 SHROOM4Q9ULL8 1493 aa32.53■■■□□ 2.8
C12orf40-202ENST00000405531 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
C12orf40-202ENST00000405531 CC2D2AQ9P2K1 1620 aa31.99■■■□□ 2.71
C12orf40-202ENST00000405531 CECR2Q9BXF3 1484 aa31.78■■■□□ 2.68
C12orf40-202ENST00000405531 SMARCA4P51532 1647 aa31.47■■■□□ 2.63
C12orf40-202ENST00000405531 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.62
C12orf40-202ENST00000405531 ATAD2BQ9ULI0 1458 aa31.32■■■□□ 2.6
C12orf40-202ENST00000405531 MROH2BQ7Z745 1585 aa31.28■■■□□ 2.6
C12orf40-202ENST00000405531 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
C12orf40-202ENST00000405531 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
C12orf40-202ENST00000405531 PEG3Q9GZU2 1588 aa31.14■■■□□ 2.58
C12orf40-202ENST00000405531 HMGXB3Q12766 1538 aa31.13■■■□□ 2.57
C12orf40-202ENST00000405531 BAZ1BQ9UIG0 1483 aaKnown RBP31.04■■■□□ 2.56
C12orf40-202ENST00000405531 WIZO95785 1651 aa30.93■■■□□ 2.54
C12orf40-202ENST00000405531 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
C12orf40-202ENST00000405531 NESP48681 1621 aa30.64■■■□□ 2.5
C12orf40-202ENST00000405531 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
C12orf40-202ENST00000405531 ERCC6Q03468 1493 aa30.46■■■□□ 2.47
C12orf40-202ENST00000405531 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.47
C12orf40-202ENST00000405531 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
C12orf40-202ENST00000405531 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
C12orf40-202ENST00000405531 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
C12orf40-202ENST00000405531 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
C12orf40-202ENST00000405531 CFTRP13569 1480 aa30.18■■■□□ 2.42
C12orf40-202ENST00000405531 THOC2Q8NI27 1593 aaKnown RBP30.17■■■□□ 2.42
C12orf40-202ENST00000405531 CUX2O14529 1486 aa30.14■■■□□ 2.42
C12orf40-202ENST00000405531 FANCD2Q9BXW9 1451 aa30.04■■■□□ 2.4
C12orf40-202ENST00000405531 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
C12orf40-202ENST00000405531 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
C12orf40-202ENST00000405531 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
C12orf40-202ENST00000405531 PRDM2Q13029 1718 aa29.93■■■□□ 2.38
C12orf40-202ENST00000405531 WDR62O43379 1518 aa29.89■■■□□ 2.38
C12orf40-202ENST00000405531 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
C12orf40-202ENST00000405531 TOPBP1Q92547 1522 aa29.56■■■□□ 2.32
C12orf40-202ENST00000405531 DNMBPQ6XZF7 1577 aa29.51■■■□□ 2.31
C12orf40-202ENST00000405531 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
C12orf40-202ENST00000405531 IFT140Q96RY7 1462 aa29.35■■■□□ 2.29
C12orf40-202ENST00000405531 CUX1P39880 1505 aa29.34■■■□□ 2.29
C12orf40-202ENST00000405531 POLA1P09884 1462 aaPredicted RBP29.32■■■□□ 2.28
C12orf40-202ENST00000405531 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
C12orf40-202ENST00000405531 DNAJC5Q9H3Z4 198 aa29.3■■■□□ 2.28
C12orf40-202ENST00000405531 TARBP1Q13395 1621 aaKnown RBP29.26■■■□□ 2.27
C12orf40-202ENST00000405531 FGD5Q6ZNL6 1462 aa29.24■■■□□ 2.27
C12orf40-202ENST00000405531 RAD54L2Q9Y4B4 1467 aa29.21■■■□□ 2.27
C12orf40-202ENST00000405531 EIF4G3O43432 1585 aaKnown RBP29.18■■■□□ 2.26
C12orf40-202ENST00000405531 SOGA1O94964 1423 aa29.14■■■□□ 2.26
C12orf40-202ENST00000405531 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.25
C12orf40-202ENST00000405531 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.259e-6■■■■■ 50.1
C12orf40-202ENST00000405531 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
C12orf40-202ENST00000405531 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
C12orf40-202ENST00000405531 BIVM-ERCC5R4GMW8 1640 aa29.03■■■□□ 2.24
C12orf40-202ENST00000405531 TDRD9Q8NDG6 1382 aaKnown RBP29.03■■■□□ 2.24
C12orf40-202ENST00000405531 WDR97A6NE52 1622 aa29.01■■■□□ 2.24
C12orf40-202ENST00000405531 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
C12orf40-202ENST00000405531 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
C12orf40-202ENST00000405531 OSCARQ8IYS5 282 aa28.84■■■□□ 2.21
C12orf40-202ENST00000405531 SNAPC4Q5SXM2 1469 aa28.84■■■□□ 2.21
C12orf40-202ENST00000405531 GRIN2BQ13224 1484 aa28.82■■■□□ 2.2
C12orf40-202ENST00000405531 GAPVD1Q14C86 1478 aa28.82■■■□□ 2.2
C12orf40-202ENST00000405531 CHD1O14646 1710 aa28.81■■■□□ 2.2
C12orf40-202ENST00000405531 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
C12orf40-202ENST00000405531 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
C12orf40-202ENST00000405531 FBLN2P98095 1184 aa28.73■■■□□ 2.19
C12orf40-202ENST00000405531 SYNJ2O15056 1496 aa28.65■■■□□ 2.18
C12orf40-202ENST00000405531 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
C12orf40-202ENST00000405531 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
C12orf40-202ENST00000405531 ERICH3Q5RHP9 1530 aa28.56■■■□□ 2.16
C12orf40-202ENST00000405531 CLASP1Q7Z460 1538 aa28.5■■■□□ 2.15
C12orf40-202ENST00000405531 RIMBP3CA6NJZ7 1639 aa28.49■■■□□ 2.15
C12orf40-202ENST00000405531 RIMBP3BA6NNM3 1639 aa28.49■■■□□ 2.15
C12orf40-202ENST00000405531 RIMBP3Q9UFD9 1639 aa28.49■■■□□ 2.15
C12orf40-202ENST00000405531 GRIN2AQ12879 1464 aa28.48■■■□□ 2.15
C12orf40-202ENST00000405531 FHAD1B1AJZ9 1412 aa28.48■■■□□ 2.15
C12orf40-202ENST00000405531 ARHGEF11O15085 1522 aa28.47■■■□□ 2.15
C12orf40-202ENST00000405531 KIF27Q86VH2 1401 aa28.45■■■□□ 2.14
C12orf40-202ENST00000405531 CEP170Q5SW79 1584 aa28.38■■■□□ 2.13
C12orf40-202ENST00000405531 IGF1RP08069 1367 aa28.37■■■□□ 2.13
C12orf40-202ENST00000405531 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
C12orf40-202ENST00000405531 NUP160Q12769 1436 aa28.35■■■□□ 2.13
C12orf40-202ENST00000405531 CUL7Q14999 1698 aa28.28■■■□□ 2.12
C12orf40-202ENST00000405531 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
C12orf40-202ENST00000405531 ARAP1Q96P48 1450 aa28.26■■■□□ 2.11
C12orf40-202ENST00000405531 CARMIL1Q5VZK9 1371 aa28.18■■■□□ 2.1
C12orf40-202ENST00000405531 CYB5RLQ6IPT4 315 aa28.17■■■□□ 2.1
C12orf40-202ENST00000405531 ERCC6L2Q5T890 1561 aa28.16■■■□□ 2.1
C12orf40-202ENST00000405531 SHROOM2Q13796 1616 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms