RNA–Protein interactions for RNA: ENST00000405489.7

ATRAID-202, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,059 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-202ENST00000405489 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.8
ATRAID-202ENST00000405489 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
ATRAID-202ENST00000405489 ABCC9O60706 1549 aa28.48■■■□□ 2.15
ATRAID-202ENST00000405489 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.97
ATRAID-202ENST00000405489 NACADO15069 1562 aa27.32■■□□□ 1.96
ATRAID-202ENST00000405489 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
ATRAID-202ENST00000405489 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
ATRAID-202ENST00000405489 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
ATRAID-202ENST00000405489 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
ATRAID-202ENST00000405489 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
ATRAID-202ENST00000405489 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
ATRAID-202ENST00000405489 PABPN1Q86U42 306 aaKnown RBP eCLIP26.56■■□□□ 1.84
ATRAID-202ENST00000405489 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
ATRAID-202ENST00000405489 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
ATRAID-202ENST00000405489 SHROOM4Q9ULL8 1493 aa26.28■■□□□ 1.8
ATRAID-202ENST00000405489 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
ATRAID-202ENST00000405489 CC2D2AQ9P2K1 1620 aa25.81■■□□□ 1.72
ATRAID-202ENST00000405489 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
ATRAID-202ENST00000405489 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
ATRAID-202ENST00000405489 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
ATRAID-202ENST00000405489 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
ATRAID-202ENST00000405489 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
ATRAID-202ENST00000405489 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
ATRAID-202ENST00000405489 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
ATRAID-202ENST00000405489 HMGXB3Q12766 1538 aa25.06■■□□□ 1.6
ATRAID-202ENST00000405489 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
ATRAID-202ENST00000405489 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
ATRAID-202ENST00000405489 WIZO95785 1651 aa24.79■■□□□ 1.56
ATRAID-202ENST00000405489 RSF1Q96T23 1441 aaPredicted RBP24.69■■□□□ 1.54
ATRAID-202ENST00000405489 NESP48681 1621 aa24.61■■□□□ 1.53
ATRAID-202ENST00000405489 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
ATRAID-202ENST00000405489 ERCC6Q03468 1493 aa24.56■■□□□ 1.52
ATRAID-202ENST00000405489 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
ATRAID-202ENST00000405489 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
ATRAID-202ENST00000405489 CUX2O14529 1486 aa24.4■■□□□ 1.5
ATRAID-202ENST00000405489 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
ATRAID-202ENST00000405489 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
ATRAID-202ENST00000405489 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
ATRAID-202ENST00000405489 CFTRP13569 1480 aa24.26■■□□□ 1.47
ATRAID-202ENST00000405489 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
ATRAID-202ENST00000405489 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
ATRAID-202ENST00000405489 FANCD2Q9BXW9 1451 aa24.13■■□□□ 1.45
ATRAID-202ENST00000405489 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
ATRAID-202ENST00000405489 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
ATRAID-202ENST00000405489 WDR62O43379 1518 aa24.08■■□□□ 1.45
ATRAID-202ENST00000405489 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
ATRAID-202ENST00000405489 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
ATRAID-202ENST00000405489 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
ATRAID-202ENST00000405489 ABCC8Q09428 1581 aa23.78■■□□□ 1.4
ATRAID-202ENST00000405489 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
ATRAID-202ENST00000405489 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
ATRAID-202ENST00000405489 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
ATRAID-202ENST00000405489 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
ATRAID-202ENST00000405489 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
ATRAID-202ENST00000405489 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
ATRAID-202ENST00000405489 CUX1P39880 1505 aa23.49■■□□□ 1.35
ATRAID-202ENST00000405489 EIF4G3O43432 1585 aaKnown RBP23.46■■□□□ 1.35
ATRAID-202ENST00000405489 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
ATRAID-202ENST00000405489 SOGA1O94964 1423 aa23.42■■□□□ 1.34
ATRAID-202ENST00000405489 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
ATRAID-202ENST00000405489 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.332e-7■■■□□ 15.2
ATRAID-202ENST00000405489 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
ATRAID-202ENST00000405489 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
ATRAID-202ENST00000405489 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
ATRAID-202ENST00000405489 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
ATRAID-202ENST00000405489 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
ATRAID-202ENST00000405489 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
ATRAID-202ENST00000405489 CHD1O14646 1710 aa23.25■■□□□ 1.31
ATRAID-202ENST00000405489 SYNJ1O43426 1573 aa23.24■■□□□ 1.31
ATRAID-202ENST00000405489 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
ATRAID-202ENST00000405489 PBRM1Q86U86 1689 aa23.18■■□□□ 1.3
ATRAID-202ENST00000405489 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
ATRAID-202ENST00000405489 ABCA5Q8WWZ7 1642 aa23.16■■□□□ 1.3
ATRAID-202ENST00000405489 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
ATRAID-202ENST00000405489 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
ATRAID-202ENST00000405489 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
ATRAID-202ENST00000405489 FBLN2P98095 1184 aa23.1■■□□□ 1.29
ATRAID-202ENST00000405489 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
ATRAID-202ENST00000405489 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
ATRAID-202ENST00000405489 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.28
ATRAID-202ENST00000405489 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.28
ATRAID-202ENST00000405489 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.28
ATRAID-202ENST00000405489 ARHGEF11O15085 1522 aa22.97■■□□□ 1.27
ATRAID-202ENST00000405489 ERICH3Q5RHP9 1530 aa22.95■■□□□ 1.26
ATRAID-202ENST00000405489 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
ATRAID-202ENST00000405489 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
ATRAID-202ENST00000405489 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
ATRAID-202ENST00000405489 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
ATRAID-202ENST00000405489 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
ATRAID-202ENST00000405489 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
ATRAID-202ENST00000405489 NUP160Q12769 1436 aa22.78■■□□□ 1.24
ATRAID-202ENST00000405489 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
ATRAID-202ENST00000405489 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
ATRAID-202ENST00000405489 CYB5RLQ6IPT4 315 aa22.75■■□□□ 1.23
ATRAID-202ENST00000405489 CUL7Q14999 1698 aa22.74■■□□□ 1.23
ATRAID-202ENST00000405489 IGF1RP08069 1367 aa22.74■■□□□ 1.23
ATRAID-202ENST00000405489 SHROOM2Q13796 1616 aa22.68■■□□□ 1.22
ATRAID-202ENST00000405489 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
ATRAID-202ENST00000405489 CARMIL1Q5VZK9 1371 aa22.59■■□□□ 1.21
ATRAID-202ENST00000405489 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms