RNA–Protein interactions for RNA: ENST00000405431.2

PGF-202, Transcript of placental growth factor, humanhuman

TSL 5 BASIC

Gene PGF, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-202ENST00000405431 NISCHQ9Y2I1 1504 aa39.02■■■■□ 3.84
PGF-202ENST00000405431 ABCC9O60706 1549 aa35.39■■■■□ 3.26
PGF-202ENST00000405431 CCDC180Q9P1Z9 1646 aa34.94■■■■□ 3.18
PGF-202ENST00000405431 DNAJC5BQ9UF47 199 aa33.46■■■□□ 2.95
PGF-202ENST00000405431 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
PGF-202ENST00000405431 DCAF8L2P0C7V8 631 aa33.15■■■□□ 2.9
PGF-202ENST00000405431 NACADO15069 1562 aa33.04■■■□□ 2.88
PGF-202ENST00000405431 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
PGF-202ENST00000405431 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
PGF-202ENST00000405431 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
PGF-202ENST00000405431 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
PGF-202ENST00000405431 ZCCHC6Q5VYS8 1495 aaKnown RBP32.32■■■□□ 2.76
PGF-202ENST00000405431 SCRIBQ14160 1630 aa32.12■■■□□ 2.73
PGF-202ENST00000405431 DCAF1Q9Y4B6 1507 aa32.02■■■□□ 2.72
PGF-202ENST00000405431 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
PGF-202ENST00000405431 CECR2Q9BXF3 1484 aa31.76■■■□□ 2.67
PGF-202ENST00000405431 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
PGF-202ENST00000405431 SHROOM4Q9ULL8 1493 aa31.69■■■□□ 2.66
PGF-202ENST00000405431 NCAPD3P42695 1498 aa30.56■■■□□ 2.48
PGF-202ENST00000405431 ATAD2BQ9ULI0 1458 aa30.55■■■□□ 2.48
PGF-202ENST00000405431 DNAJC5Q9H3Z4 198 aa30.52■■■□□ 2.48
PGF-202ENST00000405431 SMARCA4P51532 1647 aa30.51■■■□□ 2.47
PGF-202ENST00000405431 NESP48681 1621 aa30.44■■■□□ 2.46
PGF-202ENST00000405431 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
PGF-202ENST00000405431 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
PGF-202ENST00000405431 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
PGF-202ENST00000405431 CUX2O14529 1486 aa30.25■■■□□ 2.43
PGF-202ENST00000405431 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
PGF-202ENST00000405431 BAZ1BQ9UIG0 1483 aaKnown RBP30.21■■■□□ 2.43
PGF-202ENST00000405431 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.43
PGF-202ENST00000405431 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
PGF-202ENST00000405431 THOC2Q8NI27 1593 aaKnown RBP30.01■■■□□ 2.39
PGF-202ENST00000405431 KIF21AQ7Z4S6 1674 aa29.96■■■□□ 2.39
PGF-202ENST00000405431 WIZO95785 1651 aa29.88■■■□□ 2.37
PGF-202ENST00000405431 LAMC3Q9Y6N6 1575 aa29.86■■■□□ 2.37
PGF-202ENST00000405431 CADPSQ9ULU8 1353 aa29.65■■■□□ 2.34
PGF-202ENST00000405431 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
PGF-202ENST00000405431 MRC2Q9UBG0 1479 aa29.53■■■□□ 2.32
PGF-202ENST00000405431 RSF1Q96T23 1441 aaPredicted RBP29.46■■■□□ 2.31
PGF-202ENST00000405431 WDR62O43379 1518 aa29.46■■■□□ 2.31
PGF-202ENST00000405431 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
PGF-202ENST00000405431 CEP164Q9UPV0 1460 aa29.37■■■□□ 2.29
PGF-202ENST00000405431 TOP2AP11388 1531 aaKnown RBP29.31■■■□□ 2.28
PGF-202ENST00000405431 TRIM41Q8WV44 630 aa29.31■■■□□ 2.28
PGF-202ENST00000405431 CFTRP13569 1480 aa29.29■■■□□ 2.28
PGF-202ENST00000405431 URB2Q14146 1524 aaKnown RBP29.25■■■□□ 2.27
PGF-202ENST00000405431 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
PGF-202ENST00000405431 PRDM2Q13029 1718 aa28.98■■■□□ 2.23
PGF-202ENST00000405431 ZNF608Q9ULD9 1512 aaPredicted RBP28.98■■■□□ 2.23
PGF-202ENST00000405431 OSCARQ8IYS5 282 aa28.89■■■□□ 2.22
PGF-202ENST00000405431 TOPBP1Q92547 1522 aa28.84■■■□□ 2.21
PGF-202ENST00000405431 IFT140Q96RY7 1462 aa28.74■■■□□ 2.19
PGF-202ENST00000405431 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
PGF-202ENST00000405431 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
PGF-202ENST00000405431 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
PGF-202ENST00000405431 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
PGF-202ENST00000405431 DNMBPQ6XZF7 1577 aa28.66■■■□□ 2.18
PGF-202ENST00000405431 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.186e-7■■■■□ 24.6
PGF-202ENST00000405431 TARBP1Q13395 1621 aaKnown RBP28.61■■■□□ 2.17
PGF-202ENST00000405431 RAD54L2Q9Y4B4 1467 aa28.58■■■□□ 2.17
PGF-202ENST00000405431 ARHGEF11O15085 1522 aa28.57■■■□□ 2.16
PGF-202ENST00000405431 CHD1O14646 1710 aa28.57■■■□□ 2.16
PGF-202ENST00000405431 POLA1P09884 1462 aaPredicted RBP28.54■■■□□ 2.16
PGF-202ENST00000405431 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
PGF-202ENST00000405431 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
PGF-202ENST00000405431 FBLN2P98095 1184 aa28.44■■■□□ 2.14
PGF-202ENST00000405431 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
PGF-202ENST00000405431 CUX1P39880 1505 aa28.38■■■□□ 2.13
PGF-202ENST00000405431 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
PGF-202ENST00000405431 SOGA1O94964 1423 aa28.35■■■□□ 2.13
PGF-202ENST00000405431 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
PGF-202ENST00000405431 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
PGF-202ENST00000405431 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
PGF-202ENST00000405431 WDR97A6NE52 1622 aa28.17■■■□□ 2.1
PGF-202ENST00000405431 CLASP1Q7Z460 1538 aa28.15■■■□□ 2.1
PGF-202ENST00000405431 TRHP20396 242 aaPredicted RBP28.09■■■□□ 2.09
PGF-202ENST00000405431 PBRM1Q86U86 1689 aa28.08■■■□□ 2.09
PGF-202ENST00000405431 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
PGF-202ENST00000405431 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
PGF-202ENST00000405431 MAGI1Q96QZ7 1491 aaPredicted RBP28.03■■■□□ 2.08
PGF-202ENST00000405431 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.07
PGF-202ENST00000405431 SYNJ2O15056 1496 aa28■■■□□ 2.07
PGF-202ENST00000405431 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
PGF-202ENST00000405431 ABCA5Q8WWZ7 1642 aa27.97■■■□□ 2.07
PGF-202ENST00000405431 ERCC6L2Q5T890 1561 aa27.94■■■□□ 2.06
PGF-202ENST00000405431 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
PGF-202ENST00000405431 CEP170Q5SW79 1584 aa27.8■■■□□ 2.04
PGF-202ENST00000405431 ADAMTS12P58397 1594 aa27.78■■■□□ 2.04
PGF-202ENST00000405431 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
PGF-202ENST00000405431 GRIN2AQ12879 1464 aa27.77■■■□□ 2.04
PGF-202ENST00000405431 TOP2BQ02880 1626 aa27.75■■■□□ 2.03
PGF-202ENST00000405431 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
PGF-202ENST00000405431 NUP160Q12769 1436 aa27.67■■■□□ 2.02
PGF-202ENST00000405431 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2.01
PGF-202ENST00000405431 SHROOM2Q13796 1616 aa27.57■■■□□ 2
PGF-202ENST00000405431 ERICH3Q5RHP9 1530 aa27.51■■■□□ 2
PGF-202ENST00000405431 PRG4Q92954 1404 aaPredicted RBP27.46■■□□□ 1.99
PGF-202ENST00000405431 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
PGF-202ENST00000405431 KIF13AQ9H1H9 1805 aa27.38■■□□□ 1.97
PGF-202ENST00000405431 JPH4Q96JJ6 628 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms