RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
CGREF1-205ENST00000404694 CCDC180Q9P1Z9 1646 aa36.05■■■■□ 3.36
CGREF1-205ENST00000404694 ABCC9O60706 1549 aa35.42■■■■□ 3.26
CGREF1-205ENST00000404694 RB1CC1Q8TDY2 1594 aa34■■■■□ 3.03
CGREF1-205ENST00000404694 NACADO15069 1562 aa33.91■■■■□ 3.02
CGREF1-205ENST00000404694 DCAF8L2P0C7V8 631 aa33.75■■■□□ 2.99
CGREF1-205ENST00000404694 MYO15BQ96JP2 1530 aa33.65■■■□□ 2.98
CGREF1-205ENST00000404694 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
CGREF1-205ENST00000404694 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
CGREF1-205ENST00000404694 UNC13AQ9UPW8 1703 aa33.29■■■□□ 2.92
CGREF1-205ENST00000404694 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
CGREF1-205ENST00000404694 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.87
CGREF1-205ENST00000404694 SCRIBQ14160 1630 aa32.86■■■□□ 2.85
CGREF1-205ENST00000404694 DNAJC5BQ9UF47 199 aa32.67■■■□□ 2.82
CGREF1-205ENST00000404694 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
CGREF1-205ENST00000404694 EIF4G1Q04637 1599 aaKnown RBP32.14■■■□□ 2.74
CGREF1-205ENST00000404694 CC2D2AQ9P2K1 1620 aa32.06■■■□□ 2.72
CGREF1-205ENST00000404694 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
CGREF1-205ENST00000404694 SMARCA4P51532 1647 aa31.42■■■□□ 2.62
CGREF1-205ENST00000404694 BAZ1AQ9NRL2 1556 aaPredicted RBP31.33■■■□□ 2.61
CGREF1-205ENST00000404694 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
CGREF1-205ENST00000404694 ATAD2BQ9ULI0 1458 aa31.27■■■□□ 2.6
CGREF1-205ENST00000404694 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
CGREF1-205ENST00000404694 MROH2BQ7Z745 1585 aa31.14■■■□□ 2.58
CGREF1-205ENST00000404694 HMGXB3Q12766 1538 aa31.13■■■□□ 2.57
CGREF1-205ENST00000404694 PEG3Q9GZU2 1588 aa31.11■■■□□ 2.57
CGREF1-205ENST00000404694 BAZ1BQ9UIG0 1483 aaKnown RBP31■■■□□ 2.55
CGREF1-205ENST00000404694 WIZO95785 1651 aa30.81■■■□□ 2.52
CGREF1-205ENST00000404694 RSF1Q96T23 1441 aaPredicted RBP30.69■■■□□ 2.5
CGREF1-205ENST00000404694 NESP48681 1621 aa30.61■■■□□ 2.49
CGREF1-205ENST00000404694 ERCC6Q03468 1493 aa30.54■■■□□ 2.48
CGREF1-205ENST00000404694 LAMC3Q9Y6N6 1575 aa30.51■■■□□ 2.47
CGREF1-205ENST00000404694 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
CGREF1-205ENST00000404694 CADPSQ9ULU8 1353 aa30.34■■■□□ 2.45
CGREF1-205ENST00000404694 CUX2O14529 1486 aa30.31■■■□□ 2.44
CGREF1-205ENST00000404694 KIF21AQ7Z4S6 1674 aa30.28■■■□□ 2.44
CGREF1-205ENST00000404694 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
CGREF1-205ENST00000404694 THOC2Q8NI27 1593 aaKnown RBP30.23■■■□□ 2.43
CGREF1-205ENST00000404694 CFTRP13569 1480 aa30.14■■■□□ 2.42
CGREF1-205ENST00000404694 CCDC88BA6NC98 1476 aa30.08■■■□□ 2.41
CGREF1-205ENST00000404694 FANCD2Q9BXW9 1451 aa30.01■■■□□ 2.39
CGREF1-205ENST00000404694 MRC2Q9UBG0 1479 aa30■■■□□ 2.39
CGREF1-205ENST00000404694 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
CGREF1-205ENST00000404694 PRDM2Q13029 1718 aa29.96■■■□□ 2.39
CGREF1-205ENST00000404694 WDR62O43379 1518 aa29.93■■■□□ 2.38
CGREF1-205ENST00000404694 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
CGREF1-205ENST00000404694 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
CGREF1-205ENST00000404694 DNAJC5Q9H3Z4 198 aa29.56■■■□□ 2.32
CGREF1-205ENST00000404694 TOPBP1Q92547 1522 aa29.51■■■□□ 2.32
CGREF1-205ENST00000404694 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
CGREF1-205ENST00000404694 DNMBPQ6XZF7 1577 aa29.48■■■□□ 2.31
CGREF1-205ENST00000404694 IFT140Q96RY7 1462 aa29.37■■■□□ 2.29
CGREF1-205ENST00000404694 ZNF608Q9ULD9 1512 aaPredicted RBP29.27■■■□□ 2.28
CGREF1-205ENST00000404694 POLA1P09884 1462 aaPredicted RBP29.26■■■□□ 2.27
CGREF1-205ENST00000404694 TARBP1Q13395 1621 aaKnown RBP29.24■■■□□ 2.27
CGREF1-205ENST00000404694 CUX1P39880 1505 aa29.23■■■□□ 2.27
CGREF1-205ENST00000404694 EIF4G3O43432 1585 aaKnown RBP29.18■■■□□ 2.26
CGREF1-205ENST00000404694 FGD5Q6ZNL6 1462 aa29.16■■■□□ 2.26
CGREF1-205ENST00000404694 RAD54L2Q9Y4B4 1467 aa29.12■■■□□ 2.25
CGREF1-205ENST00000404694 SOGA1O94964 1423 aa29.1■■■□□ 2.25
CGREF1-205ENST00000404694 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.24
CGREF1-205ENST00000404694 WDR97A6NE52 1622 aa28.99■■■□□ 2.23
CGREF1-205ENST00000404694 TDRD9Q8NDG6 1382 aaKnown RBP28.96■■■□□ 2.23
CGREF1-205ENST00000404694 OSCARQ8IYS5 282 aa28.95■■■□□ 2.22
CGREF1-205ENST00000404694 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.22
CGREF1-205ENST00000404694 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
CGREF1-205ENST00000404694 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
CGREF1-205ENST00000404694 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
CGREF1-205ENST00000404694 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
CGREF1-205ENST00000404694 CHD1O14646 1710 aa28.85■■■□□ 2.21
CGREF1-205ENST00000404694 SNAPC4Q5SXM2 1469 aa28.81■■■□□ 2.2
CGREF1-205ENST00000404694 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
CGREF1-205ENST00000404694 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
CGREF1-205ENST00000404694 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
CGREF1-205ENST00000404694 GAPVD1Q14C86 1478 aa28.78■■■□□ 2.2
CGREF1-205ENST00000404694 MAGI1Q96QZ7 1491 aaPredicted RBP28.76■■■□□ 2.19
CGREF1-205ENST00000404694 FBLN2P98095 1184 aa28.71■■■□□ 2.19
CGREF1-205ENST00000404694 SYNJ2O15056 1496 aa28.65■■■□□ 2.18
CGREF1-205ENST00000404694 CHMP7Q8WUX9 453 aaPredicted RBP28.6■■■□□ 2.17
CGREF1-205ENST00000404694 RIMBP3CA6NJZ7 1639 aa28.59■■■□□ 2.17
CGREF1-205ENST00000404694 RIMBP3BA6NNM3 1639 aa28.59■■■□□ 2.17
CGREF1-205ENST00000404694 RIMBP3Q9UFD9 1639 aa28.59■■■□□ 2.17
CGREF1-205ENST00000404694 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
CGREF1-205ENST00000404694 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
CGREF1-205ENST00000404694 CLASP1Q7Z460 1538 aa28.52■■■□□ 2.16
CGREF1-205ENST00000404694 ERICH3Q5RHP9 1530 aa28.51■■■□□ 2.16
CGREF1-205ENST00000404694 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
CGREF1-205ENST00000404694 GRIN2AQ12879 1464 aa28.45■■■□□ 2.14
CGREF1-205ENST00000404694 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
CGREF1-205ENST00000404694 KIF27Q86VH2 1401 aa28.34■■■□□ 2.13
CGREF1-205ENST00000404694 CEP170Q5SW79 1584 aa28.34■■■□□ 2.13
CGREF1-205ENST00000404694 NUP160Q12769 1436 aa28.32■■■□□ 2.12
CGREF1-205ENST00000404694 ARAP1Q96P48 1450 aa28.31■■■□□ 2.12
CGREF1-205ENST00000404694 CUL7Q14999 1698 aa28.24■■■□□ 2.11
CGREF1-205ENST00000404694 IGF1RP08069 1367 aa28.24■■■□□ 2.11
CGREF1-205ENST00000404694 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
CGREF1-205ENST00000404694 SHROOM2Q13796 1616 aa28.16■■■□□ 2.1
CGREF1-205ENST00000404694 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
CGREF1-205ENST00000404694 ERCC6L2Q5T890 1561 aa28.11■■■□□ 2.09
CGREF1-205ENST00000404694 CARMIL1Q5VZK9 1371 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms