RNA–Protein interactions for RNA: ENST00000404473.6

ACSM6-204, Transcript of acyl-CoA synthetase medium chain family member 6, humanhuman

TSL 1 (best)

Gene ACSM6, Length 1,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM6-204ENST00000404473 NISCHQ9Y2I1 1504 aa22.94■■□□□ 1.26
ACSM6-204ENST00000404473 ABCC9O60706 1549 aa20.47■□□□□ 0.87
ACSM6-204ENST00000404473 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
ACSM6-204ENST00000404473 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
ACSM6-204ENST00000404473 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.69
ACSM6-204ENST00000404473 NACADO15069 1562 aa19.27■□□□□ 0.68
ACSM6-204ENST00000404473 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
ACSM6-204ENST00000404473 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
ACSM6-204ENST00000404473 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
ACSM6-204ENST00000404473 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
ACSM6-204ENST00000404473 ZCCHC6Q5VYS8 1495 aaKnown RBP19.06■□□□□ 0.64
ACSM6-204ENST00000404473 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
ACSM6-204ENST00000404473 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
ACSM6-204ENST00000404473 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
ACSM6-204ENST00000404473 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
ACSM6-204ENST00000404473 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
ACSM6-204ENST00000404473 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
ACSM6-204ENST00000404473 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
ACSM6-204ENST00000404473 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
ACSM6-204ENST00000404473 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
ACSM6-204ENST00000404473 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
ACSM6-204ENST00000404473 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.43
ACSM6-204ENST00000404473 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
ACSM6-204ENST00000404473 NESP48681 1621 aa17.7■□□□□ 0.42
ACSM6-204ENST00000404473 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
ACSM6-204ENST00000404473 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
ACSM6-204ENST00000404473 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
ACSM6-204ENST00000404473 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
ACSM6-204ENST00000404473 WIZO95785 1651 aa17.51■□□□□ 0.39
ACSM6-204ENST00000404473 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
ACSM6-204ENST00000404473 CUX2O14529 1486 aa17.47■□□□□ 0.39
ACSM6-204ENST00000404473 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
ACSM6-204ENST00000404473 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
ACSM6-204ENST00000404473 RSF1Q96T23 1441 aaPredicted RBP17.41■□□□□ 0.38
ACSM6-204ENST00000404473 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
ACSM6-204ENST00000404473 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
ACSM6-204ENST00000404473 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
ACSM6-204ENST00000404473 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
ACSM6-204ENST00000404473 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
ACSM6-204ENST00000404473 CFTRP13569 1480 aa17.18■□□□□ 0.34
ACSM6-204ENST00000404473 WDR62O43379 1518 aa17.17■□□□□ 0.34
ACSM6-204ENST00000404473 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
ACSM6-204ENST00000404473 FANCD2Q9BXW9 1451 aa17.13■□□□□ 0.33
ACSM6-204ENST00000404473 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
ACSM6-204ENST00000404473 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
ACSM6-204ENST00000404473 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
ACSM6-204ENST00000404473 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
ACSM6-204ENST00000404473 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
ACSM6-204ENST00000404473 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
ACSM6-204ENST00000404473 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
ACSM6-204ENST00000404473 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
ACSM6-204ENST00000404473 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
ACSM6-204ENST00000404473 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
ACSM6-204ENST00000404473 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
ACSM6-204ENST00000404473 EIF4G3O43432 1585 aaKnown RBP16.69■□□□□ 0.26
ACSM6-204ENST00000404473 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
ACSM6-204ENST00000404473 CUX1P39880 1505 aa16.66■□□□□ 0.26
ACSM6-204ENST00000404473 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
ACSM6-204ENST00000404473 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
ACSM6-204ENST00000404473 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
ACSM6-204ENST00000404473 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
ACSM6-204ENST00000404473 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
ACSM6-204ENST00000404473 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
ACSM6-204ENST00000404473 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
ACSM6-204ENST00000404473 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
ACSM6-204ENST00000404473 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
ACSM6-204ENST00000404473 SOGA1O94964 1423 aa16.55■□□□□ 0.24
ACSM6-204ENST00000404473 CHD1O14646 1710 aa16.52■□□□□ 0.24
ACSM6-204ENST00000404473 ARHGEF11O15085 1522 aa16.52■□□□□ 0.23
ACSM6-204ENST00000404473 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
ACSM6-204ENST00000404473 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
ACSM6-204ENST00000404473 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
ACSM6-204ENST00000404473 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
ACSM6-204ENST00000404473 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
ACSM6-204ENST00000404473 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
ACSM6-204ENST00000404473 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
ACSM6-204ENST00000404473 FBLN2P98095 1184 aa16.38■□□□□ 0.21
ACSM6-204ENST00000404473 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
ACSM6-204ENST00000404473 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
ACSM6-204ENST00000404473 MAGI1Q96QZ7 1491 aaPredicted RBP16.34■□□□□ 0.21
ACSM6-204ENST00000404473 TOP2BQ02880 1626 aa16.32■□□□□ 0.2
ACSM6-204ENST00000404473 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
ACSM6-204ENST00000404473 CYB5RLQ6IPT4 315 aa16.32■□□□□ 0.2
ACSM6-204ENST00000404473 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
ACSM6-204ENST00000404473 PBRM1Q86U86 1689 aa16.32■□□□□ 0.2
ACSM6-204ENST00000404473 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
ACSM6-204ENST00000404473 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
ACSM6-204ENST00000404473 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
ACSM6-204ENST00000404473 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
ACSM6-204ENST00000404473 CEP170Q5SW79 1584 aa16.23■□□□□ 0.19
ACSM6-204ENST00000404473 NUP160Q12769 1436 aa16.2■□□□□ 0.18
ACSM6-204ENST00000404473 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
ACSM6-204ENST00000404473 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
ACSM6-204ENST00000404473 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
ACSM6-204ENST00000404473 SHROOM2Q13796 1616 aa16.11■□□□□ 0.17
ACSM6-204ENST00000404473 IGF1RP08069 1367 aa16.06■□□□□ 0.16
ACSM6-204ENST00000404473 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.15
ACSM6-204ENST00000404473 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
ACSM6-204ENST00000404473 PRG4Q92954 1404 aaPredicted RBP15.98■□□□□ 0.15
ACSM6-204ENST00000404473 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms