RNA–Protein interactions for RNA: ENST00000403974.6

PMS2CL-202, Transcript of PMS2 C-terminal like pseudogene, humanhuman

BASIC

Gene PMS2CL, Length 1,529 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-202ENST00000403974 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.31
PMS2CL-202ENST00000403974 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
PMS2CL-202ENST00000403974 ABCC9O60706 1549 aa25.5■■□□□ 1.67
PMS2CL-202ENST00000403974 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
PMS2CL-202ENST00000403974 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
PMS2CL-202ENST00000403974 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
PMS2CL-202ENST00000403974 NACADO15069 1562 aa24.54■■□□□ 1.52
PMS2CL-202ENST00000403974 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
PMS2CL-202ENST00000403974 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
PMS2CL-202ENST00000403974 UNC13AQ9UPW8 1703 aa23.97■■□□□ 1.43
PMS2CL-202ENST00000403974 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
PMS2CL-202ENST00000403974 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
PMS2CL-202ENST00000403974 BICRAQ9NZM4 1560 aa23.77■■□□□ 1.4
PMS2CL-202ENST00000403974 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
PMS2CL-202ENST00000403974 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
PMS2CL-202ENST00000403974 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
PMS2CL-202ENST00000403974 CC2D2AQ9P2K1 1620 aa23.03■■□□□ 1.28
PMS2CL-202ENST00000403974 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
PMS2CL-202ENST00000403974 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
PMS2CL-202ENST00000403974 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
PMS2CL-202ENST00000403974 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
PMS2CL-202ENST00000403974 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
PMS2CL-202ENST00000403974 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
PMS2CL-202ENST00000403974 NCAPD3P42695 1498 aa22.64■■□□□ 1.22
PMS2CL-202ENST00000403974 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.2
PMS2CL-202ENST00000403974 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
PMS2CL-202ENST00000403974 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
PMS2CL-202ENST00000403974 WIZO95785 1651 aa22.55■■□□□ 1.2
PMS2CL-202ENST00000403974 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
PMS2CL-202ENST00000403974 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
PMS2CL-202ENST00000403974 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
PMS2CL-202ENST00000403974 NESP48681 1621 aa22.1■■□□□ 1.13
PMS2CL-202ENST00000403974 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
PMS2CL-202ENST00000403974 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
PMS2CL-202ENST00000403974 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
PMS2CL-202ENST00000403974 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
PMS2CL-202ENST00000403974 CFTRP13569 1480 aa21.91■■□□□ 1.1
PMS2CL-202ENST00000403974 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
PMS2CL-202ENST00000403974 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
PMS2CL-202ENST00000403974 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
PMS2CL-202ENST00000403974 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
PMS2CL-202ENST00000403974 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
PMS2CL-202ENST00000403974 THOC2Q8NI27 1593 aaKnown RBP21.66■■□□□ 1.06
PMS2CL-202ENST00000403974 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
PMS2CL-202ENST00000403974 CUX2O14529 1486 aa21.6■■□□□ 1.05
PMS2CL-202ENST00000403974 WDR62O43379 1518 aa21.55■■□□□ 1.04
PMS2CL-202ENST00000403974 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
PMS2CL-202ENST00000403974 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
PMS2CL-202ENST00000403974 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
PMS2CL-202ENST00000403974 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
PMS2CL-202ENST00000403974 CUX1P39880 1505 aa21.35■■□□□ 1.01
PMS2CL-202ENST00000403974 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
PMS2CL-202ENST00000403974 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
PMS2CL-202ENST00000403974 IFT140Q96RY7 1462 aa21.27■■□□□ 1
PMS2CL-202ENST00000403974 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
PMS2CL-202ENST00000403974 SOGA1O94964 1423 aa21.23■□□□□ 0.99
PMS2CL-202ENST00000403974 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
PMS2CL-202ENST00000403974 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
PMS2CL-202ENST00000403974 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
PMS2CL-202ENST00000403974 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
PMS2CL-202ENST00000403974 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
PMS2CL-202ENST00000403974 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
PMS2CL-202ENST00000403974 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
PMS2CL-202ENST00000403974 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.97
PMS2CL-202ENST00000403974 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
PMS2CL-202ENST00000403974 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
PMS2CL-202ENST00000403974 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
PMS2CL-202ENST00000403974 TRIM41Q8WV44 630 aa21■□□□□ 0.95
PMS2CL-202ENST00000403974 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
PMS2CL-202ENST00000403974 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
PMS2CL-202ENST00000403974 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
PMS2CL-202ENST00000403974 FBLN2P98095 1184 aa20.9■□□□□ 0.94
PMS2CL-202ENST00000403974 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
PMS2CL-202ENST00000403974 PBRM1Q86U86 1689 aa20.89■□□□□ 0.93
PMS2CL-202ENST00000403974 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
PMS2CL-202ENST00000403974 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
PMS2CL-202ENST00000403974 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
PMS2CL-202ENST00000403974 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.92
PMS2CL-202ENST00000403974 OSCARQ8IYS5 282 aa20.82■□□□□ 0.92
PMS2CL-202ENST00000403974 CHD1O14646 1710 aa20.79■□□□□ 0.92
PMS2CL-202ENST00000403974 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
PMS2CL-202ENST00000403974 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
PMS2CL-202ENST00000403974 SYNJ2O15056 1496 aa20.76■□□□□ 0.91
PMS2CL-202ENST00000403974 IGF1RP08069 1367 aa20.73■□□□□ 0.91
PMS2CL-202ENST00000403974 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
PMS2CL-202ENST00000403974 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
PMS2CL-202ENST00000403974 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
PMS2CL-202ENST00000403974 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
PMS2CL-202ENST00000403974 CUL7Q14999 1698 aa20.63■□□□□ 0.89
PMS2CL-202ENST00000403974 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
PMS2CL-202ENST00000403974 FAM9AQ8IZU1 332 aaPredicted RBP20.61■□□□□ 0.89
PMS2CL-202ENST00000403974 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
PMS2CL-202ENST00000403974 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
PMS2CL-202ENST00000403974 NUP160Q12769 1436 aa20.53■□□□□ 0.88
PMS2CL-202ENST00000403974 EEA1Q15075 1411 aa20.53■□□□□ 0.88
PMS2CL-202ENST00000403974 CLASP1Q7Z460 1538 aa20.52■□□□□ 0.88
PMS2CL-202ENST00000403974 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
PMS2CL-202ENST00000403974 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
PMS2CL-202ENST00000403974 ARHGEF11O15085 1522 aa20.42■□□□□ 0.86
PMS2CL-202ENST00000403974 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms