RNA–Protein interactions for RNA: ENST00000403821.6

R3HDM2-205, Transcript of R3H domain containing 2, humanhuman

TSL 5 BASIC

Gene R3HDM2, Length 3,347 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-205ENST00000403821 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
R3HDM2-205ENST00000403821 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
R3HDM2-205ENST00000403821 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
R3HDM2-205ENST00000403821 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
R3HDM2-205ENST00000403821 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
R3HDM2-205ENST00000403821 ABCC9O60706 1549 aa18.81■□□□□ 0.6
R3HDM2-205ENST00000403821 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
R3HDM2-205ENST00000403821 HRCP23327 699 aa18.46■□□□□ 0.55
R3HDM2-205ENST00000403821 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
R3HDM2-205ENST00000403821 PCGF6Q9BYE7 350 aa18.31■□□□□ 0.52
R3HDM2-205ENST00000403821 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
R3HDM2-205ENST00000403821 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
R3HDM2-205ENST00000403821 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
R3HDM2-205ENST00000403821 NACADO15069 1562 aa18.15■□□□□ 0.5
R3HDM2-205ENST00000403821 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
R3HDM2-205ENST00000403821 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
R3HDM2-205ENST00000403821 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
R3HDM2-205ENST00000403821 LOC105371045A0A1W2PR82 267 aa17.86■□□□□ 0.45
R3HDM2-205ENST00000403821 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
R3HDM2-205ENST00000403821 UNC13AQ9UPW8 1703 aa17.79■□□□□ 0.44
R3HDM2-205ENST00000403821 TRIM26Q12899 539 aaPredicted RBP17.71■□□□□ 0.43
R3HDM2-205ENST00000403821 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
R3HDM2-205ENST00000403821 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
R3HDM2-205ENST00000403821 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
R3HDM2-205ENST00000403821 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.39
R3HDM2-205ENST00000403821 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
R3HDM2-205ENST00000403821 WIZO95785 1651 aa17.5■□□□□ 0.39
R3HDM2-205ENST00000403821 FAM9AQ8IZU1 332 aaPredicted RBP17.41■□□□□ 0.38
R3HDM2-205ENST00000403821 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
R3HDM2-205ENST00000403821 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.38
R3HDM2-205ENST00000403821 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
R3HDM2-205ENST00000403821 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
R3HDM2-205ENST00000403821 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
R3HDM2-205ENST00000403821 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
R3HDM2-205ENST00000403821 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
R3HDM2-205ENST00000403821 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
R3HDM2-205ENST00000403821 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
R3HDM2-205ENST00000403821 CCER1Q8TC90 406 aaPredicted RBP17.07■□□□□ 0.32
R3HDM2-205ENST00000403821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
R3HDM2-205ENST00000403821 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
R3HDM2-205ENST00000403821 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
R3HDM2-205ENST00000403821 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
R3HDM2-205ENST00000403821 MYT1Q01538 1121 aa17■□□□□ 0.31
R3HDM2-205ENST00000403821 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
R3HDM2-205ENST00000403821 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
R3HDM2-205ENST00000403821 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
R3HDM2-205ENST00000403821 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
R3HDM2-205ENST00000403821 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
R3HDM2-205ENST00000403821 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
R3HDM2-205ENST00000403821 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
R3HDM2-205ENST00000403821 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
R3HDM2-205ENST00000403821 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
R3HDM2-205ENST00000403821 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
R3HDM2-205ENST00000403821 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
R3HDM2-205ENST00000403821 YTHDC1Q96MU7 727 aaKnown RBP16.72■□□□□ 0.27
R3HDM2-205ENST00000403821 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
R3HDM2-205ENST00000403821 SOGA1O94964 1423 aa16.63■□□□□ 0.25
R3HDM2-205ENST00000403821 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
R3HDM2-205ENST00000403821 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
R3HDM2-205ENST00000403821 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
R3HDM2-205ENST00000403821 NESP48681 1621 aa16.56■□□□□ 0.24
R3HDM2-205ENST00000403821 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
R3HDM2-205ENST00000403821 CFTRP13569 1480 aa16.54■□□□□ 0.24
R3HDM2-205ENST00000403821 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
R3HDM2-205ENST00000403821 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
R3HDM2-205ENST00000403821 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
R3HDM2-205ENST00000403821 MIER1Q8N108 512 aa16.46■□□□□ 0.23
R3HDM2-205ENST00000403821 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
R3HDM2-205ENST00000403821 CUX1P39880 1505 aa16.43■□□□□ 0.22
R3HDM2-205ENST00000403821 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
R3HDM2-205ENST00000403821 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
R3HDM2-205ENST00000403821 FANCD2Q9BXW9 1451 aa16.37■□□□□ 0.21
R3HDM2-205ENST00000403821 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
R3HDM2-205ENST00000403821 APLP2Q06481 763 aa16.3■□□□□ 0.2
R3HDM2-205ENST00000403821 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
R3HDM2-205ENST00000403821 PRDM2Q13029 1718 aa16.27■□□□□ 0.19
R3HDM2-205ENST00000403821 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
R3HDM2-205ENST00000403821 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
R3HDM2-205ENST00000403821 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
R3HDM2-205ENST00000403821 EEA1Q15075 1411 aa16.22■□□□□ 0.19
R3HDM2-205ENST00000403821 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
R3HDM2-205ENST00000403821 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
R3HDM2-205ENST00000403821 CUX2O14529 1486 aa16.2■□□□□ 0.18
R3HDM2-205ENST00000403821 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
R3HDM2-205ENST00000403821 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
R3HDM2-205ENST00000403821 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
R3HDM2-205ENST00000403821 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
R3HDM2-205ENST00000403821 PDS5BQ9NTI5 1447 aa16.17■□□□□ 0.18
R3HDM2-205ENST00000403821 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
R3HDM2-205ENST00000403821 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
R3HDM2-205ENST00000403821 CLIP1P30622 1438 aa16.14■□□□□ 0.17
R3HDM2-205ENST00000403821 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
R3HDM2-205ENST00000403821 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
R3HDM2-205ENST00000403821 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
R3HDM2-205ENST00000403821 IGF1RP08069 1367 aa16.09■□□□□ 0.17
R3HDM2-205ENST00000403821 KIF21BO75037 1637 aa16.07■□□□□ 0.16
R3HDM2-205ENST00000403821 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
R3HDM2-205ENST00000403821 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
R3HDM2-205ENST00000403821 VPS8Q8N3P4 1428 aa16.04■□□□□ 0.16
R3HDM2-205ENST00000403821 ERCC6Q03468 1493 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms