RNA–Protein interactions for RNA: ENST00000402237.1

RPSAP43-201, Transcript of ribosomal protein SA pseudogene 43, humanhuman

BASIC

Gene RPSAP43, Length 625 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP43-201ENST00000402237 NISCHQ9Y2I1 1504 aa42.56■■■■■ 4.4
RPSAP43-201ENST00000402237 ABCC9O60706 1549 aa38.33■■■■□ 3.73
RPSAP43-201ENST00000402237 CCDC180Q9P1Z9 1646 aa38.24■■■■□ 3.71
RPSAP43-201ENST00000402237 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
RPSAP43-201ENST00000402237 NACADO15069 1562 aa36.18■■■■□ 3.38
RPSAP43-201ENST00000402237 DNAJC5BQ9UF47 199 aa36.13■■■■□ 3.37
RPSAP43-201ENST00000402237 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
RPSAP43-201ENST00000402237 UNC13AQ9UPW8 1703 aa35.69■■■■□ 3.3
RPSAP43-201ENST00000402237 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
RPSAP43-201ENST00000402237 MYO15BQ96JP2 1530 aa35.66■■■■□ 3.3
RPSAP43-201ENST00000402237 BICRAQ9NZM4 1560 aa35.43■■■■□ 3.26
RPSAP43-201ENST00000402237 ZCCHC6Q5VYS8 1495 aaKnown RBP35.24■■■■□ 3.23
RPSAP43-201ENST00000402237 DCAF1Q9Y4B6 1507 aa35.16■■■■□ 3.22
RPSAP43-201ENST00000402237 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
RPSAP43-201ENST00000402237 SCRIBQ14160 1630 aa34.81■■■■□ 3.16
RPSAP43-201ENST00000402237 CC2D2AQ9P2K1 1620 aa34.65■■■■□ 3.14
RPSAP43-201ENST00000402237 CECR2Q9BXF3 1484 aa34.55■■■■□ 3.12
RPSAP43-201ENST00000402237 EIF4G1Q04637 1599 aaKnown RBP34.54■■■■□ 3.12
RPSAP43-201ENST00000402237 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
RPSAP43-201ENST00000402237 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
RPSAP43-201ENST00000402237 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
RPSAP43-201ENST00000402237 SMARCA4P51532 1647 aa33.22■■■□□ 2.91
RPSAP43-201ENST00000402237 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
RPSAP43-201ENST00000402237 HMGXB3Q12766 1538 aa33.14■■■□□ 2.9
RPSAP43-201ENST00000402237 CUX2O14529 1486 aa33.09■■■□□ 2.89
RPSAP43-201ENST00000402237 ERCC6Q03468 1493 aa33.07■■■□□ 2.88
RPSAP43-201ENST00000402237 BAZ1AQ9NRL2 1556 aaPredicted RBP33.03■■■□□ 2.88
RPSAP43-201ENST00000402237 BAZ1BQ9UIG0 1483 aaKnown RBP32.93■■■□□ 2.86
RPSAP43-201ENST00000402237 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
RPSAP43-201ENST00000402237 NESP48681 1621 aa32.92■■■□□ 2.86
RPSAP43-201ENST00000402237 MROH2BQ7Z745 1585 aa32.8■■■□□ 2.84
RPSAP43-201ENST00000402237 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
RPSAP43-201ENST00000402237 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
RPSAP43-201ENST00000402237 KIF21AQ7Z4S6 1674 aa32.5■■■□□ 2.79
RPSAP43-201ENST00000402237 PDS5BQ9NTI5 1447 aa32.46■■■□□ 2.79
RPSAP43-201ENST00000402237 WIZO95785 1651 aa32.4■■■□□ 2.78
RPSAP43-201ENST00000402237 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
RPSAP43-201ENST00000402237 MRC2Q9UBG0 1479 aa32.19■■■□□ 2.74
RPSAP43-201ENST00000402237 WDR62O43379 1518 aa32.13■■■□□ 2.73
RPSAP43-201ENST00000402237 RSF1Q96T23 1441 aaPredicted RBP32.08■■■□□ 2.73
RPSAP43-201ENST00000402237 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
RPSAP43-201ENST00000402237 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
RPSAP43-201ENST00000402237 CFTRP13569 1480 aa31.99■■■□□ 2.71
RPSAP43-201ENST00000402237 TOP2AP11388 1531 aaKnown RBP31.96■■■□□ 2.71
RPSAP43-201ENST00000402237 URB2Q14146 1524 aaKnown RBP31.77■■■□□ 2.68
RPSAP43-201ENST00000402237 PRDM2Q13029 1718 aa31.68■■■□□ 2.66
RPSAP43-201ENST00000402237 TRIM41Q8WV44 630 aa31.67■■■□□ 2.66
RPSAP43-201ENST00000402237 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
RPSAP43-201ENST00000402237 OSCARQ8IYS5 282 aa31.56■■■□□ 2.64
RPSAP43-201ENST00000402237 IFT140Q96RY7 1462 aa31.41■■■□□ 2.62
RPSAP43-201ENST00000402237 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
RPSAP43-201ENST00000402237 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.62
RPSAP43-201ENST00000402237 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
RPSAP43-201ENST00000402237 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.6
RPSAP43-201ENST00000402237 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.58
RPSAP43-201ENST00000402237 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
RPSAP43-201ENST00000402237 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
RPSAP43-201ENST00000402237 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
RPSAP43-201ENST00000402237 TARBP1Q13395 1621 aaKnown RBP31.15■■■□□ 2.58
RPSAP43-201ENST00000402237 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.57
RPSAP43-201ENST00000402237 POLA1P09884 1462 aaPredicted RBP31.07■■■□□ 2.56
RPSAP43-201ENST00000402237 ARHGEF11O15085 1522 aa31.06■■■□□ 2.56
RPSAP43-201ENST00000402237 CHD1O14646 1710 aa31.01■■■□□ 2.55
RPSAP43-201ENST00000402237 RAD54L2Q9Y4B4 1467 aa30.95■■■□□ 2.55
RPSAP43-201ENST00000402237 SOGA1O94964 1423 aa30.91■■■□□ 2.54
RPSAP43-201ENST00000402237 FBLN2P98095 1184 aa30.87■■■□□ 2.53
RPSAP43-201ENST00000402237 TDRD9Q8NDG6 1382 aaKnown RBP30.87■■■□□ 2.53
RPSAP43-201ENST00000402237 FGD5Q6ZNL6 1462 aa30.84■■■□□ 2.53
RPSAP43-201ENST00000402237 CYB5RLQ6IPT4 315 aa30.83■■■□□ 2.53
RPSAP43-201ENST00000402237 CUX1P39880 1505 aa30.82■■■□□ 2.52
RPSAP43-201ENST00000402237 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
RPSAP43-201ENST00000402237 ARAP1Q96P48 1450 aa30.76■■■□□ 2.51
RPSAP43-201ENST00000402237 SNAPC4Q5SXM2 1469 aa30.75■■■□□ 2.51
RPSAP43-201ENST00000402237 MAGI1Q96QZ7 1491 aaPredicted RBP30.67■■■□□ 2.5
RPSAP43-201ENST00000402237 GRIN2BQ13224 1484 aa30.65■■■□□ 2.5
RPSAP43-201ENST00000402237 CLASP1Q7Z460 1538 aa30.65■■■□□ 2.5
RPSAP43-201ENST00000402237 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
RPSAP43-201ENST00000402237 SYNJ1O43426 1573 aa30.59■■■□□ 2.49
RPSAP43-201ENST00000402237 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
RPSAP43-201ENST00000402237 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
RPSAP43-201ENST00000402237 GAPVD1Q14C86 1478 aa30.53■■■□□ 2.48
RPSAP43-201ENST00000402237 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
RPSAP43-201ENST00000402237 ABCA10Q8WWZ4 1543 aa30.51■■■□□ 2.47
RPSAP43-201ENST00000402237 TRHP20396 242 aaPredicted RBP30.49■■■□□ 2.47
RPSAP43-201ENST00000402237 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
RPSAP43-201ENST00000402237 WRNQ14191 1432 aaPredicted RBP eCLIP30.33■■■□□ 2.45
RPSAP43-201ENST00000402237 BIVM-ERCC5R4GMW8 1640 aa30.3■■■□□ 2.44
RPSAP43-201ENST00000402237 TOP2BQ02880 1626 aa30.29■■■□□ 2.44
RPSAP43-201ENST00000402237 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
RPSAP43-201ENST00000402237 ADAMTS12P58397 1594 aa30.23■■■□□ 2.43
RPSAP43-201ENST00000402237 NUP160Q12769 1436 aa30.18■■■□□ 2.42
RPSAP43-201ENST00000402237 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
RPSAP43-201ENST00000402237 ERCC6L2Q5T890 1561 aa30.17■■■□□ 2.42
RPSAP43-201ENST00000402237 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
RPSAP43-201ENST00000402237 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
RPSAP43-201ENST00000402237 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
RPSAP43-201ENST00000402237 PRG4Q92954 1404 aaPredicted RBP29.88■■■□□ 2.37
RPSAP43-201ENST00000402237 JPH4Q96JJ6 628 aa29.87■■■□□ 2.37
RPSAP43-201ENST00000402237 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
RPSAP43-201ENST00000402237 KIF13AQ9H1H9 1805 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms