RNA–Protein interactions for RNA: ENST00000401980.3

SOD2-204, Transcript of superoxide dismutase 2, humanhuman

TSL 4

Gene SOD2, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-204ENST00000401980 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
SOD2-204ENST00000401980 ABCC9O60706 1549 aa28.42■■■□□ 2.14
SOD2-204ENST00000401980 CCDC180Q9P1Z9 1646 aa28.05■■■□□ 2.08
SOD2-204ENST00000401980 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
SOD2-204ENST00000401980 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
SOD2-204ENST00000401980 NACADO15069 1562 aa26.61■■□□□ 1.85
SOD2-204ENST00000401980 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
SOD2-204ENST00000401980 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
SOD2-204ENST00000401980 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
SOD2-204ENST00000401980 BICRAQ9NZM4 1560 aa26.14■■□□□ 1.78
SOD2-204ENST00000401980 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
SOD2-204ENST00000401980 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
SOD2-204ENST00000401980 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
SOD2-204ENST00000401980 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
SOD2-204ENST00000401980 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
SOD2-204ENST00000401980 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
SOD2-204ENST00000401980 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
SOD2-204ENST00000401980 EIF4G1Q04637 1599 aaKnown RBP25.5■■□□□ 1.67
SOD2-204ENST00000401980 DNAJC5Q9H3Z4 198 aa25.1■■□□□ 1.61
SOD2-204ENST00000401980 CUX2O14529 1486 aa24.64■■□□□ 1.53
SOD2-204ENST00000401980 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
SOD2-204ENST00000401980 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
SOD2-204ENST00000401980 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
SOD2-204ENST00000401980 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
SOD2-204ENST00000401980 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
SOD2-204ENST00000401980 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
SOD2-204ENST00000401980 NESP48681 1621 aa24.32■■□□□ 1.48
SOD2-204ENST00000401980 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
SOD2-204ENST00000401980 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
SOD2-204ENST00000401980 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
SOD2-204ENST00000401980 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
SOD2-204ENST00000401980 LAMC3Q9Y6N6 1575 aa24.07■■□□□ 1.44
SOD2-204ENST00000401980 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
SOD2-204ENST00000401980 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
SOD2-204ENST00000401980 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
SOD2-204ENST00000401980 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
SOD2-204ENST00000401980 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
SOD2-204ENST00000401980 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
SOD2-204ENST00000401980 WDR62O43379 1518 aa23.71■■□□□ 1.39
SOD2-204ENST00000401980 WIZO95785 1651 aa23.65■■□□□ 1.38
SOD2-204ENST00000401980 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
SOD2-204ENST00000401980 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
SOD2-204ENST00000401980 OSCARQ8IYS5 282 aa23.48■■□□□ 1.35
SOD2-204ENST00000401980 CFTRP13569 1480 aa23.45■■□□□ 1.34
SOD2-204ENST00000401980 URB2Q14146 1524 aaKnown RBP23.37■■□□□ 1.33
SOD2-204ENST00000401980 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
SOD2-204ENST00000401980 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
SOD2-204ENST00000401980 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
SOD2-204ENST00000401980 RIMBP3CA6NJZ7 1639 aa23.21■■□□□ 1.31
SOD2-204ENST00000401980 RIMBP3BA6NNM3 1639 aa23.21■■□□□ 1.31
SOD2-204ENST00000401980 RIMBP3Q9UFD9 1639 aa23.21■■□□□ 1.31
SOD2-204ENST00000401980 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
SOD2-204ENST00000401980 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
SOD2-204ENST00000401980 ARHGEF11O15085 1522 aa23.08■■□□□ 1.28
SOD2-204ENST00000401980 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
SOD2-204ENST00000401980 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
SOD2-204ENST00000401980 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
SOD2-204ENST00000401980 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
SOD2-204ENST00000401980 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
SOD2-204ENST00000401980 CHD1O14646 1710 aa22.93■■□□□ 1.26
SOD2-204ENST00000401980 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
SOD2-204ENST00000401980 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.251e-6■■■■■ 33.2
SOD2-204ENST00000401980 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
SOD2-204ENST00000401980 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
SOD2-204ENST00000401980 FBLN2P98095 1184 aa22.81■■□□□ 1.24
SOD2-204ENST00000401980 TRHP20396 242 aaPredicted RBP22.8■■□□□ 1.24
SOD2-204ENST00000401980 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
SOD2-204ENST00000401980 SUPT5HO00267 1087 aaKnown RBP22.76■■□□□ 1.23
SOD2-204ENST00000401980 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
SOD2-204ENST00000401980 SOGA1O94964 1423 aa22.68■■□□□ 1.22
SOD2-204ENST00000401980 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
SOD2-204ENST00000401980 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
SOD2-204ENST00000401980 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
SOD2-204ENST00000401980 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
SOD2-204ENST00000401980 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
SOD2-204ENST00000401980 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.2
SOD2-204ENST00000401980 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
SOD2-204ENST00000401980 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
SOD2-204ENST00000401980 CUX1P39880 1505 aa22.52■■□□□ 1.19
SOD2-204ENST00000401980 GRIN2BQ13224 1484 aa22.51■■□□□ 1.19
SOD2-204ENST00000401980 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
SOD2-204ENST00000401980 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
SOD2-204ENST00000401980 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
SOD2-204ENST00000401980 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
SOD2-204ENST00000401980 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
SOD2-204ENST00000401980 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
SOD2-204ENST00000401980 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
SOD2-204ENST00000401980 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
SOD2-204ENST00000401980 CEP170Q5SW79 1584 aa22.18■■□□□ 1.14
SOD2-204ENST00000401980 NUP160Q12769 1436 aa22.17■■□□□ 1.14
SOD2-204ENST00000401980 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
SOD2-204ENST00000401980 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
SOD2-204ENST00000401980 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
SOD2-204ENST00000401980 KIF13AQ9H1H9 1805 aa22.09■■□□□ 1.13
SOD2-204ENST00000401980 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
SOD2-204ENST00000401980 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
SOD2-204ENST00000401980 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
SOD2-204ENST00000401980 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
SOD2-204ENST00000401980 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
SOD2-204ENST00000401980 JPH4Q96JJ6 628 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms