RNA–Protein interactions for RNA: ENST00000401880.1

R3HDM2P2-201, Transcript of R3H domain containing 2 pseudogene 2, humanhuman

BASIC

Gene R3HDM2P2, Length 2,116 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2P2-201ENST00000401880 NISCHQ9Y2I1 1504 aa34.29■■■■□ 3.08
R3HDM2P2-201ENST00000401880 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
R3HDM2P2-201ENST00000401880 ABCC9O60706 1549 aa29.01■■■□□ 2.23
R3HDM2P2-201ENST00000401880 ZCCHC6Q5VYS8 1495 aaKnown RBP28.69■■■□□ 2.18
R3HDM2P2-201ENST00000401880 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
R3HDM2P2-201ENST00000401880 DCAF1Q9Y4B6 1507 aa28.3■■■□□ 2.12
R3HDM2P2-201ENST00000401880 NACADO15069 1562 aa28.17■■■□□ 2.1
R3HDM2P2-201ENST00000401880 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
R3HDM2P2-201ENST00000401880 RB1CC1Q8TDY2 1594 aa28.06■■■□□ 2.08
R3HDM2P2-201ENST00000401880 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
R3HDM2P2-201ENST00000401880 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
R3HDM2P2-201ENST00000401880 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
R3HDM2P2-201ENST00000401880 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
R3HDM2P2-201ENST00000401880 BICRAQ9NZM4 1560 aa27.23■■□□□ 1.95
R3HDM2P2-201ENST00000401880 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
R3HDM2P2-201ENST00000401880 BAZ1AQ9NRL2 1556 aaPredicted RBP26.52■■□□□ 1.84
R3HDM2P2-201ENST00000401880 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
R3HDM2P2-201ENST00000401880 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
R3HDM2P2-201ENST00000401880 EIF4G1Q04637 1599 aaKnown RBP26.46■■□□□ 1.83
R3HDM2P2-201ENST00000401880 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
R3HDM2P2-201ENST00000401880 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
R3HDM2P2-201ENST00000401880 WIZO95785 1651 aa26.26■■□□□ 1.79
R3HDM2P2-201ENST00000401880 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
R3HDM2P2-201ENST00000401880 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
R3HDM2P2-201ENST00000401880 PEG3Q9GZU2 1588 aa26.13■■□□□ 1.77
R3HDM2P2-201ENST00000401880 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
R3HDM2P2-201ENST00000401880 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
R3HDM2P2-201ENST00000401880 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
R3HDM2P2-201ENST00000401880 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
R3HDM2P2-201ENST00000401880 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
R3HDM2P2-201ENST00000401880 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
R3HDM2P2-201ENST00000401880 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
R3HDM2P2-201ENST00000401880 CADPSQ9ULU8 1353 aa25.33■■□□□ 1.65
R3HDM2P2-201ENST00000401880 CFTRP13569 1480 aa25.3■■□□□ 1.64
R3HDM2P2-201ENST00000401880 NESP48681 1621 aa25.3■■□□□ 1.64
R3HDM2P2-201ENST00000401880 HRCP23327 699 aa25.29■■□□□ 1.64
R3HDM2P2-201ENST00000401880 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
R3HDM2P2-201ENST00000401880 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
R3HDM2P2-201ENST00000401880 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
R3HDM2P2-201ENST00000401880 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
R3HDM2P2-201ENST00000401880 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
R3HDM2P2-201ENST00000401880 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
R3HDM2P2-201ENST00000401880 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
R3HDM2P2-201ENST00000401880 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
R3HDM2P2-201ENST00000401880 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
R3HDM2P2-201ENST00000401880 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
R3HDM2P2-201ENST00000401880 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
R3HDM2P2-201ENST00000401880 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
R3HDM2P2-201ENST00000401880 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
R3HDM2P2-201ENST00000401880 CUX1P39880 1505 aa24.8■■□□□ 1.56
R3HDM2P2-201ENST00000401880 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
R3HDM2P2-201ENST00000401880 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
R3HDM2P2-201ENST00000401880 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
R3HDM2P2-201ENST00000401880 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
R3HDM2P2-201ENST00000401880 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
R3HDM2P2-201ENST00000401880 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
R3HDM2P2-201ENST00000401880 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
R3HDM2P2-201ENST00000401880 WDR62O43379 1518 aa24.63■■□□□ 1.53
R3HDM2P2-201ENST00000401880 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
R3HDM2P2-201ENST00000401880 POLA1P09884 1462 aaPredicted RBP24.57■■□□□ 1.52
R3HDM2P2-201ENST00000401880 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
R3HDM2P2-201ENST00000401880 SOGA1O94964 1423 aa24.49■■□□□ 1.51
R3HDM2P2-201ENST00000401880 CUX2O14529 1486 aa24.46■■□□□ 1.51
R3HDM2P2-201ENST00000401880 MYT1Q01538 1121 aa24.46■■□□□ 1.51
R3HDM2P2-201ENST00000401880 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
R3HDM2P2-201ENST00000401880 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
R3HDM2P2-201ENST00000401880 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
R3HDM2P2-201ENST00000401880 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
R3HDM2P2-201ENST00000401880 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
R3HDM2P2-201ENST00000401880 TDRD9Q8NDG6 1382 aaKnown RBP24.33■■□□□ 1.49
R3HDM2P2-201ENST00000401880 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
R3HDM2P2-201ENST00000401880 PPARGC1BQ86YN6 1023 aaKnown RBP24.32■■□□□ 1.48
R3HDM2P2-201ENST00000401880 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
R3HDM2P2-201ENST00000401880 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
R3HDM2P2-201ENST00000401880 ZNF608Q9ULD9 1512 aaPredicted RBP24.29■■□□□ 1.48
R3HDM2P2-201ENST00000401880 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
R3HDM2P2-201ENST00000401880 EEA1Q15075 1411 aa24.22■■□□□ 1.47
R3HDM2P2-201ENST00000401880 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
R3HDM2P2-201ENST00000401880 CSRNP3Q8WYN3 585 aa24.2■■□□□ 1.47
R3HDM2P2-201ENST00000401880 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
R3HDM2P2-201ENST00000401880 EIF4G3O43432 1585 aaKnown RBP24.17■■□□□ 1.46
R3HDM2P2-201ENST00000401880 IGF1RP08069 1367 aa24.15■■□□□ 1.46
R3HDM2P2-201ENST00000401880 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.45
R3HDM2P2-201ENST00000401880 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
R3HDM2P2-201ENST00000401880 GRIN2BQ13224 1484 aa24.09■■□□□ 1.45
R3HDM2P2-201ENST00000401880 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
R3HDM2P2-201ENST00000401880 LOC105371045A0A1W2PR82 267 aa24.04■■□□□ 1.44
R3HDM2P2-201ENST00000401880 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
R3HDM2P2-201ENST00000401880 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
R3HDM2P2-201ENST00000401880 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
R3HDM2P2-201ENST00000401880 CUL7Q14999 1698 aa23.97■■□□□ 1.43
R3HDM2P2-201ENST00000401880 RAPGEF2Q9Y4G8 1499 aa23.96■■□□□ 1.43
R3HDM2P2-201ENST00000401880 KIF21BO75037 1637 aa23.94■■□□□ 1.42
R3HDM2P2-201ENST00000401880 ADAMTS12P58397 1594 aa23.93■■□□□ 1.42
R3HDM2P2-201ENST00000401880 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
R3HDM2P2-201ENST00000401880 FHAD1B1AJZ9 1412 aa23.92■■□□□ 1.42
R3HDM2P2-201ENST00000401880 SCAF1Q9H7N4 1312 aaKnown RBP23.92■■□□□ 1.42
R3HDM2P2-201ENST00000401880 ZEB1P37275 1124 aaPredicted RBP23.91■■□□□ 1.42
R3HDM2P2-201ENST00000401880 FBLN2P98095 1184 aa23.91■■□□□ 1.42
R3HDM2P2-201ENST00000401880 GOLGA3Q08378 1498 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 230.1 ms