RNA–Protein interactions for RNA: ENST00000401561.2

ACTG1P18-201, Transcript of actin gamma 1 pseudogene 18, humanhuman

BASIC

Gene ACTG1P18, Length 1,143 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1P18-201ENST00000401561 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
ACTG1P18-201ENST00000401561 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
ACTG1P18-201ENST00000401561 ABCC9O60706 1549 aa24.15■■□□□ 1.46
ACTG1P18-201ENST00000401561 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
ACTG1P18-201ENST00000401561 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
ACTG1P18-201ENST00000401561 NACADO15069 1562 aa23.42■■□□□ 1.34
ACTG1P18-201ENST00000401561 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
ACTG1P18-201ENST00000401561 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
ACTG1P18-201ENST00000401561 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
ACTG1P18-201ENST00000401561 UNC13AQ9UPW8 1703 aa22.98■■□□□ 1.27
ACTG1P18-201ENST00000401561 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
ACTG1P18-201ENST00000401561 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
ACTG1P18-201ENST00000401561 SHROOM4Q9ULL8 1493 aa22.56■■□□□ 1.2
ACTG1P18-201ENST00000401561 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
ACTG1P18-201ENST00000401561 EIF4G1Q04637 1599 aaKnown RBP22.07■■□□□ 1.12
ACTG1P18-201ENST00000401561 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
ACTG1P18-201ENST00000401561 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
ACTG1P18-201ENST00000401561 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
ACTG1P18-201ENST00000401561 CC2D2AQ9P2K1 1620 aa21.89■■□□□ 1.09
ACTG1P18-201ENST00000401561 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
ACTG1P18-201ENST00000401561 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
ACTG1P18-201ENST00000401561 PEG3Q9GZU2 1588 aa21.73■■□□□ 1.07
ACTG1P18-201ENST00000401561 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
ACTG1P18-201ENST00000401561 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
ACTG1P18-201ENST00000401561 WIZO95785 1651 aa21.67■■□□□ 1.06
ACTG1P18-201ENST00000401561 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
ACTG1P18-201ENST00000401561 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
ACTG1P18-201ENST00000401561 HMGXB3Q12766 1538 aa21.59■■□□□ 1.05
ACTG1P18-201ENST00000401561 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.03
ACTG1P18-201ENST00000401561 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
ACTG1P18-201ENST00000401561 SUPT5HO00267 1087 aaKnown RBP21.3■■□□□ 1
ACTG1P18-201ENST00000401561 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
ACTG1P18-201ENST00000401561 NESP48681 1621 aa21.04■□□□□ 0.96
ACTG1P18-201ENST00000401561 LAMC3Q9Y6N6 1575 aa21■□□□□ 0.95
ACTG1P18-201ENST00000401561 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
ACTG1P18-201ENST00000401561 CFTRP13569 1480 aa20.95■□□□□ 0.94
ACTG1P18-201ENST00000401561 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
ACTG1P18-201ENST00000401561 KIF21AQ7Z4S6 1674 aa20.85■□□□□ 0.93
ACTG1P18-201ENST00000401561 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
ACTG1P18-201ENST00000401561 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
ACTG1P18-201ENST00000401561 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
ACTG1P18-201ENST00000401561 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
ACTG1P18-201ENST00000401561 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
ACTG1P18-201ENST00000401561 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
ACTG1P18-201ENST00000401561 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
ACTG1P18-201ENST00000401561 WDR62O43379 1518 aa20.58■□□□□ 0.88
ACTG1P18-201ENST00000401561 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
ACTG1P18-201ENST00000401561 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
ACTG1P18-201ENST00000401561 CUX1P39880 1505 aa20.51■□□□□ 0.87
ACTG1P18-201ENST00000401561 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
ACTG1P18-201ENST00000401561 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
ACTG1P18-201ENST00000401561 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
ACTG1P18-201ENST00000401561 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
ACTG1P18-201ENST00000401561 CUX2O14529 1486 aa20.42■□□□□ 0.86
ACTG1P18-201ENST00000401561 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
ACTG1P18-201ENST00000401561 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
ACTG1P18-201ENST00000401561 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
ACTG1P18-201ENST00000401561 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
ACTG1P18-201ENST00000401561 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
ACTG1P18-201ENST00000401561 RAD54L2Q9Y4B4 1467 aa20.25■□□□□ 0.83
ACTG1P18-201ENST00000401561 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
ACTG1P18-201ENST00000401561 SOGA1O94964 1423 aa20.19■□□□□ 0.82
ACTG1P18-201ENST00000401561 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
ACTG1P18-201ENST00000401561 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
ACTG1P18-201ENST00000401561 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
ACTG1P18-201ENST00000401561 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
ACTG1P18-201ENST00000401561 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
ACTG1P18-201ENST00000401561 AQRO60306 1485 aaKnown RBP eCLIP20.05■□□□□ 0.8
ACTG1P18-201ENST00000401561 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
ACTG1P18-201ENST00000401561 TDRD9Q8NDG6 1382 aaKnown RBP20.05■□□□□ 0.8
ACTG1P18-201ENST00000401561 PBRM1Q86U86 1689 aa20.04■□□□□ 0.8
ACTG1P18-201ENST00000401561 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
ACTG1P18-201ENST00000401561 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
ACTG1P18-201ENST00000401561 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
ACTG1P18-201ENST00000401561 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
ACTG1P18-201ENST00000401561 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
ACTG1P18-201ENST00000401561 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
ACTG1P18-201ENST00000401561 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
ACTG1P18-201ENST00000401561 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
ACTG1P18-201ENST00000401561 CHD1O14646 1710 aa19.84■□□□□ 0.77
ACTG1P18-201ENST00000401561 CUL7Q14999 1698 aa19.83■□□□□ 0.76
ACTG1P18-201ENST00000401561 IGF1RP08069 1367 aa19.82■□□□□ 0.76
ACTG1P18-201ENST00000401561 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
ACTG1P18-201ENST00000401561 EEA1Q15075 1411 aa19.77■□□□□ 0.76
ACTG1P18-201ENST00000401561 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
ACTG1P18-201ENST00000401561 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
ACTG1P18-201ENST00000401561 PRXQ9BXM0 1461 aa19.71■□□□□ 0.75
ACTG1P18-201ENST00000401561 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
ACTG1P18-201ENST00000401561 CARMIL1Q5VZK9 1371 aa19.69■□□□□ 0.74
ACTG1P18-201ENST00000401561 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
ACTG1P18-201ENST00000401561 KIF21BO75037 1637 aa19.65■□□□□ 0.74
ACTG1P18-201ENST00000401561 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
ACTG1P18-201ENST00000401561 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
ACTG1P18-201ENST00000401561 NUP160Q12769 1436 aa19.63■□□□□ 0.73
ACTG1P18-201ENST00000401561 CLASP1Q7Z460 1538 aa19.62■□□□□ 0.73
ACTG1P18-201ENST00000401561 FBLN2P98095 1184 aa19.62■□□□□ 0.73
ACTG1P18-201ENST00000401561 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
ACTG1P18-201ENST00000401561 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
ACTG1P18-201ENST00000401561 GOLGA3Q08378 1498 aa19.51■□□□□ 0.71
ACTG1P18-201ENST00000401561 SHROOM2Q13796 1616 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms