RNA–Protein interactions for RNA: ENST00000401004.2

HIST2H3DP1-201, Transcript of histone cluster 2 H3 family member d pseudogene 1, humanhuman

BASIC

Gene HIST2H3DP1, Length 416 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3DP1-201ENST00000401004 NISCHQ9Y2I1 1504 aa42.91■■■■■ 4.46
HIST2H3DP1-201ENST00000401004 CCDC180Q9P1Z9 1646 aa38.32■■■■□ 3.73
HIST2H3DP1-201ENST00000401004 ABCC9O60706 1549 aa37.82■■■■□ 3.65
HIST2H3DP1-201ENST00000401004 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
HIST2H3DP1-201ENST00000401004 NACADO15069 1562 aa36.12■■■■□ 3.37
HIST2H3DP1-201ENST00000401004 DCAF8L2P0C7V8 631 aa36.1■■■■□ 3.37
HIST2H3DP1-201ENST00000401004 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
HIST2H3DP1-201ENST00000401004 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
HIST2H3DP1-201ENST00000401004 DCAF1Q9Y4B6 1507 aa35.49■■■■□ 3.27
HIST2H3DP1-201ENST00000401004 UNC13AQ9UPW8 1703 aa35.35■■■■□ 3.25
HIST2H3DP1-201ENST00000401004 PABPN1Q86U42 306 aaKnown RBP eCLIP35.29■■■■□ 3.24
HIST2H3DP1-201ENST00000401004 BICRAQ9NZM4 1560 aa35.08■■■■□ 3.21
HIST2H3DP1-201ENST00000401004 SCRIBQ14160 1630 aa34.95■■■■□ 3.18
HIST2H3DP1-201ENST00000401004 DNAJC5BQ9UF47 199 aa34.94■■■■□ 3.18
HIST2H3DP1-201ENST00000401004 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
HIST2H3DP1-201ENST00000401004 EIF4G1Q04637 1599 aaKnown RBP34.24■■■■□ 3.07
HIST2H3DP1-201ENST00000401004 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
HIST2H3DP1-201ENST00000401004 CECR2Q9BXF3 1484 aa34.04■■■■□ 3.04
HIST2H3DP1-201ENST00000401004 SMARCA4P51532 1647 aa33.38■■■□□ 2.93
HIST2H3DP1-201ENST00000401004 BAZ1AQ9NRL2 1556 aaPredicted RBP33.33■■■□□ 2.93
HIST2H3DP1-201ENST00000401004 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
HIST2H3DP1-201ENST00000401004 ATAD2BQ9ULI0 1458 aa33.27■■■□□ 2.92
HIST2H3DP1-201ENST00000401004 SMARCA2P51531 1590 aa33.26■■■□□ 2.92
HIST2H3DP1-201ENST00000401004 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
HIST2H3DP1-201ENST00000401004 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
HIST2H3DP1-201ENST00000401004 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
HIST2H3DP1-201ENST00000401004 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
HIST2H3DP1-201ENST00000401004 ERCC6Q03468 1493 aa32.7■■■□□ 2.83
HIST2H3DP1-201ENST00000401004 WIZO95785 1651 aa32.69■■■□□ 2.82
HIST2H3DP1-201ENST00000401004 NESP48681 1621 aa32.59■■■□□ 2.81
HIST2H3DP1-201ENST00000401004 RSF1Q96T23 1441 aaPredicted RBP32.56■■■□□ 2.8
HIST2H3DP1-201ENST00000401004 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
HIST2H3DP1-201ENST00000401004 CUX2O14529 1486 aa32.43■■■□□ 2.78
HIST2H3DP1-201ENST00000401004 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
HIST2H3DP1-201ENST00000401004 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
HIST2H3DP1-201ENST00000401004 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
HIST2H3DP1-201ENST00000401004 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
HIST2H3DP1-201ENST00000401004 THOC2Q8NI27 1593 aaKnown RBP32.18■■■□□ 2.74
HIST2H3DP1-201ENST00000401004 CFTRP13569 1480 aa32.06■■■□□ 2.72
HIST2H3DP1-201ENST00000401004 MRC2Q9UBG0 1479 aa32■■■□□ 2.71
HIST2H3DP1-201ENST00000401004 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
HIST2H3DP1-201ENST00000401004 FANCD2Q9BXW9 1451 aa31.98■■■□□ 2.71
HIST2H3DP1-201ENST00000401004 CCDC88BA6NC98 1476 aa31.95■■■□□ 2.7
HIST2H3DP1-201ENST00000401004 WDR62O43379 1518 aa31.89■■■□□ 2.7
HIST2H3DP1-201ENST00000401004 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
HIST2H3DP1-201ENST00000401004 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
HIST2H3DP1-201ENST00000401004 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
HIST2H3DP1-201ENST00000401004 SUPT5HO00267 1087 aaKnown RBP31.56■■■□□ 2.64
HIST2H3DP1-201ENST00000401004 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
HIST2H3DP1-201ENST00000401004 TOPBP1Q92547 1522 aa31.41■■■□□ 2.62
HIST2H3DP1-201ENST00000401004 DNMBPQ6XZF7 1577 aa31.36■■■□□ 2.61
HIST2H3DP1-201ENST00000401004 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
HIST2H3DP1-201ENST00000401004 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
HIST2H3DP1-201ENST00000401004 POLA1P09884 1462 aaPredicted RBP31.12■■■□□ 2.57
HIST2H3DP1-201ENST00000401004 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
HIST2H3DP1-201ENST00000401004 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
HIST2H3DP1-201ENST00000401004 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
HIST2H3DP1-201ENST00000401004 CUX1P39880 1505 aa31.03■■■□□ 2.56
HIST2H3DP1-201ENST00000401004 SOGA1O94964 1423 aa31.02■■■□□ 2.56
HIST2H3DP1-201ENST00000401004 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.55
HIST2H3DP1-201ENST00000401004 RAD54L2Q9Y4B4 1467 aa30.99■■■□□ 2.55
HIST2H3DP1-201ENST00000401004 AQRO60306 1485 aaKnown RBP eCLIP30.97■■■□□ 2.55
HIST2H3DP1-201ENST00000401004 TDRD9Q8NDG6 1382 aaKnown RBP30.87■■■□□ 2.53
HIST2H3DP1-201ENST00000401004 WDR97A6NE52 1622 aa30.87■■■□□ 2.53
HIST2H3DP1-201ENST00000401004 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.51
HIST2H3DP1-201ENST00000401004 FBLN2P98095 1184 aa30.75■■■□□ 2.51
HIST2H3DP1-201ENST00000401004 CHD1O14646 1710 aa30.72■■■□□ 2.51
HIST2H3DP1-201ENST00000401004 TOP2BQ02880 1626 aa30.7■■■□□ 2.51
HIST2H3DP1-201ENST00000401004 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 BIVM-ERCC5R4GMW8 1640 aa30.68■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 TRIM41Q8WV44 630 aa30.67■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 GAPVD1Q14C86 1478 aa30.65■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 MAGI1Q96QZ7 1491 aaPredicted RBP30.65■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 SYNJ1O43426 1573 aa30.65■■■□□ 2.5
HIST2H3DP1-201ENST00000401004 CHMP7Q8WUX9 453 aaPredicted RBP30.6■■■□□ 2.49
HIST2H3DP1-201ENST00000401004 PBRM1Q86U86 1689 aa30.59■■■□□ 2.49
HIST2H3DP1-201ENST00000401004 ABCA5Q8WWZ7 1642 aa30.58■■■□□ 2.49
HIST2H3DP1-201ENST00000401004 SYNJ2O15056 1496 aa30.54■■■□□ 2.48
HIST2H3DP1-201ENST00000401004 RIMBP3CA6NJZ7 1639 aa30.53■■■□□ 2.48
HIST2H3DP1-201ENST00000401004 RIMBP3BA6NNM3 1639 aa30.53■■■□□ 2.48
HIST2H3DP1-201ENST00000401004 RIMBP3Q9UFD9 1639 aa30.53■■■□□ 2.48
HIST2H3DP1-201ENST00000401004 ARHGEF11O15085 1522 aa30.5■■■□□ 2.47
HIST2H3DP1-201ENST00000401004 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
HIST2H3DP1-201ENST00000401004 ADAMTS12P58397 1594 aa30.33■■■□□ 2.45
HIST2H3DP1-201ENST00000401004 ERICH3Q5RHP9 1530 aa30.33■■■□□ 2.45
HIST2H3DP1-201ENST00000401004 GRIN2AQ12879 1464 aa30.29■■■□□ 2.44
HIST2H3DP1-201ENST00000401004 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
HIST2H3DP1-201ENST00000401004 CYB5RLQ6IPT4 315 aa30.27■■■□□ 2.44
HIST2H3DP1-201ENST00000401004 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
HIST2H3DP1-201ENST00000401004 KIF27Q86VH2 1401 aa30.16■■■□□ 2.42
HIST2H3DP1-201ENST00000401004 NUP160Q12769 1436 aa30.14■■■□□ 2.42
HIST2H3DP1-201ENST00000401004 CEP170Q5SW79 1584 aa30.13■■■□□ 2.41
HIST2H3DP1-201ENST00000401004 IGF1RP08069 1367 aa30.03■■■□□ 2.4
HIST2H3DP1-201ENST00000401004 CUL7Q14999 1698 aa30.01■■■□□ 2.39
HIST2H3DP1-201ENST00000401004 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
HIST2H3DP1-201ENST00000401004 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
HIST2H3DP1-201ENST00000401004 RUSC2Q8N2Y8 1516 aa29.88■■■□□ 2.37
HIST2H3DP1-201ENST00000401004 JPH4Q96JJ6 628 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms