RNA–Protein interactions for RNA: ENST00000400918.7

FAAP20-203, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-203ENST00000400918 NISCHQ9Y2I1 1504 aa55.24■■■■■ 6.43
FAAP20-203ENST00000400918 CCDC180Q9P1Z9 1646 aa49.18■■■■■ 5.46
FAAP20-203ENST00000400918 ABCC9O60706 1549 aa48.05■■■■■ 5.28
FAAP20-203ENST00000400918 RB1CC1Q8TDY2 1594 aa46.19■■■■■ 4.99
FAAP20-203ENST00000400918 NACADO15069 1562 aa46.15■■■■■ 4.98
FAAP20-203ENST00000400918 ZCCHC6Q5VYS8 1495 aaKnown RBP46.05■■■■■ 4.96
FAAP20-203ENST00000400918 MYO15BQ96JP2 1530 aa45.89■■■■■ 4.94
FAAP20-203ENST00000400918 DCAF8L2P0C7V8 631 aa45.85■■■■■ 4.93
FAAP20-203ENST00000400918 DCAF1Q9Y4B6 1507 aa45.71■■■■■ 4.91
FAAP20-203ENST00000400918 UNC13AQ9UPW8 1703 aa45.42■■■■■ 4.86
FAAP20-203ENST00000400918 BICRAQ9NZM4 1560 aa45■■■■■ 4.79
FAAP20-203ENST00000400918 SCRIBQ14160 1630 aa44.83■■■■■ 4.77
FAAP20-203ENST00000400918 PABPN1Q86U42 306 aaKnown RBP eCLIP44.83■■■■■ 4.77
FAAP20-203ENST00000400918 SHROOM4Q9ULL8 1493 aa44.32■■■■■ 4.69
FAAP20-203ENST00000400918 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
FAAP20-203ENST00000400918 EIF4G1Q04637 1599 aaKnown RBP43.7■■■■■ 4.59
FAAP20-203ENST00000400918 CC2D2AQ9P2K1 1620 aa43.54■■■■■ 4.56
FAAP20-203ENST00000400918 CECR2Q9BXF3 1484 aa43.14■■■■■ 4.5
FAAP20-203ENST00000400918 SMARCA4P51532 1647 aa42.91■■■■■ 4.46
FAAP20-203ENST00000400918 BAZ1AQ9NRL2 1556 aaPredicted RBP42.77■■■■■ 4.44
FAAP20-203ENST00000400918 ATAD2BQ9ULI0 1458 aa42.63■■■■■ 4.42
FAAP20-203ENST00000400918 MROH2BQ7Z745 1585 aa42.62■■■■■ 4.41
FAAP20-203ENST00000400918 NCAPD3P42695 1498 aa42.59■■■■■ 4.41
FAAP20-203ENST00000400918 SMARCA2P51531 1590 aa42.52■■■■■ 4.4
FAAP20-203ENST00000400918 PEG3Q9GZU2 1588 aa42.52■■■■■ 4.4
FAAP20-203ENST00000400918 HMGXB3Q12766 1538 aa42.41■■■■■ 4.38
FAAP20-203ENST00000400918 BAZ1BQ9UIG0 1483 aaKnown RBP42.21■■■■■ 4.35
FAAP20-203ENST00000400918 WIZO95785 1651 aa42.19■■■■■ 4.34
FAAP20-203ENST00000400918 RSF1Q96T23 1441 aaPredicted RBP42.06■■■■■ 4.32
FAAP20-203ENST00000400918 TOP2AP11388 1531 aaKnown RBP41.67■■■■■ 4.26
FAAP20-203ENST00000400918 NESP48681 1621 aa41.66■■■■■ 4.26
FAAP20-203ENST00000400918 LAMC3Q9Y6N6 1575 aa41.47■■■■■ 4.23
FAAP20-203ENST00000400918 ERCC6Q03468 1493 aa41.29■■■■■ 4.2
FAAP20-203ENST00000400918 CADPSQ9ULU8 1353 aa41.28■■■■■ 4.2
FAAP20-203ENST00000400918 KIF21AQ7Z4S6 1674 aa41.23■■■■■ 4.19
FAAP20-203ENST00000400918 CCDC88BA6NC98 1476 aa41.16■■■■■ 4.18
FAAP20-203ENST00000400918 CFTRP13569 1480 aa41.11■■■■■ 4.17
FAAP20-203ENST00000400918 THOC2Q8NI27 1593 aaKnown RBP41.09■■■■■ 4.17
FAAP20-203ENST00000400918 PDS5BQ9NTI5 1447 aa41.07■■■■■ 4.16
FAAP20-203ENST00000400918 CUX2O14529 1486 aa40.96■■■■■ 4.15
FAAP20-203ENST00000400918 PRDM2Q13029 1718 aa40.93■■■■■ 4.14
FAAP20-203ENST00000400918 FANCD2Q9BXW9 1451 aa40.85■■■■■ 4.13
FAAP20-203ENST00000400918 CEP164Q9UPV0 1460 aa40.78■■■■■ 4.12
FAAP20-203ENST00000400918 SUPT5HO00267 1087 aaKnown RBP40.77■■■■■ 4.12
FAAP20-203ENST00000400918 MRC2Q9UBG0 1479 aa40.75■■■■■ 4.11
FAAP20-203ENST00000400918 WDR62O43379 1518 aa40.7■■■■■ 4.11
FAAP20-203ENST00000400918 URB2Q14146 1524 aaKnown RBP40.54■■■■■ 4.08
FAAP20-203ENST00000400918 TOPBP1Q92547 1522 aa40.25■■■■■ 4.03
FAAP20-203ENST00000400918 DNMBPQ6XZF7 1577 aa40.19■■■■■ 4.02
FAAP20-203ENST00000400918 ABCC8Q09428 1581 aa40.1■■■■■ 4.01
FAAP20-203ENST00000400918 CUX1P39880 1505 aa39.99■■■■□ 3.99
FAAP20-203ENST00000400918 IFT140Q96RY7 1462 aa39.91■■■■□ 3.98
FAAP20-203ENST00000400918 TARBP1Q13395 1621 aaKnown RBP39.91■■■■□ 3.98
FAAP20-203ENST00000400918 POLA1P09884 1462 aaPredicted RBP39.9■■■■□ 3.98
FAAP20-203ENST00000400918 ZNF608Q9ULD9 1512 aaPredicted RBP39.86■■■■□ 3.97
FAAP20-203ENST00000400918 FGD5Q6ZNL6 1462 aa39.79■■■■□ 3.96
FAAP20-203ENST00000400918 RAD54L2Q9Y4B4 1467 aa39.73■■■■□ 3.95
FAAP20-203ENST00000400918 EIF4G3O43432 1585 aaKnown RBP39.72■■■■□ 3.95
FAAP20-203ENST00000400918 DNAJC5Q9H3Z4 198 aa39.71■■■■□ 3.95
FAAP20-203ENST00000400918 BIVM-ERCC5R4GMW8 1640 aa39.65■■■■□ 3.94
FAAP20-203ENST00000400918 SYNJ1O43426 1573 aa39.64■■■■□ 3.94
FAAP20-203ENST00000400918 WDR97A6NE52 1622 aa39.63■■■■□ 3.93
FAAP20-203ENST00000400918 SOGA1O94964 1423 aa39.63■■■■□ 3.93
FAAP20-203ENST00000400918 TOP2BQ02880 1626 aa39.61■■■■□ 3.93
FAAP20-203ENST00000400918 WRNQ14191 1432 aaPredicted RBP eCLIP39.58■■■■□ 3.93
FAAP20-203ENST00000400918 AQRO60306 1485 aaKnown RBP eCLIP39.56■■■■□ 3.922e-6■■□□□ 13.2
FAAP20-203ENST00000400918 TDRD9Q8NDG6 1382 aaKnown RBP39.44■■■■□ 3.9
FAAP20-203ENST00000400918 ABCA10Q8WWZ4 1543 aa39.4■■■■□ 3.9
FAAP20-203ENST00000400918 ABCA5Q8WWZ7 1642 aa39.34■■■■□ 3.89
FAAP20-203ENST00000400918 PBRM1Q86U86 1689 aa39.28■■■■□ 3.88
FAAP20-203ENST00000400918 CHD1O14646 1710 aa39.26■■■■□ 3.88
FAAP20-203ENST00000400918 GAPVD1Q14C86 1478 aa39.21■■■■□ 3.87
FAAP20-203ENST00000400918 SNAPC4Q5SXM2 1469 aa39.2■■■■□ 3.87
FAAP20-203ENST00000400918 GRIN2BQ13224 1484 aa39.19■■■■□ 3.86
FAAP20-203ENST00000400918 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
FAAP20-203ENST00000400918 OSCARQ8IYS5 282 aa39.1■■■■□ 3.85
FAAP20-203ENST00000400918 SYNJ2O15056 1496 aa38.97■■■■□ 3.83
FAAP20-203ENST00000400918 ADAMTS12P58397 1594 aa38.94■■■■□ 3.82
FAAP20-203ENST00000400918 ERICH3Q5RHP9 1530 aa38.91■■■■□ 3.82
FAAP20-203ENST00000400918 FBLN2P98095 1184 aa38.88■■■■□ 3.81
FAAP20-203ENST00000400918 CLASP1Q7Z460 1538 aa38.82■■■■□ 3.8
FAAP20-203ENST00000400918 CHMP7Q8WUX9 453 aaPredicted RBP38.78■■■■□ 3.8
FAAP20-203ENST00000400918 GRIN2AQ12879 1464 aa38.74■■■■□ 3.79
FAAP20-203ENST00000400918 RIMBP3CA6NJZ7 1639 aa38.74■■■■□ 3.79
FAAP20-203ENST00000400918 RIMBP3BA6NNM3 1639 aa38.74■■■■□ 3.79
FAAP20-203ENST00000400918 RIMBP3Q9UFD9 1639 aa38.74■■■■□ 3.79
FAAP20-203ENST00000400918 FHAD1B1AJZ9 1412 aa38.73■■■■□ 3.79
FAAP20-203ENST00000400918 KIF27Q86VH2 1401 aa38.71■■■■□ 3.79
FAAP20-203ENST00000400918 ARHGEF11O15085 1522 aa38.68■■■■□ 3.78
FAAP20-203ENST00000400918 CEP170Q5SW79 1584 aa38.65■■■■□ 3.78
FAAP20-203ENST00000400918 IGF1RP08069 1367 aa38.63■■■■□ 3.77
FAAP20-203ENST00000400918 NUP160Q12769 1436 aa38.6■■■■□ 3.77
FAAP20-203ENST00000400918 CUL7Q14999 1698 aa38.56■■■■□ 3.76
FAAP20-203ENST00000400918 RUSC2Q8N2Y8 1516 aa38.54■■■■□ 3.76
FAAP20-203ENST00000400918 TRIM41Q8WV44 630 aa38.46■■■■□ 3.75
FAAP20-203ENST00000400918 ARAP1Q96P48 1450 aa38.41■■■■□ 3.74
FAAP20-203ENST00000400918 SHROOM2Q13796 1616 aa38.4■■■■□ 3.74
FAAP20-203ENST00000400918 CARMIL1Q5VZK9 1371 aa38.33■■■■□ 3.73
FAAP20-203ENST00000400918 ERCC6L2Q5T890 1561 aa38.32■■■■□ 3.73
FAAP20-203ENST00000400918 KIAA0586Q9BVV6 1533 aa38.16■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms