RNA–Protein interactions for RNA: ENST00000400758.6

PRKAR1B-202, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

TSL 3

Gene PRKAR1B, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-202ENST00000400758 NISCHQ9Y2I1 1504 aa61.74■■■■■ 7.47
PRKAR1B-202ENST00000400758 CCDC180Q9P1Z9 1646 aa54.95■■■■■ 6.39
PRKAR1B-202ENST00000400758 ABCC9O60706 1549 aa53.86■■■■■ 6.21
PRKAR1B-202ENST00000400758 RB1CC1Q8TDY2 1594 aa51.84■■■■■ 5.89
PRKAR1B-202ENST00000400758 NACADO15069 1562 aa51.79■■■■■ 5.88
PRKAR1B-202ENST00000400758 DCAF8L2P0C7V8 631 aa51.59■■■■■ 5.85
PRKAR1B-202ENST00000400758 MYO15BQ96JP2 1530 aa51.53■■■■■ 5.84
PRKAR1B-202ENST00000400758 ZCCHC6Q5VYS8 1495 aaKnown RBP51.39■■■■■ 5.82
PRKAR1B-202ENST00000400758 DCAF1Q9Y4B6 1507 aa51.19■■■■■ 5.79
PRKAR1B-202ENST00000400758 UNC13AQ9UPW8 1703 aa50.42■■■■■ 5.66
PRKAR1B-202ENST00000400758 PABPN1Q86U42 306 aaKnown RBP eCLIP50.31■■■■■ 5.64
PRKAR1B-202ENST00000400758 BICRAQ9NZM4 1560 aa50.18■■■■■ 5.62
PRKAR1B-202ENST00000400758 SCRIBQ14160 1630 aa49.99■■■■■ 5.59
PRKAR1B-202ENST00000400758 SHROOM4Q9ULL8 1493 aa49.89■■■■■ 5.58
PRKAR1B-202ENST00000400758 DNAJC5BQ9UF47 199 aa49.61■■■■■ 5.53
PRKAR1B-202ENST00000400758 EIF4G1Q04637 1599 aaKnown RBP48.92■■■■■ 5.42
PRKAR1B-202ENST00000400758 CC2D2AQ9P2K1 1620 aa48.72■■■■■ 5.39
PRKAR1B-202ENST00000400758 CECR2Q9BXF3 1484 aa48.49■■■■■ 5.35
PRKAR1B-202ENST00000400758 BAZ1AQ9NRL2 1556 aaPredicted RBP47.89■■■■■ 5.26
PRKAR1B-202ENST00000400758 SMARCA4P51532 1647 aa47.89■■■■■ 5.26
PRKAR1B-202ENST00000400758 NCAPD3P42695 1498 aa47.82■■■■■ 5.25
PRKAR1B-202ENST00000400758 ATAD2BQ9ULI0 1458 aa47.75■■■■■ 5.23
PRKAR1B-202ENST00000400758 SMARCA2P51531 1590 aa47.71■■■■■ 5.23
PRKAR1B-202ENST00000400758 PEG3Q9GZU2 1588 aa47.53■■■■■ 5.2
PRKAR1B-202ENST00000400758 HMGXB3Q12766 1538 aa47.51■■■■■ 5.2
PRKAR1B-202ENST00000400758 MROH2BQ7Z745 1585 aa47.49■■■■■ 5.19
PRKAR1B-202ENST00000400758 BAZ1BQ9UIG0 1483 aaKnown RBP47.33■■■■■ 5.17
PRKAR1B-202ENST00000400758 RSF1Q96T23 1441 aaPredicted RBP46.96■■■■■ 5.11
PRKAR1B-202ENST00000400758 WIZO95785 1651 aa46.9■■■■■ 5.1
PRKAR1B-202ENST00000400758 LAMC3Q9Y6N6 1575 aa46.52■■■■■ 5.04
PRKAR1B-202ENST00000400758 NESP48681 1621 aa46.52■■■■■ 5.04
PRKAR1B-202ENST00000400758 TOP2AP11388 1531 aaKnown RBP46.52■■■■■ 5.04
PRKAR1B-202ENST00000400758 ERCC6Q03468 1493 aa46.51■■■■■ 5.04
PRKAR1B-202ENST00000400758 CADPSQ9ULU8 1353 aa46.4■■■■■ 5.02
PRKAR1B-202ENST00000400758 PDS5BQ9NTI5 1447 aa46.29■■■■■ 5
PRKAR1B-202ENST00000400758 CUX2O14529 1486 aa46.18■■■■■ 4.98
PRKAR1B-202ENST00000400758 CFTRP13569 1480 aa46.07■■■■■ 4.97
PRKAR1B-202ENST00000400758 CCDC88BA6NC98 1476 aa45.97■■■■■ 4.95
PRKAR1B-202ENST00000400758 KIF21AQ7Z4S6 1674 aa45.91■■■■■ 4.94
PRKAR1B-202ENST00000400758 THOC2Q8NI27 1593 aaKnown RBP45.88■■■■■ 4.94
PRKAR1B-202ENST00000400758 FANCD2Q9BXW9 1451 aa45.8■■■■■ 4.92
PRKAR1B-202ENST00000400758 CEP164Q9UPV0 1460 aa45.76■■■■■ 4.92
PRKAR1B-202ENST00000400758 MRC2Q9UBG0 1479 aa45.74■■■■■ 4.91
PRKAR1B-202ENST00000400758 WDR62O43379 1518 aa45.59■■■■■ 4.89
PRKAR1B-202ENST00000400758 SUPT5HO00267 1087 aaKnown RBP45.56■■■■■ 4.88
PRKAR1B-202ENST00000400758 PRDM2Q13029 1718 aa45.52■■■■■ 4.88
PRKAR1B-202ENST00000400758 URB2Q14146 1524 aaKnown RBP45.3■■■■■ 4.84
PRKAR1B-202ENST00000400758 ABCC8Q09428 1581 aa45.16■■■■■ 4.82
PRKAR1B-202ENST00000400758 TOPBP1Q92547 1522 aa45.02■■■■■ 4.8
PRKAR1B-202ENST00000400758 DNAJC5Q9H3Z4 198 aa44.98■■■■■ 4.79
PRKAR1B-202ENST00000400758 DNMBPQ6XZF7 1577 aa44.96■■■■■ 4.79
PRKAR1B-202ENST00000400758 IFT140Q96RY7 1462 aa44.86■■■■■ 4.77
PRKAR1B-202ENST00000400758 POLA1P09884 1462 aaPredicted RBP44.64■■■■■ 4.74
PRKAR1B-202ENST00000400758 CUX1P39880 1505 aa44.57■■■■■ 4.73
PRKAR1B-202ENST00000400758 ZNF608Q9ULD9 1512 aaPredicted RBP44.55■■■■■ 4.72
PRKAR1B-202ENST00000400758 TARBP1Q13395 1621 aaKnown RBP44.51■■■■■ 4.72
PRKAR1B-202ENST00000400758 SOGA1O94964 1423 aa44.5■■■■■ 4.71
PRKAR1B-202ENST00000400758 FGD5Q6ZNL6 1462 aa44.47■■■■■ 4.71
PRKAR1B-202ENST00000400758 RAD54L2Q9Y4B4 1467 aa44.39■■■■■ 4.7
PRKAR1B-202ENST00000400758 EIF4G3O43432 1585 aaKnown RBP44.35■■■■■ 4.69
PRKAR1B-202ENST00000400758 WRNQ14191 1432 aaPredicted RBP eCLIP44.31■■■■■ 4.689e-6■■■■■ 50.1
PRKAR1B-202ENST00000400758 AQRO60306 1485 aaKnown RBP eCLIP44.3■■■■■ 4.68
PRKAR1B-202ENST00000400758 WDR97A6NE52 1622 aa44.3■■■■■ 4.68
PRKAR1B-202ENST00000400758 OSCARQ8IYS5 282 aa44.26■■■■■ 4.68
PRKAR1B-202ENST00000400758 TDRD9Q8NDG6 1382 aaKnown RBP44.21■■■■■ 4.67
PRKAR1B-202ENST00000400758 TOP2BQ02880 1626 aa44.18■■■■■ 4.66
PRKAR1B-202ENST00000400758 BIVM-ERCC5R4GMW8 1640 aa44.14■■■■■ 4.66
PRKAR1B-202ENST00000400758 ABCA10Q8WWZ4 1543 aa44.11■■■■■ 4.65
PRKAR1B-202ENST00000400758 SYNJ1O43426 1573 aa44.08■■■■■ 4.65
PRKAR1B-202ENST00000400758 GRIN2BQ13224 1484 aa44.02■■■■■ 4.64
PRKAR1B-202ENST00000400758 GAPVD1Q14C86 1478 aa43.96■■■■■ 4.63
PRKAR1B-202ENST00000400758 MAGI1Q96QZ7 1491 aaPredicted RBP43.93■■■■■ 4.62
PRKAR1B-202ENST00000400758 SNAPC4Q5SXM2 1469 aa43.89■■■■■ 4.62
PRKAR1B-202ENST00000400758 ABCA5Q8WWZ7 1642 aa43.86■■■■■ 4.61
PRKAR1B-202ENST00000400758 FBLN2P98095 1184 aa43.82■■■■■ 4.61
PRKAR1B-202ENST00000400758 CHMP7Q8WUX9 453 aaPredicted RBP43.76■■■■■ 4.6
PRKAR1B-202ENST00000400758 SYNJ2O15056 1496 aa43.75■■■■■ 4.59
PRKAR1B-202ENST00000400758 CHD1O14646 1710 aa43.73■■■■■ 4.59
PRKAR1B-202ENST00000400758 PBRM1Q86U86 1689 aa43.72■■■■■ 4.59
PRKAR1B-202ENST00000400758 ERICH3Q5RHP9 1530 aa43.59■■■■■ 4.57
PRKAR1B-202ENST00000400758 FHAD1B1AJZ9 1412 aa43.49■■■■■ 4.55
PRKAR1B-202ENST00000400758 KIF27Q86VH2 1401 aa43.45■■■■■ 4.55
PRKAR1B-202ENST00000400758 ADAMTS12P58397 1594 aa43.45■■■■■ 4.55
PRKAR1B-202ENST00000400758 ARHGEF11O15085 1522 aa43.42■■■■■ 4.54
PRKAR1B-202ENST00000400758 CLASP1Q7Z460 1538 aa43.41■■■■■ 4.54
PRKAR1B-202ENST00000400758 GRIN2AQ12879 1464 aa43.4■■■■■ 4.54
PRKAR1B-202ENST00000400758 RIMBP3CA6NJZ7 1639 aa43.37■■■■■ 4.53
PRKAR1B-202ENST00000400758 RIMBP3BA6NNM3 1639 aa43.37■■■■■ 4.53
PRKAR1B-202ENST00000400758 RIMBP3Q9UFD9 1639 aa43.37■■■■■ 4.53
PRKAR1B-202ENST00000400758 IGF1RP08069 1367 aa43.28■■■■■ 4.52
PRKAR1B-202ENST00000400758 TRIM41Q8WV44 630 aa43.27■■■■■ 4.52
PRKAR1B-202ENST00000400758 NUP160Q12769 1436 aa43.26■■■■■ 4.52
PRKAR1B-202ENST00000400758 CEP170Q5SW79 1584 aa43.11■■■■■ 4.49
PRKAR1B-202ENST00000400758 CUL7Q14999 1698 aa43.1■■■■■ 4.49
PRKAR1B-202ENST00000400758 CYB5RLQ6IPT4 315 aa43.05■■■■■ 4.48
PRKAR1B-202ENST00000400758 ARAP1Q96P48 1450 aa43.03■■■■■ 4.48
PRKAR1B-202ENST00000400758 CARMIL1Q5VZK9 1371 aa43.01■■■■■ 4.48
PRKAR1B-202ENST00000400758 SHROOM2Q13796 1616 aa42.88■■■■■ 4.45
PRKAR1B-202ENST00000400758 JPH4Q96JJ6 628 aa42.84■■■■■ 4.45
PRKAR1B-202ENST00000400758 KIAA0586Q9BVV6 1533 aa42.82■■■■■ 4.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms