RNA–Protein interactions for RNA: ENST00000400270.6

ATP13A4-204, Transcript of ATPase 13A4, humanhuman

TSL 1 (best) BASIC

Gene ATP13A4, Length 1,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-204ENST00000400270 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
ATP13A4-204ENST00000400270 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
ATP13A4-204ENST00000400270 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
ATP13A4-204ENST00000400270 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
ATP13A4-204ENST00000400270 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
ATP13A4-204ENST00000400270 FOXD1Q16676 465 aa17.13■□□□□ 0.33
ATP13A4-204ENST00000400270 MSH5O43196 834 aa16.32■□□□□ 0.2
ATP13A4-204ENST00000400270 NISCHQ9Y2I1 1504 aa15.93■□□□□ 0.14
ATP13A4-204ENST00000400270 PIAS4Q8N2W9 510 aaPredicted RBP15.8■□□□□ 0.12
ATP13A4-204ENST00000400270 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
ATP13A4-204ENST00000400270 ADRA2BP18089 450 aa15.31■□□□□ 0.04
ATP13A4-204ENST00000400270 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
ATP13A4-204ENST00000400270 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
ATP13A4-204ENST00000400270 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
ATP13A4-204ENST00000400270 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
ATP13A4-204ENST00000400270 ABCC9O60706 1549 aa14.26□□□□□ -0.13
ATP13A4-204ENST00000400270 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
ATP13A4-204ENST00000400270 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
ATP13A4-204ENST00000400270 RNF39Q9H2S5 420 aa13.87□□□□□ -0.19
ATP13A4-204ENST00000400270 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
ATP13A4-204ENST00000400270 C1QBPQ07021 282 aaKnown RBP13.6□□□□□ -0.23
ATP13A4-204ENST00000400270 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
ATP13A4-204ENST00000400270 RB1CC1Q8TDY2 1594 aa13.53□□□□□ -0.24
ATP13A4-204ENST00000400270 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
ATP13A4-204ENST00000400270 NACADO15069 1562 aa13.44□□□□□ -0.26
ATP13A4-204ENST00000400270 POTEHQ6S545 545 aa13.36□□□□□ -0.27
ATP13A4-204ENST00000400270 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
ATP13A4-204ENST00000400270 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATP13A4-204ENST00000400270 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
ATP13A4-204ENST00000400270 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
ATP13A4-204ENST00000400270 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
ATP13A4-204ENST00000400270 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.29
ATP13A4-204ENST00000400270 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.3
ATP13A4-204ENST00000400270 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
ATP13A4-204ENST00000400270 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
ATP13A4-204ENST00000400270 DCAF1Q9Y4B6 1507 aa13.11□□□□□ -0.31
ATP13A4-204ENST00000400270 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
ATP13A4-204ENST00000400270 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
ATP13A4-204ENST00000400270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
ATP13A4-204ENST00000400270 CC2D2AQ9P2K1 1620 aa12.85□□□□□ -0.35
ATP13A4-204ENST00000400270 EIF4G1Q04637 1599 aaKnown RBP12.83□□□□□ -0.36
ATP13A4-204ENST00000400270 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
ATP13A4-204ENST00000400270 DSG3P32926 999 aa12.72□□□□□ -0.37
ATP13A4-204ENST00000400270 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
ATP13A4-204ENST00000400270 CAPN15O75808 1086 aa12.57□□□□□ -0.4
ATP13A4-204ENST00000400270 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
ATP13A4-204ENST00000400270 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
ATP13A4-204ENST00000400270 NCAPD3P42695 1498 aa12.42□□□□□ -0.42
ATP13A4-204ENST00000400270 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
ATP13A4-204ENST00000400270 ATAD2BQ9ULI0 1458 aa12.41□□□□□ -0.42
ATP13A4-204ENST00000400270 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
ATP13A4-204ENST00000400270 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
ATP13A4-204ENST00000400270 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
ATP13A4-204ENST00000400270 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
ATP13A4-204ENST00000400270 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
ATP13A4-204ENST00000400270 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
ATP13A4-204ENST00000400270 ERCC6Q03468 1493 aa12.28□□□□□ -0.44
ATP13A4-204ENST00000400270 NESP48681 1621 aa12.28□□□□□ -0.44
ATP13A4-204ENST00000400270 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
ATP13A4-204ENST00000400270 ABCB7O75027 752 aa12.22□□□□□ -0.45
ATP13A4-204ENST00000400270 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
ATP13A4-204ENST00000400270 CUX2O14529 1486 aa12.19□□□□□ -0.46
ATP13A4-204ENST00000400270 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
ATP13A4-204ENST00000400270 WIZO95785 1651 aa12.17□□□□□ -0.46
ATP13A4-204ENST00000400270 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
ATP13A4-204ENST00000400270 DNAJC5Q9H3Z4 198 aa12.15□□□□□ -0.46
ATP13A4-204ENST00000400270 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
ATP13A4-204ENST00000400270 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
ATP13A4-204ENST00000400270 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
ATP13A4-204ENST00000400270 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
ATP13A4-204ENST00000400270 THOC2Q8NI27 1593 aaKnown RBP12.08□□□□□ -0.47
ATP13A4-204ENST00000400270 APLP2Q06481 763 aa12.08□□□□□ -0.48
ATP13A4-204ENST00000400270 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
ATP13A4-204ENST00000400270 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
ATP13A4-204ENST00000400270 CADPSQ9ULU8 1353 aa12.06□□□□□ -0.48
ATP13A4-204ENST00000400270 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
ATP13A4-204ENST00000400270 MRC2Q9UBG0 1479 aa11.97□□□□□ -0.49
ATP13A4-204ENST00000400270 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
ATP13A4-204ENST00000400270 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
ATP13A4-204ENST00000400270 CFTRP13569 1480 aa11.93□□□□□ -0.5
ATP13A4-204ENST00000400270 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
ATP13A4-204ENST00000400270 WDR62O43379 1518 aa11.92□□□□□ -0.5
ATP13A4-204ENST00000400270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
ATP13A4-204ENST00000400270 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
ATP13A4-204ENST00000400270 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
ATP13A4-204ENST00000400270 URB2Q14146 1524 aaKnown RBP11.85□□□□□ -0.51
ATP13A4-204ENST00000400270 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
ATP13A4-204ENST00000400270 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
ATP13A4-204ENST00000400270 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
ATP13A4-204ENST00000400270 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
ATP13A4-204ENST00000400270 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
ATP13A4-204ENST00000400270 ZNF608Q9ULD9 1512 aaPredicted RBP11.71□□□□□ -0.54
ATP13A4-204ENST00000400270 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
ATP13A4-204ENST00000400270 HAX1O00165 279 aa11.69□□□□□ -0.54
ATP13A4-204ENST00000400270 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
ATP13A4-204ENST00000400270 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
ATP13A4-204ENST00000400270 POLA2Q14181 598 aa11.68□□□□□ -0.54
ATP13A4-204ENST00000400270 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
ATP13A4-204ENST00000400270 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
ATP13A4-204ENST00000400270 ABCC8Q09428 1581 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms