RNA–Protein interactions for RNA: ENST00000400056.3

KRT18P13-201, Transcript of keratin 18 pseudogene 13, humanhuman

BASIC

Gene KRT18P13, Length 1,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P13-201ENST00000400056 NISCHQ9Y2I1 1504 aa43.28■■■■■ 4.52
KRT18P13-201ENST00000400056 ABCC9O60706 1549 aa39.65■■■■□ 3.94
KRT18P13-201ENST00000400056 CCDC180Q9P1Z9 1646 aa39.12■■■■□ 3.85
KRT18P13-201ENST00000400056 DNAJC5BQ9UF47 199 aa37.6■■■■□ 3.61
KRT18P13-201ENST00000400056 RB1CC1Q8TDY2 1594 aa37.52■■■■□ 3.6
KRT18P13-201ENST00000400056 NACADO15069 1562 aa37.11■■■■□ 3.53
KRT18P13-201ENST00000400056 DCAF8L2P0C7V8 631 aa36.8■■■■□ 3.48
KRT18P13-201ENST00000400056 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
KRT18P13-201ENST00000400056 UNC13AQ9UPW8 1703 aa36.6■■■■□ 3.45
KRT18P13-201ENST00000400056 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
KRT18P13-201ENST00000400056 BICRAQ9NZM4 1560 aa36.39■■■■□ 3.42
KRT18P13-201ENST00000400056 SHROOM4Q9ULL8 1493 aa35.92■■■■□ 3.34
KRT18P13-201ENST00000400056 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
KRT18P13-201ENST00000400056 CC2D2AQ9P2K1 1620 aa35.78■■■■□ 3.32
KRT18P13-201ENST00000400056 ZCCHC6Q5VYS8 1495 aaKnown RBP35.76■■■■□ 3.32
KRT18P13-201ENST00000400056 DCAF1Q9Y4B6 1507 aa35.73■■■■□ 3.31
KRT18P13-201ENST00000400056 SCRIBQ14160 1630 aa35.61■■■■□ 3.29
KRT18P13-201ENST00000400056 EIF4G1Q04637 1599 aaKnown RBP35.58■■■■□ 3.29
KRT18P13-201ENST00000400056 DNAJC5Q9H3Z4 198 aa35■■■■□ 3.19
KRT18P13-201ENST00000400056 CUX2O14529 1486 aa34.43■■■■□ 3.1
KRT18P13-201ENST00000400056 ERCC6Q03468 1493 aa34.33■■■■□ 3.09
KRT18P13-201ENST00000400056 NCAPD3P42695 1498 aa34.24■■■■□ 3.07
KRT18P13-201ENST00000400056 ATAD2BQ9ULI0 1458 aa34.06■■■■□ 3.04
KRT18P13-201ENST00000400056 SMARCA2P51531 1590 aa33.98■■■■□ 3.03
KRT18P13-201ENST00000400056 HMGXB3Q12766 1538 aa33.97■■■■□ 3.03
KRT18P13-201ENST00000400056 SMARCA4P51532 1647 aa33.9■■■■□ 3.02
KRT18P13-201ENST00000400056 NESP48681 1621 aa33.88■■■■□ 3.01
KRT18P13-201ENST00000400056 BAZ1BQ9UIG0 1483 aaKnown RBP33.75■■■□□ 2.99
KRT18P13-201ENST00000400056 THOC2Q8NI27 1593 aaKnown RBP33.67■■■□□ 2.98
KRT18P13-201ENST00000400056 BAZ1AQ9NRL2 1556 aaPredicted RBP33.67■■■□□ 2.98
KRT18P13-201ENST00000400056 LAMC3Q9Y6N6 1575 aa33.6■■■□□ 2.97
KRT18P13-201ENST00000400056 PEG3Q9GZU2 1588 aa33.56■■■□□ 2.96
KRT18P13-201ENST00000400056 KIF21AQ7Z4S6 1674 aa33.44■■■□□ 2.94
KRT18P13-201ENST00000400056 PDS5BQ9NTI5 1447 aa33.44■■■□□ 2.94
KRT18P13-201ENST00000400056 MROH2BQ7Z745 1585 aa33.33■■■□□ 2.93
KRT18P13-201ENST00000400056 TRIM41Q8WV44 630 aa33.28■■■□□ 2.92
KRT18P13-201ENST00000400056 CADPSQ9ULU8 1353 aa33.19■■■□□ 2.9
KRT18P13-201ENST00000400056 MRC2Q9UBG0 1479 aa33.18■■■□□ 2.9
KRT18P13-201ENST00000400056 WDR62O43379 1518 aa33.09■■■□□ 2.89
KRT18P13-201ENST00000400056 CEP164Q9UPV0 1460 aa32.94■■■□□ 2.86
KRT18P13-201ENST00000400056 WIZO95785 1651 aa32.91■■■□□ 2.86
KRT18P13-201ENST00000400056 FANCD2Q9BXW9 1451 aa32.83■■■□□ 2.85
KRT18P13-201ENST00000400056 OSCARQ8IYS5 282 aa32.74■■■□□ 2.83
KRT18P13-201ENST00000400056 CFTRP13569 1480 aa32.69■■■□□ 2.82
KRT18P13-201ENST00000400056 URB2Q14146 1524 aaKnown RBP32.57■■■□□ 2.8
KRT18P13-201ENST00000400056 TOP2AP11388 1531 aaKnown RBP32.49■■■□□ 2.79
KRT18P13-201ENST00000400056 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
KRT18P13-201ENST00000400056 RIMBP3CA6NJZ7 1639 aa32.38■■■□□ 2.77
KRT18P13-201ENST00000400056 RIMBP3BA6NNM3 1639 aa32.38■■■□□ 2.77
KRT18P13-201ENST00000400056 RIMBP3Q9UFD9 1639 aa32.38■■■□□ 2.77
KRT18P13-201ENST00000400056 PRDM2Q13029 1718 aa32.32■■■□□ 2.76
KRT18P13-201ENST00000400056 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
KRT18P13-201ENST00000400056 ZNF608Q9ULD9 1512 aaPredicted RBP32.26■■■□□ 2.75
KRT18P13-201ENST00000400056 ARHGEF11O15085 1522 aa32.23■■■□□ 2.75
KRT18P13-201ENST00000400056 TOPBP1Q92547 1522 aa32.13■■■□□ 2.73
KRT18P13-201ENST00000400056 EIF4G3O43432 1585 aaKnown RBP32.09■■■□□ 2.73
KRT18P13-201ENST00000400056 CCDC88BA6NC98 1476 aa32.09■■■□□ 2.73
KRT18P13-201ENST00000400056 ABCC8Q09428 1581 aa32.06■■■□□ 2.72
KRT18P13-201ENST00000400056 CYB5RLQ6IPT4 315 aa32.01■■■□□ 2.71
KRT18P13-201ENST00000400056 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
KRT18P13-201ENST00000400056 CHD1O14646 1710 aa31.94■■■□□ 2.7
KRT18P13-201ENST00000400056 AQRO60306 1485 aaKnown RBP eCLIP31.9■■■□□ 2.7
KRT18P13-201ENST00000400056 TRHP20396 242 aaPredicted RBP31.89■■■□□ 2.7
KRT18P13-201ENST00000400056 TARBP1Q13395 1621 aaKnown RBP31.87■■■□□ 2.69
KRT18P13-201ENST00000400056 ARAP1Q96P48 1450 aa31.86■■■□□ 2.69
KRT18P13-201ENST00000400056 FBLN2P98095 1184 aa31.85■■■□□ 2.69
KRT18P13-201ENST00000400056 POLA1P09884 1462 aaPredicted RBP31.77■■■□□ 2.68
KRT18P13-201ENST00000400056 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
KRT18P13-201ENST00000400056 TDRD9Q8NDG6 1382 aaKnown RBP31.62■■■□□ 2.65
KRT18P13-201ENST00000400056 SOGA1O94964 1423 aa31.61■■■□□ 2.65
KRT18P13-201ENST00000400056 SNAPC4Q5SXM2 1469 aa31.59■■■□□ 2.65
KRT18P13-201ENST00000400056 WDR97A6NE52 1622 aa31.57■■■□□ 2.64
KRT18P13-201ENST00000400056 CLASP1Q7Z460 1538 aa31.55■■■□□ 2.64
KRT18P13-201ENST00000400056 SYNJ1O43426 1573 aa31.53■■■□□ 2.64
KRT18P13-201ENST00000400056 CHMP7Q8WUX9 453 aaPredicted RBP31.51■■■□□ 2.63
KRT18P13-201ENST00000400056 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
KRT18P13-201ENST00000400056 MAGI1Q96QZ7 1491 aaPredicted RBP31.49■■■□□ 2.63
KRT18P13-201ENST00000400056 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
KRT18P13-201ENST00000400056 AEBP2Q6ZN18 517 aaPredicted RBP31.4■■■□□ 2.62
KRT18P13-201ENST00000400056 SYNJ2O15056 1496 aa31.4■■■□□ 2.62
KRT18P13-201ENST00000400056 CUX1P39880 1505 aa31.36■■■□□ 2.61
KRT18P13-201ENST00000400056 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
KRT18P13-201ENST00000400056 PBRM1Q86U86 1689 aa31.25■■■□□ 2.59
KRT18P13-201ENST00000400056 ABCA5Q8WWZ7 1642 aa31.1■■■□□ 2.57
KRT18P13-201ENST00000400056 ABCA10Q8WWZ4 1543 aa31.1■■■□□ 2.57
KRT18P13-201ENST00000400056 GRIN2AQ12879 1464 aa31.01■■■□□ 2.56
KRT18P13-201ENST00000400056 ERCC6L2Q5T890 1561 aa31■■■□□ 2.55
KRT18P13-201ENST00000400056 CEP170Q5SW79 1584 aa30.94■■■□□ 2.54
KRT18P13-201ENST00000400056 ADAMTS12P58397 1594 aa30.93■■■□□ 2.54
KRT18P13-201ENST00000400056 NUP160Q12769 1436 aa30.91■■■□□ 2.54
KRT18P13-201ENST00000400056 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
KRT18P13-201ENST00000400056 SHROOM2Q13796 1616 aa30.84■■■□□ 2.53
KRT18P13-201ENST00000400056 FHAD1B1AJZ9 1412 aa30.81■■■□□ 2.52
KRT18P13-201ENST00000400056 KIF13AQ9H1H9 1805 aa30.73■■■□□ 2.51
KRT18P13-201ENST00000400056 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
KRT18P13-201ENST00000400056 BIVM-ERCC5R4GMW8 1640 aa30.72■■■□□ 2.51
KRT18P13-201ENST00000400056 ERICH3Q5RHP9 1530 aa30.72■■■□□ 2.51
KRT18P13-201ENST00000400056 PRG4Q92954 1404 aaPredicted RBP30.68■■■□□ 2.5
KRT18P13-201ENST00000400056 SUPT5HO00267 1087 aaKnown RBP30.61■■■□□ 2.49
KRT18P13-201ENST00000400056 JPH4Q96JJ6 628 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms