RNA–Protein interactions for RNA: ENST00000399423.8

TINF2-202, Transcript of TERF1 interacting nuclear factor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TINF2, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TINF2-202ENST00000399423 NISCHQ9Y2I1 1504 aa34.75■■■■□ 3.15
TINF2-202ENST00000399423 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.42
TINF2-202ENST00000399423 ZCCHC6Q5VYS8 1495 aaKnown RBP29.17■■■□□ 2.26
TINF2-202ENST00000399423 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
TINF2-202ENST00000399423 ABCC9O60706 1549 aa28.84■■■□□ 2.21
TINF2-202ENST00000399423 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
TINF2-202ENST00000399423 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.16
TINF2-202ENST00000399423 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
TINF2-202ENST00000399423 NACADO15069 1562 aa28.17■■■□□ 2.1
TINF2-202ENST00000399423 RB1CC1Q8TDY2 1594 aa27.96■■■□□ 2.07
TINF2-202ENST00000399423 SCRIBQ14160 1630 aa27.95■■■□□ 2.06
TINF2-202ENST00000399423 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
TINF2-202ENST00000399423 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
TINF2-202ENST00000399423 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
TINF2-202ENST00000399423 BICRAQ9NZM4 1560 aa27.24■■□□□ 1.95
TINF2-202ENST00000399423 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
TINF2-202ENST00000399423 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
TINF2-202ENST00000399423 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
TINF2-202ENST00000399423 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
TINF2-202ENST00000399423 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
TINF2-202ENST00000399423 WIZO95785 1651 aa26.7■■□□□ 1.86
TINF2-202ENST00000399423 EIF4G1Q04637 1599 aaKnown RBP26.39■■□□□ 1.82
TINF2-202ENST00000399423 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
TINF2-202ENST00000399423 ATAD2BQ9ULI0 1458 aa26.32■■□□□ 1.8
TINF2-202ENST00000399423 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
TINF2-202ENST00000399423 SMARCA2P51531 1590 aa26.21■■□□□ 1.79
TINF2-202ENST00000399423 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
TINF2-202ENST00000399423 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
TINF2-202ENST00000399423 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
TINF2-202ENST00000399423 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
TINF2-202ENST00000399423 CC2D2AQ9P2K1 1620 aa26.04■■□□□ 1.76
TINF2-202ENST00000399423 HMGXB3Q12766 1538 aa25.97■■□□□ 1.75
TINF2-202ENST00000399423 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
TINF2-202ENST00000399423 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
TINF2-202ENST00000399423 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
TINF2-202ENST00000399423 CFTRP13569 1480 aa25.49■■□□□ 1.67
TINF2-202ENST00000399423 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
TINF2-202ENST00000399423 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
TINF2-202ENST00000399423 NESP48681 1621 aa25.34■■□□□ 1.65
TINF2-202ENST00000399423 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
TINF2-202ENST00000399423 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
TINF2-202ENST00000399423 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
TINF2-202ENST00000399423 HRCP23327 699 aa25.25■■□□□ 1.63
TINF2-202ENST00000399423 PRDM2Q13029 1718 aa25.24■■□□□ 1.63
TINF2-202ENST00000399423 PCGF6Q9BYE7 350 aa25.2■■□□□ 1.62
TINF2-202ENST00000399423 CUX1P39880 1505 aa25.15■■□□□ 1.62
TINF2-202ENST00000399423 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
TINF2-202ENST00000399423 LAMC3Q9Y6N6 1575 aa25.14■■□□□ 1.62
TINF2-202ENST00000399423 SOGA1O94964 1423 aa25.14■■□□□ 1.61
TINF2-202ENST00000399423 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
TINF2-202ENST00000399423 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
TINF2-202ENST00000399423 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
TINF2-202ENST00000399423 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
TINF2-202ENST00000399423 PDS5BQ9NTI5 1447 aa24.97■■□□□ 1.59
TINF2-202ENST00000399423 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
TINF2-202ENST00000399423 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
TINF2-202ENST00000399423 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
TINF2-202ENST00000399423 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
TINF2-202ENST00000399423 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
TINF2-202ENST00000399423 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
TINF2-202ENST00000399423 DNMBPQ6XZF7 1577 aa24.86■■□□□ 1.57
TINF2-202ENST00000399423 EEA1Q15075 1411 aa24.85■■□□□ 1.57
TINF2-202ENST00000399423 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
TINF2-202ENST00000399423 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
TINF2-202ENST00000399423 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
TINF2-202ENST00000399423 CUX2O14529 1486 aa24.7■■□□□ 1.55
TINF2-202ENST00000399423 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
TINF2-202ENST00000399423 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
TINF2-202ENST00000399423 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
TINF2-202ENST00000399423 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
TINF2-202ENST00000399423 ABCA10Q8WWZ4 1543 aa24.6■■□□□ 1.53
TINF2-202ENST00000399423 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
TINF2-202ENST00000399423 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
TINF2-202ENST00000399423 KIF21BO75037 1637 aa24.58■■□□□ 1.53
TINF2-202ENST00000399423 UBTFP17480 764 aaKnown RBP24.58■■□□□ 1.53
TINF2-202ENST00000399423 IGF1RP08069 1367 aa24.56■■□□□ 1.52
TINF2-202ENST00000399423 PRXQ9BXM0 1461 aa24.55■■□□□ 1.52
TINF2-202ENST00000399423 WDR62O43379 1518 aa24.54■■□□□ 1.52
TINF2-202ENST00000399423 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
TINF2-202ENST00000399423 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
TINF2-202ENST00000399423 THOC2Q8NI27 1593 aaKnown RBP24.51■■□□□ 1.51
TINF2-202ENST00000399423 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
TINF2-202ENST00000399423 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
TINF2-202ENST00000399423 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
TINF2-202ENST00000399423 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
TINF2-202ENST00000399423 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
TINF2-202ENST00000399423 CARMIL1Q5VZK9 1371 aa24.41■■□□□ 1.5
TINF2-202ENST00000399423 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.49
TINF2-202ENST00000399423 AQRO60306 1485 aaKnown RBP eCLIP24.37■■□□□ 1.492e-7■■■■■ 29
TINF2-202ENST00000399423 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
TINF2-202ENST00000399423 RANGAP1P46060 587 aaPredicted RBP24.35■■□□□ 1.49
TINF2-202ENST00000399423 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
TINF2-202ENST00000399423 CUL7Q14999 1698 aa24.24■■□□□ 1.47
TINF2-202ENST00000399423 CLIP1P30622 1438 aa24.24■■□□□ 1.47
TINF2-202ENST00000399423 PBRM1Q86U86 1689 aa24.22■■□□□ 1.47
TINF2-202ENST00000399423 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
TINF2-202ENST00000399423 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
TINF2-202ENST00000399423 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
TINF2-202ENST00000399423 ADAMTS12P58397 1594 aa24.09■■□□□ 1.45
TINF2-202ENST00000399423 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms