RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
TUBA4A-203ENST00000398989 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
TUBA4A-203ENST00000398989 ABCC9O60706 1549 aa29.83■■■□□ 2.37
TUBA4A-203ENST00000398989 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
TUBA4A-203ENST00000398989 NACADO15069 1562 aa28.57■■■□□ 2.16
TUBA4A-203ENST00000398989 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
TUBA4A-203ENST00000398989 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
TUBA4A-203ENST00000398989 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
TUBA4A-203ENST00000398989 DCAF1Q9Y4B6 1507 aa28.18■■■□□ 2.1
TUBA4A-203ENST00000398989 UNC13AQ9UPW8 1703 aa28.06■■■□□ 2.08
TUBA4A-203ENST00000398989 PABPN1Q86U42 306 aaKnown RBP eCLIP27.84■■■□□ 2.05
TUBA4A-203ENST00000398989 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
TUBA4A-203ENST00000398989 SCRIBQ14160 1630 aa27.75■■■□□ 2.03
TUBA4A-203ENST00000398989 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
TUBA4A-203ENST00000398989 DNAJC5BQ9UF47 199 aa27.44■■□□□ 1.98
TUBA4A-203ENST00000398989 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
TUBA4A-203ENST00000398989 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
TUBA4A-203ENST00000398989 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
TUBA4A-203ENST00000398989 SMARCA4P51532 1647 aa26.51■■□□□ 1.83
TUBA4A-203ENST00000398989 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
TUBA4A-203ENST00000398989 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
TUBA4A-203ENST00000398989 NCAPD3P42695 1498 aa26.34■■□□□ 1.81
TUBA4A-203ENST00000398989 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
TUBA4A-203ENST00000398989 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
TUBA4A-203ENST00000398989 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
TUBA4A-203ENST00000398989 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
TUBA4A-203ENST00000398989 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
TUBA4A-203ENST00000398989 WIZO95785 1651 aa26.03■■□□□ 1.76
TUBA4A-203ENST00000398989 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
TUBA4A-203ENST00000398989 NESP48681 1621 aa25.79■■□□□ 1.72
TUBA4A-203ENST00000398989 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
TUBA4A-203ENST00000398989 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
TUBA4A-203ENST00000398989 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
TUBA4A-203ENST00000398989 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
TUBA4A-203ENST00000398989 KIF21AQ7Z4S6 1674 aa25.53■■□□□ 1.68
TUBA4A-203ENST00000398989 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
TUBA4A-203ENST00000398989 CUX2O14529 1486 aa25.47■■□□□ 1.67
TUBA4A-203ENST00000398989 THOC2Q8NI27 1593 aaKnown RBP25.44■■□□□ 1.66
TUBA4A-203ENST00000398989 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
TUBA4A-203ENST00000398989 CFTRP13569 1480 aa25.4■■□□□ 1.66
TUBA4A-203ENST00000398989 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
TUBA4A-203ENST00000398989 PRDM2Q13029 1718 aa25.3■■□□□ 1.64
TUBA4A-203ENST00000398989 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
TUBA4A-203ENST00000398989 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
TUBA4A-203ENST00000398989 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
TUBA4A-203ENST00000398989 WDR62O43379 1518 aa25.2■■□□□ 1.62
TUBA4A-203ENST00000398989 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
TUBA4A-203ENST00000398989 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
TUBA4A-203ENST00000398989 DNMBPQ6XZF7 1577 aa24.87■■□□□ 1.57
TUBA4A-203ENST00000398989 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
TUBA4A-203ENST00000398989 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
TUBA4A-203ENST00000398989 IFT140Q96RY7 1462 aa24.75■■□□□ 1.55
TUBA4A-203ENST00000398989 CUX1P39880 1505 aa24.67■■□□□ 1.54
TUBA4A-203ENST00000398989 POLA1P09884 1462 aaPredicted RBP24.67■■□□□ 1.54
TUBA4A-203ENST00000398989 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
TUBA4A-203ENST00000398989 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
TUBA4A-203ENST00000398989 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
TUBA4A-203ENST00000398989 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
TUBA4A-203ENST00000398989 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.52
TUBA4A-203ENST00000398989 SOGA1O94964 1423 aa24.56■■□□□ 1.52
TUBA4A-203ENST00000398989 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
TUBA4A-203ENST00000398989 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
TUBA4A-203ENST00000398989 BIVM-ERCC5R4GMW8 1640 aa24.45■■□□□ 1.5
TUBA4A-203ENST00000398989 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
TUBA4A-203ENST00000398989 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
TUBA4A-203ENST00000398989 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
TUBA4A-203ENST00000398989 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
TUBA4A-203ENST00000398989 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
TUBA4A-203ENST00000398989 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
TUBA4A-203ENST00000398989 CHD1O14646 1710 aa24.33■■□□□ 1.49
TUBA4A-203ENST00000398989 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
TUBA4A-203ENST00000398989 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
TUBA4A-203ENST00000398989 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
TUBA4A-203ENST00000398989 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
TUBA4A-203ENST00000398989 SNAPC4Q5SXM2 1469 aa24.28■■□□□ 1.48
TUBA4A-203ENST00000398989 FBLN2P98095 1184 aa24.24■■□□□ 1.47
TUBA4A-203ENST00000398989 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
TUBA4A-203ENST00000398989 SYNJ2O15056 1496 aa24.14■■□□□ 1.46
TUBA4A-203ENST00000398989 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
TUBA4A-203ENST00000398989 ADAMTS12P58397 1594 aa24.07■■□□□ 1.44
TUBA4A-203ENST00000398989 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
TUBA4A-203ENST00000398989 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
TUBA4A-203ENST00000398989 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
TUBA4A-203ENST00000398989 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
TUBA4A-203ENST00000398989 ARHGEF11O15085 1522 aa24.02■■□□□ 1.44
TUBA4A-203ENST00000398989 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
TUBA4A-203ENST00000398989 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
TUBA4A-203ENST00000398989 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
TUBA4A-203ENST00000398989 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
TUBA4A-203ENST00000398989 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
TUBA4A-203ENST00000398989 CEP170Q5SW79 1584 aa23.89■■□□□ 1.41
TUBA4A-203ENST00000398989 CUL7Q14999 1698 aa23.86■■□□□ 1.41
TUBA4A-203ENST00000398989 NUP160Q12769 1436 aa23.85■■□□□ 1.41
TUBA4A-203ENST00000398989 IGF1RP08069 1367 aa23.85■■□□□ 1.41
TUBA4A-203ENST00000398989 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
TUBA4A-203ENST00000398989 CYB5RLQ6IPT4 315 aa23.78■■□□□ 1.4
TUBA4A-203ENST00000398989 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
TUBA4A-203ENST00000398989 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
TUBA4A-203ENST00000398989 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
TUBA4A-203ENST00000398989 ERCC6L2Q5T890 1561 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms