RNA–Protein interactions for RNA: ENST00000398812.6

GRB10-204, Transcript of growth factor receptor bound protein 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRB10, Length 4,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRB10-204ENST00000398812 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
GRB10-204ENST00000398812 DCAF8L2P0C7V8 631 aa16.69■□□□□ 0.26
GRB10-204ENST00000398812 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
GRB10-204ENST00000398812 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
GRB10-204ENST00000398812 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
GRB10-204ENST00000398812 APLP2Q06481 763 aa14.84□□□□□ -0.03
GRB10-204ENST00000398812 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
GRB10-204ENST00000398812 FAM9AQ8IZU1 332 aaPredicted RBP14.76□□□□□ -0.05
GRB10-204ENST00000398812 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
GRB10-204ENST00000398812 ABCC9O60706 1549 aa14.58□□□□□ -0.08
GRB10-204ENST00000398812 UBTFP17480 764 aaKnown RBP14.47□□□□□ -0.09
GRB10-204ENST00000398812 RANGAP1P46060 587 aaPredicted RBP14.38□□□□□ -0.11
GRB10-204ENST00000398812 PCGF6Q9BYE7 350 aa14.37□□□□□ -0.11
GRB10-204ENST00000398812 MYT1Q01538 1121 aa14.33□□□□□ -0.12
GRB10-204ENST00000398812 TTBK1Q5TCY1 1321 aaPredicted RBP14.33□□□□□ -0.12
GRB10-204ENST00000398812 ATP1B4Q9UN42 357 aaPredicted RBP14.3□□□□□ -0.12
GRB10-204ENST00000398812 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
GRB10-204ENST00000398812 CCDC180Q9P1Z9 1646 aa14.29□□□□□ -0.12
GRB10-204ENST00000398812 ZEB1P37275 1124 aaPredicted RBP14.29□□□□□ -0.12
GRB10-204ENST00000398812 CHIC1Q5VXU3 224 aa14.29□□□□□ -0.12
GRB10-204ENST00000398812 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
GRB10-204ENST00000398812 CENPBP07199 599 aaPredicted RBP14.2□□□□□ -0.14
GRB10-204ENST00000398812 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
GRB10-204ENST00000398812 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
GRB10-204ENST00000398812 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
GRB10-204ENST00000398812 LOC105371045A0A1W2PR82 267 aa14.03□□□□□ -0.16
GRB10-204ENST00000398812 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
GRB10-204ENST00000398812 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
GRB10-204ENST00000398812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
GRB10-204ENST00000398812 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
GRB10-204ENST00000398812 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
GRB10-204ENST00000398812 NACADO15069 1562 aa13.84□□□□□ -0.19
GRB10-204ENST00000398812 ITGAEP38570 1179 aa13.79□□□□□ -0.2
GRB10-204ENST00000398812 NEFLP07196 543 aa13.76□□□□□ -0.21
GRB10-204ENST00000398812 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
GRB10-204ENST00000398812 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
GRB10-204ENST00000398812 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
GRB10-204ENST00000398812 HRCP23327 699 aa13.7□□□□□ -0.22
GRB10-204ENST00000398812 FBLN2P98095 1184 aa13.62□□□□□ -0.23
GRB10-204ENST00000398812 FAM50AQ14320 339 aaKnown RBP13.61□□□□□ -0.23
GRB10-204ENST00000398812 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
GRB10-204ENST00000398812 YTHDC1Q96MU7 727 aaKnown RBP13.58□□□□□ -0.24
GRB10-204ENST00000398812 CDK11AQ9UQ88 783 aaPredicted RBP13.49□□□□□ -0.25
GRB10-204ENST00000398812 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
GRB10-204ENST00000398812 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
GRB10-204ENST00000398812 BAZ1BQ9UIG0 1483 aaKnown RBP13.46□□□□□ -0.25
GRB10-204ENST00000398812 P3H3Q8IVL6 736 aa13.46□□□□□ -0.26
GRB10-204ENST00000398812 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
GRB10-204ENST00000398812 POLR3GLQ9BT43 218 aa13.43□□□□□ -0.26
GRB10-204ENST00000398812 EEA1Q15075 1411 aa13.42□□□□□ -0.26
GRB10-204ENST00000398812 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
GRB10-204ENST00000398812 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
GRB10-204ENST00000398812 CECR2Q9BXF3 1484 aa13.33□□□□□ -0.28
GRB10-204ENST00000398812 NEUROD1Q13562 356 aa13.33□□□□□ -0.28
GRB10-204ENST00000398812 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
GRB10-204ENST00000398812 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
GRB10-204ENST00000398812 CHMP7Q8WUX9 453 aaPredicted RBP13.28□□□□□ -0.28
GRB10-204ENST00000398812 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
GRB10-204ENST00000398812 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
GRB10-204ENST00000398812 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
GRB10-204ENST00000398812 CLIP1P30622 1438 aa13.25□□□□□ -0.29
GRB10-204ENST00000398812 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
GRB10-204ENST00000398812 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
GRB10-204ENST00000398812 SMARCA2P51531 1590 aa13.21□□□□□ -0.29
GRB10-204ENST00000398812 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
GRB10-204ENST00000398812 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
GRB10-204ENST00000398812 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
GRB10-204ENST00000398812 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
GRB10-204ENST00000398812 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
GRB10-204ENST00000398812 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
GRB10-204ENST00000398812 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
GRB10-204ENST00000398812 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
GRB10-204ENST00000398812 ANP32CO43423 234 aa13.15□□□□□ -0.3
GRB10-204ENST00000398812 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
GRB10-204ENST00000398812 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
GRB10-204ENST00000398812 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
GRB10-204ENST00000398812 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
GRB10-204ENST00000398812 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
GRB10-204ENST00000398812 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
GRB10-204ENST00000398812 TONSLQ96HA7 1378 aa13.08□□□□□ -0.31
GRB10-204ENST00000398812 ESF1Q9H501 851 aaKnown RBP13.08□□□□□ -0.32
GRB10-204ENST00000398812 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
GRB10-204ENST00000398812 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
GRB10-204ENST00000398812 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
GRB10-204ENST00000398812 GTF3C3Q9Y5Q9 886 aa13.03□□□□□ -0.32
GRB10-204ENST00000398812 CHIC2Q9UKJ5 165 aa13.03□□□□□ -0.32
GRB10-204ENST00000398812 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.32
GRB10-204ENST00000398812 CUX2O14529 1486 aa13.02□□□□□ -0.33
GRB10-204ENST00000398812 BCANQ96GW7 911 aa13□□□□□ -0.33
GRB10-204ENST00000398812 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
GRB10-204ENST00000398812 CADPSQ9ULU8 1353 aa12.98□□□□□ -0.33
GRB10-204ENST00000398812 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
GRB10-204ENST00000398812 SOGA1O94964 1423 aa12.97□□□□□ -0.33
GRB10-204ENST00000398812 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.34
GRB10-204ENST00000398812 WIZO95785 1651 aa12.95□□□□□ -0.34
GRB10-204ENST00000398812 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
GRB10-204ENST00000398812 CHGAP10645 457 aaKnown RBP12.94□□□□□ -0.34
GRB10-204ENST00000398812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
GRB10-204ENST00000398812 NEFMP07197 916 aa12.93□□□□□ -0.34
GRB10-204ENST00000398812 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms