RNA–Protein interactions for RNA: ENST00000398554.1

AC087491.1-201, humanhuman

TSL 3 BASIC

Gene AC087491.1, Length 616 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087491.1-201ENST00000398554 NISCHQ9Y2I1 1504 aa24.09■■□□□ 1.45
AC087491.1-201ENST00000398554 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
AC087491.1-201ENST00000398554 ABCC9O60706 1549 aa20.68■□□□□ 0.9
AC087491.1-201ENST00000398554 ZCCHC6Q5VYS8 1495 aaKnown RBP20.17■□□□□ 0.82
AC087491.1-201ENST00000398554 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
AC087491.1-201ENST00000398554 NACADO15069 1562 aa19.92■□□□□ 0.78
AC087491.1-201ENST00000398554 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
AC087491.1-201ENST00000398554 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
AC087491.1-201ENST00000398554 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
AC087491.1-201ENST00000398554 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
AC087491.1-201ENST00000398554 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
AC087491.1-201ENST00000398554 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
AC087491.1-201ENST00000398554 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
AC087491.1-201ENST00000398554 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC087491.1-201ENST00000398554 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
AC087491.1-201ENST00000398554 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
AC087491.1-201ENST00000398554 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
AC087491.1-201ENST00000398554 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
AC087491.1-201ENST00000398554 BAZ1AQ9NRL2 1556 aaPredicted RBP18.66■□□□□ 0.58
AC087491.1-201ENST00000398554 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.58
AC087491.1-201ENST00000398554 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
AC087491.1-201ENST00000398554 WIZO95785 1651 aa18.51■□□□□ 0.55
AC087491.1-201ENST00000398554 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.55
AC087491.1-201ENST00000398554 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.54
AC087491.1-201ENST00000398554 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
AC087491.1-201ENST00000398554 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
AC087491.1-201ENST00000398554 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
AC087491.1-201ENST00000398554 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
AC087491.1-201ENST00000398554 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
AC087491.1-201ENST00000398554 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
AC087491.1-201ENST00000398554 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
AC087491.1-201ENST00000398554 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
AC087491.1-201ENST00000398554 NESP48681 1621 aa17.99■□□□□ 0.47
AC087491.1-201ENST00000398554 LAMC3Q9Y6N6 1575 aa17.88■□□□□ 0.45
AC087491.1-201ENST00000398554 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
AC087491.1-201ENST00000398554 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
AC087491.1-201ENST00000398554 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
AC087491.1-201ENST00000398554 CFTRP13569 1480 aa17.8■□□□□ 0.44
AC087491.1-201ENST00000398554 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
AC087491.1-201ENST00000398554 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
AC087491.1-201ENST00000398554 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
AC087491.1-201ENST00000398554 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
AC087491.1-201ENST00000398554 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
AC087491.1-201ENST00000398554 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
AC087491.1-201ENST00000398554 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
AC087491.1-201ENST00000398554 URB2Q14146 1524 aaKnown RBP17.55■□□□□ 0.4
AC087491.1-201ENST00000398554 WDR62O43379 1518 aa17.52■□□□□ 0.39
AC087491.1-201ENST00000398554 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
AC087491.1-201ENST00000398554 CUX1P39880 1505 aa17.48■□□□□ 0.39
AC087491.1-201ENST00000398554 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
AC087491.1-201ENST00000398554 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
AC087491.1-201ENST00000398554 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
AC087491.1-201ENST00000398554 BIVM-ERCC5R4GMW8 1640 aa17.4■□□□□ 0.38
AC087491.1-201ENST00000398554 CUX2O14529 1486 aa17.38■□□□□ 0.37
AC087491.1-201ENST00000398554 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
AC087491.1-201ENST00000398554 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
AC087491.1-201ENST00000398554 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
AC087491.1-201ENST00000398554 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
AC087491.1-201ENST00000398554 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
AC087491.1-201ENST00000398554 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
AC087491.1-201ENST00000398554 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
AC087491.1-201ENST00000398554 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
AC087491.1-201ENST00000398554 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
AC087491.1-201ENST00000398554 SOGA1O94964 1423 aa17.21■□□□□ 0.35
AC087491.1-201ENST00000398554 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
AC087491.1-201ENST00000398554 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
AC087491.1-201ENST00000398554 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
AC087491.1-201ENST00000398554 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
AC087491.1-201ENST00000398554 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
AC087491.1-201ENST00000398554 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
AC087491.1-201ENST00000398554 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.33
AC087491.1-201ENST00000398554 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
AC087491.1-201ENST00000398554 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
AC087491.1-201ENST00000398554 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
AC087491.1-201ENST00000398554 CHD1O14646 1710 aa17■□□□□ 0.31
AC087491.1-201ENST00000398554 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
AC087491.1-201ENST00000398554 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
AC087491.1-201ENST00000398554 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
AC087491.1-201ENST00000398554 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
AC087491.1-201ENST00000398554 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
AC087491.1-201ENST00000398554 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
AC087491.1-201ENST00000398554 CUL7Q14999 1698 aa16.91■□□□□ 0.3
AC087491.1-201ENST00000398554 FBLN2P98095 1184 aa16.86■□□□□ 0.29
AC087491.1-201ENST00000398554 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
AC087491.1-201ENST00000398554 IGF1RP08069 1367 aa16.84■□□□□ 0.29
AC087491.1-201ENST00000398554 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
AC087491.1-201ENST00000398554 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
AC087491.1-201ENST00000398554 EEA1Q15075 1411 aa16.8■□□□□ 0.28
AC087491.1-201ENST00000398554 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
AC087491.1-201ENST00000398554 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
AC087491.1-201ENST00000398554 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
AC087491.1-201ENST00000398554 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
AC087491.1-201ENST00000398554 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
AC087491.1-201ENST00000398554 KIF21BO75037 1637 aa16.74■□□□□ 0.27
AC087491.1-201ENST00000398554 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
AC087491.1-201ENST00000398554 RAPGEF2Q9Y4G8 1499 aa16.73■□□□□ 0.27
AC087491.1-201ENST00000398554 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
AC087491.1-201ENST00000398554 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
AC087491.1-201ENST00000398554 NUP160Q12769 1436 aa16.69■□□□□ 0.26
AC087491.1-201ENST00000398554 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms