RNA–Protein interactions for RNA: ENST00000398122.7

PDPR-202, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

TSL 2 BASIC

Gene PDPR, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-202ENST00000398122 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
PDPR-202ENST00000398122 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
PDPR-202ENST00000398122 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
PDPR-202ENST00000398122 HRCP23327 699 aa24.67■■□□□ 1.54
PDPR-202ENST00000398122 MYO15BQ96JP2 1530 aa24.32■■□□□ 1.48
PDPR-202ENST00000398122 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
PDPR-202ENST00000398122 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
PDPR-202ENST00000398122 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
PDPR-202ENST00000398122 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
PDPR-202ENST00000398122 DCAF1Q9Y4B6 1507 aa23.78■■□□□ 1.4
PDPR-202ENST00000398122 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
PDPR-202ENST00000398122 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
PDPR-202ENST00000398122 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
PDPR-202ENST00000398122 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
PDPR-202ENST00000398122 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
PDPR-202ENST00000398122 ZEB1P37275 1124 aaPredicted RBP23.31■■□□□ 1.32
PDPR-202ENST00000398122 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
PDPR-202ENST00000398122 TRIM41Q8WV44 630 aa22.88■■□□□ 1.25
PDPR-202ENST00000398122 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.24
PDPR-202ENST00000398122 ABCC9O60706 1549 aa22.78■■□□□ 1.24
PDPR-202ENST00000398122 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
PDPR-202ENST00000398122 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
PDPR-202ENST00000398122 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
PDPR-202ENST00000398122 NEUROD1Q13562 356 aa22.66■■□□□ 1.22
PDPR-202ENST00000398122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.56■■□□□ 1.2
PDPR-202ENST00000398122 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
PDPR-202ENST00000398122 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
PDPR-202ENST00000398122 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
PDPR-202ENST00000398122 MYT1Q01538 1121 aa22.48■■□□□ 1.19
PDPR-202ENST00000398122 CENPBP07199 599 aaPredicted RBP22.46■■□□□ 1.19
PDPR-202ENST00000398122 DIEXFQ68CQ4 756 aaKnown RBP22.45■■□□□ 1.18
PDPR-202ENST00000398122 SCRIBQ14160 1630 aa22.41■■□□□ 1.18
PDPR-202ENST00000398122 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
PDPR-202ENST00000398122 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
PDPR-202ENST00000398122 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
PDPR-202ENST00000398122 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
PDPR-202ENST00000398122 YTHDC1Q96MU7 727 aaKnown RBP22.04■■□□□ 1.12
PDPR-202ENST00000398122 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
PDPR-202ENST00000398122 WIZO95785 1651 aa21.97■■□□□ 1.11
PDPR-202ENST00000398122 CEP162Q5TB80 1403 aa21.92■■□□□ 1.1
PDPR-202ENST00000398122 MIER1Q8N108 512 aa21.89■■□□□ 1.1
PDPR-202ENST00000398122 EIF4G1Q04637 1599 aaKnown RBP21.88■■□□□ 1.09
PDPR-202ENST00000398122 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
PDPR-202ENST00000398122 BAZ1AQ9NRL2 1556 aaPredicted RBP21.81■■□□□ 1.08
PDPR-202ENST00000398122 TNIKQ9UKE5 1360 aa21.81■■□□□ 1.08
PDPR-202ENST00000398122 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
PDPR-202ENST00000398122 SOGA1O94964 1423 aa21.74■■□□□ 1.07
PDPR-202ENST00000398122 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
PDPR-202ENST00000398122 NACADO15069 1562 aa21.7■■□□□ 1.06
PDPR-202ENST00000398122 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
PDPR-202ENST00000398122 CSRNP3Q8WYN3 585 aa21.68■■□□□ 1.06
PDPR-202ENST00000398122 EEA1Q15075 1411 aa21.61■■□□□ 1.05
PDPR-202ENST00000398122 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
PDPR-202ENST00000398122 TOP2AP11388 1531 aaKnown RBP21.57■■□□□ 1.04
PDPR-202ENST00000398122 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
PDPR-202ENST00000398122 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
PDPR-202ENST00000398122 SUPT16HQ9Y5B9 1047 aaKnown RBP21.48■■□□□ 1.03
PDPR-202ENST00000398122 CLSPNQ9HAW4 1339 aa21.47■■□□□ 1.03
PDPR-202ENST00000398122 CLIP1P30622 1438 aa21.38■■□□□ 1.01
PDPR-202ENST00000398122 APLP2Q06481 763 aa21.37■■□□□ 1.01
PDPR-202ENST00000398122 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
PDPR-202ENST00000398122 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
PDPR-202ENST00000398122 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
PDPR-202ENST00000398122 TSHZ2Q9NRE2 1034 aa21.33■■□□□ 1.01
PDPR-202ENST00000398122 ANP32EQ9BTT0 268 aa21.28■■□□□ 1
PDPR-202ENST00000398122 KIF21BO75037 1637 aa21.26■□□□□ 0.99
PDPR-202ENST00000398122 DHX57Q6P158 1386 aaKnown RBP21.25■□□□□ 0.99
PDPR-202ENST00000398122 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
PDPR-202ENST00000398122 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
PDPR-202ENST00000398122 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
PDPR-202ENST00000398122 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
PDPR-202ENST00000398122 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
PDPR-202ENST00000398122 BCL11AQ9H165 835 aa21.06■□□□□ 0.96
PDPR-202ENST00000398122 BCANQ96GW7 911 aa21.05■□□□□ 0.96
PDPR-202ENST00000398122 KANK4Q5T7N3 995 aaPredicted RBP21.02■□□□□ 0.96
PDPR-202ENST00000398122 FKBP8Q14318 412 aa20.98■□□□□ 0.95
PDPR-202ENST00000398122 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
PDPR-202ENST00000398122 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
PDPR-202ENST00000398122 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
PDPR-202ENST00000398122 CUX2O14529 1486 aa20.89■□□□□ 0.93
PDPR-202ENST00000398122 ITGAEP38570 1179 aa20.87■□□□□ 0.93
PDPR-202ENST00000398122 RBM19Q9Y4C8 960 aaKnown RBP20.86■□□□□ 0.93
PDPR-202ENST00000398122 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
PDPR-202ENST00000398122 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
PDPR-202ENST00000398122 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
PDPR-202ENST00000398122 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
PDPR-202ENST00000398122 NEFLP07196 543 aa20.82■□□□□ 0.92
PDPR-202ENST00000398122 PRXQ9BXM0 1461 aa20.8■□□□□ 0.92
PDPR-202ENST00000398122 ERICH3Q5RHP9 1530 aa20.8■□□□□ 0.92
PDPR-202ENST00000398122 RAB3GAP2Q9H2M9 1393 aa20.78■□□□□ 0.92
PDPR-202ENST00000398122 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
PDPR-202ENST00000398122 MAPKBP1O60336 1514 aa20.76■□□□□ 0.91
PDPR-202ENST00000398122 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
PDPR-202ENST00000398122 TRIM52Q96A61 297 aa20.71■□□□□ 0.91
PDPR-202ENST00000398122 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
PDPR-202ENST00000398122 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
PDPR-202ENST00000398122 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
PDPR-202ENST00000398122 BICRAQ9NZM4 1560 aa20.67■□□□□ 0.9
PDPR-202ENST00000398122 CCER2I3L3R5 266 aa20.66■□□□□ 0.9
PDPR-202ENST00000398122 SETD5Q9C0A6 1442 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms