RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 NISCHQ9Y2I1 1504 aa35.68■■■■□ 3.3
SNRNP25-203ENST00000397876 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
SNRNP25-203ENST00000397876 ABCC9O60706 1549 aa31.9■■■□□ 2.7
SNRNP25-203ENST00000397876 RB1CC1Q8TDY2 1594 aa30.44■■■□□ 2.46
SNRNP25-203ENST00000397876 NACADO15069 1562 aa30.24■■■□□ 2.43
SNRNP25-203ENST00000397876 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
SNRNP25-203ENST00000397876 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
SNRNP25-203ENST00000397876 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
SNRNP25-203ENST00000397876 UNC13AQ9UPW8 1703 aa29.71■■■□□ 2.35
SNRNP25-203ENST00000397876 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
SNRNP25-203ENST00000397876 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
SNRNP25-203ENST00000397876 BICRAQ9NZM4 1560 aa29.51■■■□□ 2.31
SNRNP25-203ENST00000397876 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
SNRNP25-203ENST00000397876 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.26
SNRNP25-203ENST00000397876 SCRIBQ14160 1630 aa29.17■■■□□ 2.26
SNRNP25-203ENST00000397876 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
SNRNP25-203ENST00000397876 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
SNRNP25-203ENST00000397876 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
SNRNP25-203ENST00000397876 NCAPD3P42695 1498 aa27.89■■■□□ 2.05
SNRNP25-203ENST00000397876 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
SNRNP25-203ENST00000397876 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
SNRNP25-203ENST00000397876 SMARCA2P51531 1590 aa27.79■■■□□ 2.04
SNRNP25-203ENST00000397876 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
SNRNP25-203ENST00000397876 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
SNRNP25-203ENST00000397876 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
SNRNP25-203ENST00000397876 ERCC6Q03468 1493 aa27.57■■■□□ 2
SNRNP25-203ENST00000397876 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
SNRNP25-203ENST00000397876 CUX2O14529 1486 aa27.49■■□□□ 1.99
SNRNP25-203ENST00000397876 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
SNRNP25-203ENST00000397876 NESP48681 1621 aa27.41■■□□□ 1.98
SNRNP25-203ENST00000397876 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
SNRNP25-203ENST00000397876 LAMC3Q9Y6N6 1575 aa27.28■■□□□ 1.96
SNRNP25-203ENST00000397876 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
SNRNP25-203ENST00000397876 WIZO95785 1651 aa27.16■■□□□ 1.94
SNRNP25-203ENST00000397876 PDS5BQ9NTI5 1447 aa27.11■■□□□ 1.93
SNRNP25-203ENST00000397876 KIF21AQ7Z4S6 1674 aa27.09■■□□□ 1.93
SNRNP25-203ENST00000397876 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
SNRNP25-203ENST00000397876 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
SNRNP25-203ENST00000397876 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
SNRNP25-203ENST00000397876 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
SNRNP25-203ENST00000397876 WDR62O43379 1518 aa26.81■■□□□ 1.88
SNRNP25-203ENST00000397876 CEP164Q9UPV0 1460 aa26.8■■□□□ 1.88
SNRNP25-203ENST00000397876 CFTRP13569 1480 aa26.76■■□□□ 1.87
SNRNP25-203ENST00000397876 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
SNRNP25-203ENST00000397876 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
SNRNP25-203ENST00000397876 URB2Q14146 1524 aaKnown RBP26.52■■□□□ 1.84
SNRNP25-203ENST00000397876 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
SNRNP25-203ENST00000397876 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
SNRNP25-203ENST00000397876 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
SNRNP25-203ENST00000397876 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
SNRNP25-203ENST00000397876 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
SNRNP25-203ENST00000397876 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
SNRNP25-203ENST00000397876 ZNF608Q9ULD9 1512 aaPredicted RBP26.16■■□□□ 1.78
SNRNP25-203ENST00000397876 TRIM41Q8WV44 630 aa26.16■■□□□ 1.78
SNRNP25-203ENST00000397876 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
SNRNP25-203ENST00000397876 TARBP1Q13395 1621 aaKnown RBP26.01■■□□□ 1.75
SNRNP25-203ENST00000397876 POLA1P09884 1462 aaPredicted RBP25.99■■□□□ 1.75
SNRNP25-203ENST00000397876 AQRO60306 1485 aaKnown RBP eCLIP25.92■■□□□ 1.741e-7■■■■■ 49.5
SNRNP25-203ENST00000397876 RIMBP3CA6NJZ7 1639 aa25.88■■□□□ 1.73
SNRNP25-203ENST00000397876 RIMBP3BA6NNM3 1639 aa25.88■■□□□ 1.73
SNRNP25-203ENST00000397876 RIMBP3Q9UFD9 1639 aa25.88■■□□□ 1.73
SNRNP25-203ENST00000397876 RAD54L2Q9Y4B4 1467 aa25.87■■□□□ 1.73
SNRNP25-203ENST00000397876 SOGA1O94964 1423 aa25.86■■□□□ 1.73
SNRNP25-203ENST00000397876 CHD1O14646 1710 aa25.85■■□□□ 1.73
SNRNP25-203ENST00000397876 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
SNRNP25-203ENST00000397876 CUX1P39880 1505 aa25.83■■□□□ 1.72
SNRNP25-203ENST00000397876 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
SNRNP25-203ENST00000397876 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
SNRNP25-203ENST00000397876 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
SNRNP25-203ENST00000397876 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
SNRNP25-203ENST00000397876 FBLN2P98095 1184 aa25.75■■□□□ 1.71
SNRNP25-203ENST00000397876 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
SNRNP25-203ENST00000397876 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
SNRNP25-203ENST00000397876 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
SNRNP25-203ENST00000397876 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
SNRNP25-203ENST00000397876 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
SNRNP25-203ENST00000397876 SYNJ1O43426 1573 aa25.57■■□□□ 1.68
SNRNP25-203ENST00000397876 CYB5RLQ6IPT4 315 aa25.57■■□□□ 1.68
SNRNP25-203ENST00000397876 SYNJ2O15056 1496 aa25.57■■□□□ 1.68
SNRNP25-203ENST00000397876 GAPVD1Q14C86 1478 aa25.57■■□□□ 1.68
SNRNP25-203ENST00000397876 ABCA10Q8WWZ4 1543 aa25.56■■□□□ 1.68
SNRNP25-203ENST00000397876 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
SNRNP25-203ENST00000397876 CLASP1Q7Z460 1538 aa25.55■■□□□ 1.68
SNRNP25-203ENST00000397876 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
SNRNP25-203ENST00000397876 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
SNRNP25-203ENST00000397876 BIVM-ERCC5R4GMW8 1640 aa25.47■■□□□ 1.67
SNRNP25-203ENST00000397876 TOP2BQ02880 1626 aa25.46■■□□□ 1.67
SNRNP25-203ENST00000397876 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
SNRNP25-203ENST00000397876 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
SNRNP25-203ENST00000397876 TRHP20396 242 aaPredicted RBP25.28■■□□□ 1.64
SNRNP25-203ENST00000397876 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
SNRNP25-203ENST00000397876 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
SNRNP25-203ENST00000397876 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
SNRNP25-203ENST00000397876 NUP160Q12769 1436 aa25.22■■□□□ 1.63
SNRNP25-203ENST00000397876 ERCC6L2Q5T890 1561 aa25.13■■□□□ 1.61
SNRNP25-203ENST00000397876 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
SNRNP25-203ENST00000397876 RUSC2Q8N2Y8 1516 aa24.98■■□□□ 1.59
SNRNP25-203ENST00000397876 PRG4Q92954 1404 aaPredicted RBP24.97■■□□□ 1.59
SNRNP25-203ENST00000397876 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
SNRNP25-203ENST00000397876 JPH4Q96JJ6 628 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms