RNA–Protein interactions for RNA: ENST00000396553.6

AMPD3-202, Transcript of adenosine monophosphate deaminase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMPD3, Length 3,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPD3-202ENST00000396553 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
AMPD3-202ENST00000396553 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
AMPD3-202ENST00000396553 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
AMPD3-202ENST00000396553 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
AMPD3-202ENST00000396553 ABCC9O60706 1549 aa14.37□□□□□ -0.11
AMPD3-202ENST00000396553 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
AMPD3-202ENST00000396553 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
AMPD3-202ENST00000396553 HRCP23327 699 aa14.02□□□□□ -0.16
AMPD3-202ENST00000396553 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
AMPD3-202ENST00000396553 MYO15BQ96JP2 1530 aa13.84□□□□□ -0.19
AMPD3-202ENST00000396553 SCRIBQ14160 1630 aa13.8□□□□□ -0.2
AMPD3-202ENST00000396553 MYT1Q01538 1121 aa13.75□□□□□ -0.21
AMPD3-202ENST00000396553 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
AMPD3-202ENST00000396553 DCAF1Q9Y4B6 1507 aa13.7□□□□□ -0.22
AMPD3-202ENST00000396553 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
AMPD3-202ENST00000396553 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
AMPD3-202ENST00000396553 NACADO15069 1562 aa13.58□□□□□ -0.24
AMPD3-202ENST00000396553 PCGF6Q9BYE7 350 aa13.51□□□□□ -0.25
AMPD3-202ENST00000396553 CECR2Q9BXF3 1484 aa13.46□□□□□ -0.26
AMPD3-202ENST00000396553 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
AMPD3-202ENST00000396553 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
AMPD3-202ENST00000396553 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
AMPD3-202ENST00000396553 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
AMPD3-202ENST00000396553 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
AMPD3-202ENST00000396553 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
AMPD3-202ENST00000396553 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
AMPD3-202ENST00000396553 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
AMPD3-202ENST00000396553 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
AMPD3-202ENST00000396553 WIZO95785 1651 aa13.16□□□□□ -0.3
AMPD3-202ENST00000396553 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
AMPD3-202ENST00000396553 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
AMPD3-202ENST00000396553 TRIM26Q12899 539 aaPredicted RBP13.08□□□□□ -0.32
AMPD3-202ENST00000396553 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
AMPD3-202ENST00000396553 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
AMPD3-202ENST00000396553 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
AMPD3-202ENST00000396553 TTBK1Q5TCY1 1321 aaPredicted RBP12.94□□□□□ -0.34
AMPD3-202ENST00000396553 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
AMPD3-202ENST00000396553 CCDC88BA6NC98 1476 aa12.92□□□□□ -0.34
AMPD3-202ENST00000396553 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
AMPD3-202ENST00000396553 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
AMPD3-202ENST00000396553 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
AMPD3-202ENST00000396553 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
AMPD3-202ENST00000396553 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
AMPD3-202ENST00000396553 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
AMPD3-202ENST00000396553 ABCC8Q09428 1581 aa12.83□□□□□ -0.36
AMPD3-202ENST00000396553 SMARCA2P51531 1590 aa12.79□□□□□ -0.36
AMPD3-202ENST00000396553 RANGAP1P46060 587 aaPredicted RBP12.78□□□□□ -0.36
AMPD3-202ENST00000396553 GTF3C3Q9Y5Q9 886 aa12.76□□□□□ -0.37
AMPD3-202ENST00000396553 SOGA1O94964 1423 aa12.66□□□□□ -0.38
AMPD3-202ENST00000396553 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
AMPD3-202ENST00000396553 RUSC2Q8N2Y8 1516 aa12.63□□□□□ -0.39
AMPD3-202ENST00000396553 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
AMPD3-202ENST00000396553 ERICH6Q7L0X2 663 aa12.6□□□□□ -0.39
AMPD3-202ENST00000396553 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
AMPD3-202ENST00000396553 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
AMPD3-202ENST00000396553 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
AMPD3-202ENST00000396553 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
AMPD3-202ENST00000396553 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
AMPD3-202ENST00000396553 DIEXFQ68CQ4 756 aaKnown RBP12.52□□□□□ -0.4
AMPD3-202ENST00000396553 NESP48681 1621 aa12.5□□□□□ -0.41
AMPD3-202ENST00000396553 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
AMPD3-202ENST00000396553 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
AMPD3-202ENST00000396553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
AMPD3-202ENST00000396553 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
AMPD3-202ENST00000396553 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
AMPD3-202ENST00000396553 CFTRP13569 1480 aa12.4□□□□□ -0.42
AMPD3-202ENST00000396553 CUX1P39880 1505 aa12.36□□□□□ -0.43
AMPD3-202ENST00000396553 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.43
AMPD3-202ENST00000396553 CEP162Q5TB80 1403 aa12.33□□□□□ -0.44
AMPD3-202ENST00000396553 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
AMPD3-202ENST00000396553 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
AMPD3-202ENST00000396553 CCER1Q8TC90 406 aaPredicted RBP12.32□□□□□ -0.44
AMPD3-202ENST00000396553 CUX2O14529 1486 aa12.3□□□□□ -0.44
AMPD3-202ENST00000396553 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
AMPD3-202ENST00000396553 MIER1Q8N108 512 aa12.29□□□□□ -0.44
AMPD3-202ENST00000396553 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
AMPD3-202ENST00000396553 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
AMPD3-202ENST00000396553 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
AMPD3-202ENST00000396553 GOLGA3Q08378 1498 aa12.27□□□□□ -0.45
AMPD3-202ENST00000396553 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
AMPD3-202ENST00000396553 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
AMPD3-202ENST00000396553 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
AMPD3-202ENST00000396553 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
AMPD3-202ENST00000396553 EEA1Q15075 1411 aa12.25□□□□□ -0.45
AMPD3-202ENST00000396553 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
AMPD3-202ENST00000396553 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
AMPD3-202ENST00000396553 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
AMPD3-202ENST00000396553 ANP32EQ9BTT0 268 aa12.22□□□□□ -0.45
AMPD3-202ENST00000396553 CLIP1P30622 1438 aa12.22□□□□□ -0.45
AMPD3-202ENST00000396553 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
AMPD3-202ENST00000396553 APLP2Q06481 763 aa12.21□□□□□ -0.45
AMPD3-202ENST00000396553 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
AMPD3-202ENST00000396553 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.46
AMPD3-202ENST00000396553 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
AMPD3-202ENST00000396553 IGF1RP08069 1367 aa12.18□□□□□ -0.46
AMPD3-202ENST00000396553 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
AMPD3-202ENST00000396553 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
AMPD3-202ENST00000396553 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
AMPD3-202ENST00000396553 CARMIL1Q5VZK9 1371 aa12.16□□□□□ -0.46
AMPD3-202ENST00000396553 FBLN2P98095 1184 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms