RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
CCHCR1-203ENST00000396268 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
CCHCR1-203ENST00000396268 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
CCHCR1-203ENST00000396268 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
CCHCR1-203ENST00000396268 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
CCHCR1-203ENST00000396268 ABCC9O60706 1549 aa24.56■■□□□ 1.52
CCHCR1-203ENST00000396268 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
CCHCR1-203ENST00000396268 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
CCHCR1-203ENST00000396268 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
CCHCR1-203ENST00000396268 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
CCHCR1-203ENST00000396268 NACADO15069 1562 aa23.92■■□□□ 1.42
CCHCR1-203ENST00000396268 RB1CC1Q8TDY2 1594 aa23.72■■□□□ 1.39
CCHCR1-203ENST00000396268 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
CCHCR1-203ENST00000396268 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
CCHCR1-203ENST00000396268 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
CCHCR1-203ENST00000396268 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
CCHCR1-203ENST00000396268 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
CCHCR1-203ENST00000396268 HRCP23327 699 aa23.19■■□□□ 1.3
CCHCR1-203ENST00000396268 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
CCHCR1-203ENST00000396268 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
CCHCR1-203ENST00000396268 PCGF6Q9BYE7 350 aa23.1■■□□□ 1.29
CCHCR1-203ENST00000396268 PPARGC1BQ86YN6 1023 aaKnown RBP23.09■■□□□ 1.29
CCHCR1-203ENST00000396268 WIZO95785 1651 aa22.95■■□□□ 1.26
CCHCR1-203ENST00000396268 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
CCHCR1-203ENST00000396268 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
CCHCR1-203ENST00000396268 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.25
CCHCR1-203ENST00000396268 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
CCHCR1-203ENST00000396268 ATAD2BQ9ULI0 1458 aa22.46■■□□□ 1.19
CCHCR1-203ENST00000396268 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
CCHCR1-203ENST00000396268 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
CCHCR1-203ENST00000396268 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
CCHCR1-203ENST00000396268 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
CCHCR1-203ENST00000396268 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
CCHCR1-203ENST00000396268 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
CCHCR1-203ENST00000396268 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
CCHCR1-203ENST00000396268 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.16
CCHCR1-203ENST00000396268 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
CCHCR1-203ENST00000396268 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
CCHCR1-203ENST00000396268 ABCC8Q09428 1581 aa22.14■■□□□ 1.14
CCHCR1-203ENST00000396268 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
CCHCR1-203ENST00000396268 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
CCHCR1-203ENST00000396268 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
CCHCR1-203ENST00000396268 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
CCHCR1-203ENST00000396268 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
CCHCR1-203ENST00000396268 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
CCHCR1-203ENST00000396268 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
CCHCR1-203ENST00000396268 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
CCHCR1-203ENST00000396268 SOGA1O94964 1423 aa21.76■■□□□ 1.07
CCHCR1-203ENST00000396268 CFTRP13569 1480 aa21.75■■□□□ 1.07
CCHCR1-203ENST00000396268 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
CCHCR1-203ENST00000396268 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
CCHCR1-203ENST00000396268 NESP48681 1621 aa21.65■■□□□ 1.06
CCHCR1-203ENST00000396268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
CCHCR1-203ENST00000396268 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
CCHCR1-203ENST00000396268 CUX1P39880 1505 aa21.57■■□□□ 1.04
CCHCR1-203ENST00000396268 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
CCHCR1-203ENST00000396268 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
CCHCR1-203ENST00000396268 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
CCHCR1-203ENST00000396268 PRDM2Q13029 1718 aa21.5■■□□□ 1.03
CCHCR1-203ENST00000396268 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
CCHCR1-203ENST00000396268 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
CCHCR1-203ENST00000396268 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
CCHCR1-203ENST00000396268 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
CCHCR1-203ENST00000396268 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
CCHCR1-203ENST00000396268 EEA1Q15075 1411 aa21.37■■□□□ 1.01
CCHCR1-203ENST00000396268 CEP162Q5TB80 1403 aa21.34■■□□□ 1.01
CCHCR1-203ENST00000396268 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
CCHCR1-203ENST00000396268 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
CCHCR1-203ENST00000396268 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
CCHCR1-203ENST00000396268 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
CCHCR1-203ENST00000396268 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
CCHCR1-203ENST00000396268 TNIKQ9UKE5 1360 aa21.25■□□□□ 0.99
CCHCR1-203ENST00000396268 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
CCHCR1-203ENST00000396268 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
CCHCR1-203ENST00000396268 GOLGA3Q08378 1498 aa21.23■□□□□ 0.99
CCHCR1-203ENST00000396268 RAD54L2Q9Y4B4 1467 aa21.23■□□□□ 0.99
CCHCR1-203ENST00000396268 URB2Q14146 1524 aaKnown RBP21.23■□□□□ 0.99
CCHCR1-203ENST00000396268 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
CCHCR1-203ENST00000396268 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
CCHCR1-203ENST00000396268 CUX2O14529 1486 aa21.22■□□□□ 0.99
CCHCR1-203ENST00000396268 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
CCHCR1-203ENST00000396268 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
CCHCR1-203ENST00000396268 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
CCHCR1-203ENST00000396268 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
CCHCR1-203ENST00000396268 KIF21BO75037 1637 aa21.17■□□□□ 0.98
CCHCR1-203ENST00000396268 YTHDC1Q96MU7 727 aaKnown RBP21.16■□□□□ 0.98
CCHCR1-203ENST00000396268 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
CCHCR1-203ENST00000396268 PRXQ9BXM0 1461 aa21.11■□□□□ 0.97
CCHCR1-203ENST00000396268 IGF1RP08069 1367 aa21.09■□□□□ 0.97
CCHCR1-203ENST00000396268 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
CCHCR1-203ENST00000396268 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
CCHCR1-203ENST00000396268 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
CCHCR1-203ENST00000396268 CLIP1P30622 1438 aa20.99■□□□□ 0.95
CCHCR1-203ENST00000396268 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
CCHCR1-203ENST00000396268 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
CCHCR1-203ENST00000396268 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
CCHCR1-203ENST00000396268 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
CCHCR1-203ENST00000396268 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
CCHCR1-203ENST00000396268 APLP2Q06481 763 aa20.93■□□□□ 0.94
CCHCR1-203ENST00000396268 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms