RNA–Protein interactions for RNA: ENST00000396265.4

TSPO-203, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPO, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-203ENST00000396265 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
TSPO-203ENST00000396265 ABCC9O60706 1549 aa32.61■■■□□ 2.81
TSPO-203ENST00000396265 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
TSPO-203ENST00000396265 RB1CC1Q8TDY2 1594 aa30.87■■■□□ 2.53
TSPO-203ENST00000396265 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
TSPO-203ENST00000396265 NACADO15069 1562 aa30.56■■■□□ 2.48
TSPO-203ENST00000396265 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
TSPO-203ENST00000396265 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
TSPO-203ENST00000396265 UNC13AQ9UPW8 1703 aa30.32■■■□□ 2.44
TSPO-203ENST00000396265 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
TSPO-203ENST00000396265 MYO15BQ96JP2 1530 aa29.99■■■□□ 2.39
TSPO-203ENST00000396265 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
TSPO-203ENST00000396265 DCAF1Q9Y4B6 1507 aa29.52■■■□□ 2.32
TSPO-203ENST00000396265 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
TSPO-203ENST00000396265 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
TSPO-203ENST00000396265 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
TSPO-203ENST00000396265 CECR2Q9BXF3 1484 aa29.37■■■□□ 2.29
TSPO-203ENST00000396265 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
TSPO-203ENST00000396265 DNAJC5Q9H3Z4 198 aa28.46■■■□□ 2.15
TSPO-203ENST00000396265 NCAPD3P42695 1498 aa28.2■■■□□ 2.1
TSPO-203ENST00000396265 CUX2O14529 1486 aa28.15■■■□□ 2.1
TSPO-203ENST00000396265 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
TSPO-203ENST00000396265 ATAD2BQ9ULI0 1458 aa28.11■■■□□ 2.09
TSPO-203ENST00000396265 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
TSPO-203ENST00000396265 SMARCA2P51531 1590 aa28■■■□□ 2.07
TSPO-203ENST00000396265 HMGXB3Q12766 1538 aa27.99■■■□□ 2.07
TSPO-203ENST00000396265 NESP48681 1621 aa27.96■■■□□ 2.07
TSPO-203ENST00000396265 BAZ1BQ9UIG0 1483 aaKnown RBP27.83■■■□□ 2.05
TSPO-203ENST00000396265 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
TSPO-203ENST00000396265 PEG3Q9GZU2 1588 aa27.73■■■□□ 2.03
TSPO-203ENST00000396265 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
TSPO-203ENST00000396265 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
TSPO-203ENST00000396265 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
TSPO-203ENST00000396265 KIF21AQ7Z4S6 1674 aa27.64■■■□□ 2.02
TSPO-203ENST00000396265 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
TSPO-203ENST00000396265 WIZO95785 1651 aa27.36■■□□□ 1.97
TSPO-203ENST00000396265 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
TSPO-203ENST00000396265 MRC2Q9UBG0 1479 aa27.28■■□□□ 1.96
TSPO-203ENST00000396265 WDR62O43379 1518 aa27.23■■□□□ 1.95
TSPO-203ENST00000396265 TRIM41Q8WV44 630 aa27.18■■□□□ 1.94
TSPO-203ENST00000396265 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
TSPO-203ENST00000396265 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
TSPO-203ENST00000396265 CFTRP13569 1480 aa26.98■■□□□ 1.91
TSPO-203ENST00000396265 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
TSPO-203ENST00000396265 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
TSPO-203ENST00000396265 URB2Q14146 1524 aaKnown RBP26.89■■□□□ 1.89
TSPO-203ENST00000396265 OSCARQ8IYS5 282 aa26.81■■□□□ 1.88
TSPO-203ENST00000396265 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
TSPO-203ENST00000396265 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
TSPO-203ENST00000396265 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
TSPO-203ENST00000396265 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
TSPO-203ENST00000396265 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
TSPO-203ENST00000396265 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
TSPO-203ENST00000396265 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
TSPO-203ENST00000396265 TOPBP1Q92547 1522 aa26.54■■□□□ 1.84
TSPO-203ENST00000396265 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
TSPO-203ENST00000396265 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
TSPO-203ENST00000396265 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
TSPO-203ENST00000396265 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
TSPO-203ENST00000396265 CHD1O14646 1710 aa26.38■■□□□ 1.81
TSPO-203ENST00000396265 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
TSPO-203ENST00000396265 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.811e-6■■■■□ 25.3
TSPO-203ENST00000396265 CYB5RLQ6IPT4 315 aa26.25■■□□□ 1.79
TSPO-203ENST00000396265 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
TSPO-203ENST00000396265 FBLN2P98095 1184 aa26.21■■□□□ 1.79
TSPO-203ENST00000396265 RAD54L2Q9Y4B4 1467 aa26.18■■□□□ 1.78
TSPO-203ENST00000396265 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
TSPO-203ENST00000396265 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
TSPO-203ENST00000396265 SOGA1O94964 1423 aa26.1■■□□□ 1.77
TSPO-203ENST00000396265 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
TSPO-203ENST00000396265 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
TSPO-203ENST00000396265 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
TSPO-203ENST00000396265 CUX1P39880 1505 aa25.99■■□□□ 1.75
TSPO-203ENST00000396265 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
TSPO-203ENST00000396265 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
TSPO-203ENST00000396265 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
TSPO-203ENST00000396265 CHMP7Q8WUX9 453 aaPredicted RBP25.93■■□□□ 1.74
TSPO-203ENST00000396265 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
TSPO-203ENST00000396265 GRIN2BQ13224 1484 aa25.89■■□□□ 1.73
TSPO-203ENST00000396265 PBRM1Q86U86 1689 aa25.89■■□□□ 1.73
TSPO-203ENST00000396265 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
TSPO-203ENST00000396265 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
TSPO-203ENST00000396265 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
TSPO-203ENST00000396265 ABCA10Q8WWZ4 1543 aa25.71■■□□□ 1.71
TSPO-203ENST00000396265 ERCC6L2Q5T890 1561 aa25.62■■□□□ 1.69
TSPO-203ENST00000396265 GRIN2AQ12879 1464 aa25.59■■□□□ 1.69
TSPO-203ENST00000396265 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
TSPO-203ENST00000396265 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
TSPO-203ENST00000396265 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
TSPO-203ENST00000396265 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
TSPO-203ENST00000396265 BIVM-ERCC5R4GMW8 1640 aa25.51■■□□□ 1.67
TSPO-203ENST00000396265 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
TSPO-203ENST00000396265 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
TSPO-203ENST00000396265 NUP160Q12769 1436 aa25.48■■□□□ 1.67
TSPO-203ENST00000396265 SHROOM2Q13796 1616 aa25.45■■□□□ 1.67
TSPO-203ENST00000396265 FHAD1B1AJZ9 1412 aa25.42■■□□□ 1.66
TSPO-203ENST00000396265 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
TSPO-203ENST00000396265 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
TSPO-203ENST00000396265 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
TSPO-203ENST00000396265 JPH4Q96JJ6 628 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms