RNA–Protein interactions for RNA: ENST00000395862.7

ATP6V1C1-201, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1C1, Length 5,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-201ENST00000395862 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
ATP6V1C1-201ENST00000395862 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
ATP6V1C1-201ENST00000395862 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
ATP6V1C1-201ENST00000395862 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
ATP6V1C1-201ENST00000395862 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
ATP6V1C1-201ENST00000395862 ABCC9O60706 1549 aa14.41□□□□□ -0.1
ATP6V1C1-201ENST00000395862 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
ATP6V1C1-201ENST00000395862 APLP2Q06481 763 aa14.24□□□□□ -0.13
ATP6V1C1-201ENST00000395862 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
ATP6V1C1-201ENST00000395862 ATP1B4Q9UN42 357 aaPredicted RBP14.04□□□□□ -0.16
ATP6V1C1-201ENST00000395862 RANGAP1P46060 587 aaPredicted RBP14.03□□□□□ -0.16
ATP6V1C1-201ENST00000395862 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
ATP6V1C1-201ENST00000395862 TTBK1Q5TCY1 1321 aaPredicted RBP13.87□□□□□ -0.19
ATP6V1C1-201ENST00000395862 MYT1LQ9UL68 1186 aa13.83□□□□□ -0.2
ATP6V1C1-201ENST00000395862 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
ATP6V1C1-201ENST00000395862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
ATP6V1C1-201ENST00000395862 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
ATP6V1C1-201ENST00000395862 FBLN2P98095 1184 aa13.67□□□□□ -0.22
ATP6V1C1-201ENST00000395862 SCRIBQ14160 1630 aa13.43□□□□□ -0.26
ATP6V1C1-201ENST00000395862 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
ATP6V1C1-201ENST00000395862 CHIC1Q5VXU3 224 aa13.41□□□□□ -0.26
ATP6V1C1-201ENST00000395862 CCDC180Q9P1Z9 1646 aa13.38□□□□□ -0.27
ATP6V1C1-201ENST00000395862 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
ATP6V1C1-201ENST00000395862 ITGAEP38570 1179 aa13.22□□□□□ -0.29
ATP6V1C1-201ENST00000395862 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
ATP6V1C1-201ENST00000395862 ESF1Q9H501 851 aaKnown RBP13.18□□□□□ -0.3
ATP6V1C1-201ENST00000395862 NACADO15069 1562 aa13.17□□□□□ -0.3
ATP6V1C1-201ENST00000395862 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
ATP6V1C1-201ENST00000395862 CHMP7Q8WUX9 453 aaPredicted RBP13.13□□□□□ -0.31
ATP6V1C1-201ENST00000395862 ZCCHC6Q5VYS8 1495 aaKnown RBP13.11□□□□□ -0.31
ATP6V1C1-201ENST00000395862 PPARGC1BQ86YN6 1023 aaKnown RBP13.09□□□□□ -0.31
ATP6V1C1-201ENST00000395862 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
ATP6V1C1-201ENST00000395862 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
ATP6V1C1-201ENST00000395862 BCANQ96GW7 911 aa13.06□□□□□ -0.32
ATP6V1C1-201ENST00000395862 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
ATP6V1C1-201ENST00000395862 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
ATP6V1C1-201ENST00000395862 P3H3Q8IVL6 736 aa13.02□□□□□ -0.32
ATP6V1C1-201ENST00000395862 FAM50AQ14320 339 aaKnown RBP13.01□□□□□ -0.33
ATP6V1C1-201ENST00000395862 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
ATP6V1C1-201ENST00000395862 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
ATP6V1C1-201ENST00000395862 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
ATP6V1C1-201ENST00000395862 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
ATP6V1C1-201ENST00000395862 ZNF777Q9ULD5 760 aaPredicted RBP12.95□□□□□ -0.34
ATP6V1C1-201ENST00000395862 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
ATP6V1C1-201ENST00000395862 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
ATP6V1C1-201ENST00000395862 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
ATP6V1C1-201ENST00000395862 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
ATP6V1C1-201ENST00000395862 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
ATP6V1C1-201ENST00000395862 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
ATP6V1C1-201ENST00000395862 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
ATP6V1C1-201ENST00000395862 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
ATP6V1C1-201ENST00000395862 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
ATP6V1C1-201ENST00000395862 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
ATP6V1C1-201ENST00000395862 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
ATP6V1C1-201ENST00000395862 CNGB1Q14028 1251 aaPredicted RBP12.71□□□□□ -0.37
ATP6V1C1-201ENST00000395862 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.37
ATP6V1C1-201ENST00000395862 PLEKHD1A6NEE1 506 aa12.68□□□□□ -0.38
ATP6V1C1-201ENST00000395862 BAZ1AQ9NRL2 1556 aaPredicted RBP12.67□□□□□ -0.38
ATP6V1C1-201ENST00000395862 TSPY4P0CV99 314 aa12.66□□□□□ -0.38
ATP6V1C1-201ENST00000395862 TSPY10P0CW01 314 aa12.66□□□□□ -0.38
ATP6V1C1-201ENST00000395862 TRIM26Q12899 539 aaPredicted RBP12.65□□□□□ -0.38
ATP6V1C1-201ENST00000395862 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
ATP6V1C1-201ENST00000395862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATP6V1C1-201ENST00000395862 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
ATP6V1C1-201ENST00000395862 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
ATP6V1C1-201ENST00000395862 RSF1Q96T23 1441 aaPredicted RBP12.58□□□□□ -0.4
ATP6V1C1-201ENST00000395862 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
ATP6V1C1-201ENST00000395862 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
ATP6V1C1-201ENST00000395862 AEBP2Q6ZN18 517 aaPredicted RBP12.56□□□□□ -0.4
ATP6V1C1-201ENST00000395862 PPP1R15AO75807 674 aaPredicted RBP12.56□□□□□ -0.4
ATP6V1C1-201ENST00000395862 MTUS2Q5JR59 1369 aa12.55□□□□□ -0.4
ATP6V1C1-201ENST00000395862 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
ATP6V1C1-201ENST00000395862 SCAF1Q9H7N4 1312 aaKnown RBP12.54□□□□□ -0.4
ATP6V1C1-201ENST00000395862 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
ATP6V1C1-201ENST00000395862 NEFMP07197 916 aa12.52□□□□□ -0.41
ATP6V1C1-201ENST00000395862 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
ATP6V1C1-201ENST00000395862 NEFLP07196 543 aa12.5□□□□□ -0.41
ATP6V1C1-201ENST00000395862 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
ATP6V1C1-201ENST00000395862 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
ATP6V1C1-201ENST00000395862 CYB5RLQ6IPT4 315 aa12.45□□□□□ -0.42
ATP6V1C1-201ENST00000395862 MYO15BQ96JP2 1530 aa12.45□□□□□ -0.42
ATP6V1C1-201ENST00000395862 HAP1P54257 671 aaPredicted RBP12.44□□□□□ -0.42
ATP6V1C1-201ENST00000395862 MLECQ14165 292 aa12.44□□□□□ -0.42
ATP6V1C1-201ENST00000395862 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
ATP6V1C1-201ENST00000395862 CARMIL2Q6F5E8 1435 aa12.43□□□□□ -0.42
ATP6V1C1-201ENST00000395862 SOGA1O94964 1423 aa12.42□□□□□ -0.42
ATP6V1C1-201ENST00000395862 CFDP1Q9UEE9 299 aaPredicted RBP12.42□□□□□ -0.42
ATP6V1C1-201ENST00000395862 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
ATP6V1C1-201ENST00000395862 CUX2O14529 1486 aa12.41□□□□□ -0.42
ATP6V1C1-201ENST00000395862 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
ATP6V1C1-201ENST00000395862 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
ATP6V1C1-201ENST00000395862 A0A0G2JS52 829 aa12.4□□□□□ -0.42
ATP6V1C1-201ENST00000395862 SENP3Q9H4L4 574 aaPredicted RBP12.38□□□□□ -0.43
ATP6V1C1-201ENST00000395862 EEA1Q15075 1411 aa12.36□□□□□ -0.43
ATP6V1C1-201ENST00000395862 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
ATP6V1C1-201ENST00000395862 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
ATP6V1C1-201ENST00000395862 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
ATP6V1C1-201ENST00000395862 ATAD2BQ9ULI0 1458 aa12.33□□□□□ -0.44
ATP6V1C1-201ENST00000395862 CLIP1P30622 1438 aa12.32□□□□□ -0.44
ATP6V1C1-201ENST00000395862 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms