RNA–Protein interactions for RNA: ENST00000395837.1

UBB-202, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBB, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-202ENST00000395837 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.51
UBB-202ENST00000395837 ABCC9O60706 1549 aa22.21■■□□□ 1.15
UBB-202ENST00000395837 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
UBB-202ENST00000395837 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
UBB-202ENST00000395837 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
UBB-202ENST00000395837 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
UBB-202ENST00000395837 NACADO15069 1562 aa20.8■□□□□ 0.92
UBB-202ENST00000395837 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
UBB-202ENST00000395837 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
UBB-202ENST00000395837 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
UBB-202ENST00000395837 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
UBB-202ENST00000395837 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
UBB-202ENST00000395837 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
UBB-202ENST00000395837 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
UBB-202ENST00000395837 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
UBB-202ENST00000395837 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
UBB-202ENST00000395837 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
UBB-202ENST00000395837 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
UBB-202ENST00000395837 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
UBB-202ENST00000395837 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
UBB-202ENST00000395837 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
UBB-202ENST00000395837 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
UBB-202ENST00000395837 SMARCA4P51532 1647 aa19.12■□□□□ 0.65
UBB-202ENST00000395837 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
UBB-202ENST00000395837 CUX2O14529 1486 aa19.09■□□□□ 0.65
UBB-202ENST00000395837 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
UBB-202ENST00000395837 BAZ1BQ9UIG0 1483 aaKnown RBP19.03■□□□□ 0.64
UBB-202ENST00000395837 NESP48681 1621 aa19.02■□□□□ 0.64
UBB-202ENST00000395837 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
UBB-202ENST00000395837 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
UBB-202ENST00000395837 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
UBB-202ENST00000395837 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
UBB-202ENST00000395837 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
UBB-202ENST00000395837 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
UBB-202ENST00000395837 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
UBB-202ENST00000395837 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
UBB-202ENST00000395837 WIZO95785 1651 aa18.66■□□□□ 0.58
UBB-202ENST00000395837 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
UBB-202ENST00000395837 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
UBB-202ENST00000395837 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.55
UBB-202ENST00000395837 WDR62O43379 1518 aa18.5■□□□□ 0.55
UBB-202ENST00000395837 FANCD2Q9BXW9 1451 aa18.47■□□□□ 0.55
UBB-202ENST00000395837 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
UBB-202ENST00000395837 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.54
UBB-202ENST00000395837 CFTRP13569 1480 aa18.39■□□□□ 0.53
UBB-202ENST00000395837 URB2Q14146 1524 aaKnown RBP18.31■□□□□ 0.52
UBB-202ENST00000395837 OSCARQ8IYS5 282 aa18.27■□□□□ 0.52
UBB-202ENST00000395837 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
UBB-202ENST00000395837 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
UBB-202ENST00000395837 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
UBB-202ENST00000395837 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
UBB-202ENST00000395837 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
UBB-202ENST00000395837 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
UBB-202ENST00000395837 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
UBB-202ENST00000395837 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
UBB-202ENST00000395837 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
UBB-202ENST00000395837 ABCC8Q09428 1581 aa18.01■□□□□ 0.47
UBB-202ENST00000395837 DNMBPQ6XZF7 1577 aa18.01■□□□□ 0.47
UBB-202ENST00000395837 FBLN2P98095 1184 aa17.99■□□□□ 0.47
UBB-202ENST00000395837 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.47
UBB-202ENST00000395837 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
UBB-202ENST00000395837 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
UBB-202ENST00000395837 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
UBB-202ENST00000395837 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
UBB-202ENST00000395837 CHD1O14646 1710 aa17.89■□□□□ 0.46
UBB-202ENST00000395837 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
UBB-202ENST00000395837 SOGA1O94964 1423 aa17.85■□□□□ 0.45
UBB-202ENST00000395837 TDRD9Q8NDG6 1382 aaKnown RBP17.85■□□□□ 0.45
UBB-202ENST00000395837 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
UBB-202ENST00000395837 FGD5Q6ZNL6 1462 aa17.81■□□□□ 0.44
UBB-202ENST00000395837 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
UBB-202ENST00000395837 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
UBB-202ENST00000395837 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
UBB-202ENST00000395837 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
UBB-202ENST00000395837 CUX1P39880 1505 aa17.75■□□□□ 0.43
UBB-202ENST00000395837 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
UBB-202ENST00000395837 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
UBB-202ENST00000395837 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
UBB-202ENST00000395837 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
UBB-202ENST00000395837 MAGI1Q96QZ7 1491 aaPredicted RBP17.68■□□□□ 0.42
UBB-202ENST00000395837 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
UBB-202ENST00000395837 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
UBB-202ENST00000395837 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
UBB-202ENST00000395837 PBRM1Q86U86 1689 aa17.61■□□□□ 0.41
UBB-202ENST00000395837 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
UBB-202ENST00000395837 ABCA5Q8WWZ7 1642 aa17.52■□□□□ 0.4
UBB-202ENST00000395837 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
UBB-202ENST00000395837 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
UBB-202ENST00000395837 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
UBB-202ENST00000395837 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
UBB-202ENST00000395837 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
UBB-202ENST00000395837 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
UBB-202ENST00000395837 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.38
UBB-202ENST00000395837 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
UBB-202ENST00000395837 NUP160Q12769 1436 aa17.36■□□□□ 0.37
UBB-202ENST00000395837 ERICH3Q5RHP9 1530 aa17.32■□□□□ 0.36
UBB-202ENST00000395837 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
UBB-202ENST00000395837 SHROOM2Q13796 1616 aa17.26■□□□□ 0.35
UBB-202ENST00000395837 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
UBB-202ENST00000395837 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms