RNA–Protein interactions for RNA: ENST00000395068.8

GRINA-202, Transcript of glutamate ionotropic receptor NMDA type subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRINA, Length 1,814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRINA-202ENST00000395068 PCBP2Q15366 365 aaKnown RBP eCLIP20.6■□□□□ 0.891e-16■■■■■ 36.2
GRINA-202ENST00000395068 AQRO60306 1485 aaKnown RBP eCLIP33.66■■■□□ 2.983e-12■■■■■ 47.9
GRINA-202ENST00000395068 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.85■□□□□ 0.773e-12■■■■■ 34.3
GRINA-202ENST00000395068 SF3A3Q12874 501 aaKnown RBP eCLIP20.83■□□□□ 0.931e-11■■■■■ 29.2
GRINA-202ENST00000395068 RPS3P23396 243 aaKnown RBP eCLIP20.86■□□□□ 0.936e-11■■■□□ 14.8
GRINA-202ENST00000395068 YBX3P16989 372 aaKnown RBP eCLIP24.45■■□□□ 1.56e-11■■□□□ 14.1
GRINA-202ENST00000395068 SF3B4Q15427 424 aaKnown RBP eCLIP18.35■□□□□ 0.531e-10■■■■□ 21.6
GRINA-202ENST00000395068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.75■□□□□ 0.271e-10■■■□□ 15.8
GRINA-202ENST00000395068 NCBP2P52298 156 aaKnown RBP eCLIP19.82■□□□□ 0.762e-10■■□□□ 11.6
GRINA-202ENST00000395068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.47■■■□□ 2.475e-10■□□□□ 10.4
GRINA-202ENST00000395068 SND1Q7KZF4 910 aaKnown RBP eCLIP21.79■■□□□ 1.085e-10■■□□□ 11.7
GRINA-202ENST00000395068 PABPC4Q13310 644 aaKnown RBP eCLIP23.63■■□□□ 1.378e-10■■■■■ 39.2
GRINA-202ENST00000395068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.05■■□□□ 1.445e-9■□□□□ 10.8
GRINA-202ENST00000395068 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.79■■□□□ 1.087e-9■■■■■ 72.6
GRINA-202ENST00000395068 HNRNPKP61978 463 aaKnown RBP eCLIP20.13■□□□□ 0.818e-9■■■■■ 58.5
GRINA-202ENST00000395068 DDX3XO00571 662 aaKnown RBP eCLIP22.63■■□□□ 1.211e-8■■■■■ 82.8
GRINA-202ENST00000395068 LARP4Q71RC2 724 aaKnown RBP eCLIP20.47■□□□□ 0.871e-8■■■□□ 16.6
GRINA-202ENST00000395068 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.15■■□□□ 1.142e-8■■■■■ 40.2
GRINA-202ENST00000395068 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.9■□□□□ 0.626e-8■□□□□ 9
GRINA-202ENST00000395068 UPF1Q92900 1129 aaKnown RBP eCLIP25.16■■□□□ 1.628e-8■■■■■ 28.8
GRINA-202ENST00000395068 EFTUD2Q15029 972 aaKnown RBP eCLIP21.36■■□□□ 1.011e-7■■■■□ 25.4
GRINA-202ENST00000395068 DDX6P26196 483 aaKnown RBP eCLIP21.45■■□□□ 1.032e-7■■■■□ 23.9
GRINA-202ENST00000395068 NKRFO15226 690 aaKnown RBP eCLIP23.22■■□□□ 1.312e-7■■□□□ 14
GRINA-202ENST00000395068 AKAP1Q92667 903 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■□□□ 13.9
GRINA-202ENST00000395068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.2■■□□□ 1.32e-7■■■□□ 19.2
GRINA-202ENST00000395068 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.15■□□□□ 0.982e-7■■■■■ 44.1
GRINA-202ENST00000395068 SMNDC1O75940 238 aaKnown RBP eCLIP19.2■□□□□ 0.663e-7■■□□□ 12.1
GRINA-202ENST00000395068 PPIGQ13427 754 aaKnown RBP eCLIP21.96■■□□□ 1.113e-7■■■□□ 17.5
GRINA-202ENST00000395068 PUM1Q14671 1186 aaKnown RBP eCLIP19.59■□□□□ 0.734e-7■■□□□ 11.8
GRINA-202ENST00000395068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.85■■■□□ 2.696e-7■■■□□ 18.5
GRINA-202ENST00000395068 PCBP1Q15365 356 aaKnown RBP eCLIP22.73■■□□□ 1.231e-6■■■■■ 59.6
GRINA-202ENST00000395068 IGF2BP3O00425 579 aaKnown RBP eCLIP23.44■■□□□ 1.341e-6■■■■□ 22.1
GRINA-202ENST00000395068 RBFOX2O43251 390 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■□□□□ 10.2
GRINA-202ENST00000395068 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.13■□□□□ 0.812e-6■□□□□ 9.4
GRINA-202ENST00000395068 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.65■■□□□ 1.225e-6■■■■□ 22.7
GRINA-202ENST00000395068 SF3B1O75533 1304 aaKnown RBP eCLIP22.06■■□□□ 1.125e-6■■■■■ 129.2
GRINA-202ENST00000395068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.71■■□□□ 1.236e-6■■■■■ 61.3
GRINA-202ENST00000395068 ZRANB2O95218 330 aaKnown RBP eCLIP22.03■■□□□ 1.127e-6■■■□□ 15
Retrieved 38 of 38 RNA–protein pairs in 6.8 ms