RNA–Protein interactions for RNA: ENST00000394979.2

ZNF646-202, Transcript of zinc finger protein 646, humanhuman

APPRIS ALT2 BASIC

Gene ZNF646, Length 8,118 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF646-202ENST00000394979 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
ZNF646-202ENST00000394979 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
ZNF646-202ENST00000394979 NISCHQ9Y2I1 1504 aa20.3■□□□□ 0.84
ZNF646-202ENST00000394979 ERICH6Q7L0X2 663 aa20.18■□□□□ 0.82
ZNF646-202ENST00000394979 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
ZNF646-202ENST00000394979 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
ZNF646-202ENST00000394979 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.76
ZNF646-202ENST00000394979 APLP2Q06481 763 aa19.73■□□□□ 0.75
ZNF646-202ENST00000394979 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
ZNF646-202ENST00000394979 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
ZNF646-202ENST00000394979 MYT1Q01538 1121 aa19.52■□□□□ 0.71
ZNF646-202ENST00000394979 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
ZNF646-202ENST00000394979 NEFLP07196 543 aa19.3■□□□□ 0.68
ZNF646-202ENST00000394979 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
ZNF646-202ENST00000394979 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
ZNF646-202ENST00000394979 ZEB1P37275 1124 aaPredicted RBP19.17■□□□□ 0.66
ZNF646-202ENST00000394979 DAXXQ9UER7 740 aaPredicted RBP19.16■□□□□ 0.66
ZNF646-202ENST00000394979 YTHDC1Q96MU7 727 aaKnown RBP19.16■□□□□ 0.66
ZNF646-202ENST00000394979 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
ZNF646-202ENST00000394979 RANGAP1P46060 587 aaPredicted RBP18.84■□□□□ 0.61
ZNF646-202ENST00000394979 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
ZNF646-202ENST00000394979 ZNF316A6NFI3 1004 aaPredicted RBP18.65■□□□□ 0.58
ZNF646-202ENST00000394979 RTL5Q5HYW3 569 aaPredicted RBP18.57■□□□□ 0.56
ZNF646-202ENST00000394979 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
ZNF646-202ENST00000394979 POLR3GLQ9BT43 218 aa18.47■□□□□ 0.55
ZNF646-202ENST00000394979 TRIM26Q12899 539 aaPredicted RBP18.47■□□□□ 0.55
ZNF646-202ENST00000394979 CLSPNQ9HAW4 1339 aa18.43■□□□□ 0.54
ZNF646-202ENST00000394979 MYT1LQ9UL68 1186 aa18.41■□□□□ 0.54
ZNF646-202ENST00000394979 HRCP23327 699 aa18.35■□□□□ 0.53
ZNF646-202ENST00000394979 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
ZNF646-202ENST00000394979 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
ZNF646-202ENST00000394979 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
ZNF646-202ENST00000394979 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
ZNF646-202ENST00000394979 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
ZNF646-202ENST00000394979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
ZNF646-202ENST00000394979 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
ZNF646-202ENST00000394979 ITGAEP38570 1179 aa18.04■□□□□ 0.48
ZNF646-202ENST00000394979 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
ZNF646-202ENST00000394979 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
ZNF646-202ENST00000394979 SLC24A1O60721 1099 aa17.87■□□□□ 0.45
ZNF646-202ENST00000394979 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.44
ZNF646-202ENST00000394979 ANP32BQ92688 251 aaKnown RBP17.81■□□□□ 0.44
ZNF646-202ENST00000394979 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
ZNF646-202ENST00000394979 GLIPR1L2Q4G1C9 344 aa17.8■□□□□ 0.44
ZNF646-202ENST00000394979 CANXP27824 592 aaKnown RBP17.78■□□□□ 0.44
ZNF646-202ENST00000394979 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
ZNF646-202ENST00000394979 BCANQ96GW7 911 aa17.68■□□□□ 0.42
ZNF646-202ENST00000394979 ANP32AP39687 249 aaKnown RBP17.65■□□□□ 0.42
ZNF646-202ENST00000394979 NEFMP07197 916 aa17.63■□□□□ 0.41
ZNF646-202ENST00000394979 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.4
ZNF646-202ENST00000394979 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
ZNF646-202ENST00000394979 ANP32CO43423 234 aa17.54■□□□□ 0.4
ZNF646-202ENST00000394979 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
ZNF646-202ENST00000394979 CDK11BP21127 795 aaKnown RBP17.51■□□□□ 0.39
ZNF646-202ENST00000394979 FAM50AQ14320 339 aaKnown RBP17.5■□□□□ 0.39
ZNF646-202ENST00000394979 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
ZNF646-202ENST00000394979 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
ZNF646-202ENST00000394979 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
ZNF646-202ENST00000394979 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
ZNF646-202ENST00000394979 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
ZNF646-202ENST00000394979 ARXQ96QS3 562 aa17.24■□□□□ 0.35
ZNF646-202ENST00000394979 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
ZNF646-202ENST00000394979 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
ZNF646-202ENST00000394979 NBR1Q14596 966 aa17.15■□□□□ 0.34
ZNF646-202ENST00000394979 ABCC9O60706 1549 aa17.08■□□□□ 0.33
ZNF646-202ENST00000394979 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
ZNF646-202ENST00000394979 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
ZNF646-202ENST00000394979 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
ZNF646-202ENST00000394979 NCLP19338 710 aaKnown RBP17.02■□□□□ 0.32
ZNF646-202ENST00000394979 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.31
ZNF646-202ENST00000394979 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
ZNF646-202ENST00000394979 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.31
ZNF646-202ENST00000394979 FKBP8Q14318 412 aa16.98■□□□□ 0.31
ZNF646-202ENST00000394979 MYH16Q9H6N6 1097 aa16.98■□□□□ 0.31
ZNF646-202ENST00000394979 ZRSR1Q15695 479 aaKnown RBP16.97■□□□□ 0.31
ZNF646-202ENST00000394979 TULP1O00294 542 aaPredicted RBP16.95■□□□□ 0.3
ZNF646-202ENST00000394979 TONSLQ96HA7 1378 aa16.95■□□□□ 0.3
ZNF646-202ENST00000394979 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
ZNF646-202ENST00000394979 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
ZNF646-202ENST00000394979 PTMAP06454 111 aaKnown RBP16.91■□□□□ 0.3
ZNF646-202ENST00000394979 SCRIBQ14160 1630 aa16.9■□□□□ 0.3
ZNF646-202ENST00000394979 CCDC136Q96JN2 1154 aa16.89■□□□□ 0.29
ZNF646-202ENST00000394979 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
ZNF646-202ENST00000394979 ANP32EQ9BTT0 268 aa16.89■□□□□ 0.29
ZNF646-202ENST00000394979 BECN1Q14457 450 aa16.88■□□□□ 0.29
ZNF646-202ENST00000394979 A0A0G2JS52 829 aa16.87■□□□□ 0.29
ZNF646-202ENST00000394979 FBLN2P98095 1184 aa16.87■□□□□ 0.29
ZNF646-202ENST00000394979 SCAF1Q9H7N4 1312 aaKnown RBP16.87■□□□□ 0.29
ZNF646-202ENST00000394979 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
ZNF646-202ENST00000394979 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
ZNF646-202ENST00000394979 P3H3Q8IVL6 736 aa16.83■□□□□ 0.29
ZNF646-202ENST00000394979 SALL2Q9Y467 1007 aaPredicted RBP16.83■□□□□ 0.29
ZNF646-202ENST00000394979 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.28
ZNF646-202ENST00000394979 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
ZNF646-202ENST00000394979 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
ZNF646-202ENST00000394979 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
ZNF646-202ENST00000394979 CHGAP10645 457 aaKnown RBP16.8■□□□□ 0.28
ZNF646-202ENST00000394979 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
ZNF646-202ENST00000394979 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
ZNF646-202ENST00000394979 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms