RNA–Protein interactions for RNA: ENST00000394631.7

GAR1-202, Transcript of GAR1 ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAR1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1-202ENST00000394631 NISCHQ9Y2I1 1504 aa43.02■■■■■ 4.48
GAR1-202ENST00000394631 ABCC9O60706 1549 aa38.81■■■■□ 3.8
GAR1-202ENST00000394631 CCDC180Q9P1Z9 1646 aa38.6■■■■□ 3.77
GAR1-202ENST00000394631 RB1CC1Q8TDY2 1594 aa36.81■■■■□ 3.48
GAR1-202ENST00000394631 DNAJC5BQ9UF47 199 aa36.57■■■■□ 3.44
GAR1-202ENST00000394631 NACADO15069 1562 aa36.53■■■■□ 3.44
GAR1-202ENST00000394631 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
GAR1-202ENST00000394631 PABPN1Q86U42 306 aaKnown RBP eCLIP36.13■■■■□ 3.37
GAR1-202ENST00000394631 UNC13AQ9UPW8 1703 aa36.05■■■■□ 3.36
GAR1-202ENST00000394631 MYO15BQ96JP2 1530 aa35.97■■■■□ 3.35
GAR1-202ENST00000394631 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
GAR1-202ENST00000394631 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
GAR1-202ENST00000394631 DCAF1Q9Y4B6 1507 aa35.47■■■■□ 3.27
GAR1-202ENST00000394631 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
GAR1-202ENST00000394631 SHROOM4Q9ULL8 1493 aa35.21■■■■□ 3.23
GAR1-202ENST00000394631 CC2D2AQ9P2K1 1620 aa35.03■■■■□ 3.2
GAR1-202ENST00000394631 CECR2Q9BXF3 1484 aa34.95■■■■□ 3.19
GAR1-202ENST00000394631 EIF4G1Q04637 1599 aaKnown RBP34.91■■■■□ 3.18
GAR1-202ENST00000394631 NCAPD3P42695 1498 aa33.75■■■□□ 2.99
GAR1-202ENST00000394631 ATAD2BQ9ULI0 1458 aa33.66■■■□□ 2.98
GAR1-202ENST00000394631 DNAJC5Q9H3Z4 198 aa33.59■■■□□ 2.97
GAR1-202ENST00000394631 SMARCA4P51532 1647 aa33.58■■■□□ 2.97
GAR1-202ENST00000394631 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
GAR1-202ENST00000394631 ERCC6Q03468 1493 aa33.47■■■□□ 2.95
GAR1-202ENST00000394631 HMGXB3Q12766 1538 aa33.47■■■□□ 2.95
GAR1-202ENST00000394631 CUX2O14529 1486 aa33.43■■■□□ 2.94
GAR1-202ENST00000394631 BAZ1AQ9NRL2 1556 aaPredicted RBP33.37■■■□□ 2.93
GAR1-202ENST00000394631 NESP48681 1621 aa33.32■■■□□ 2.92
GAR1-202ENST00000394631 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
GAR1-202ENST00000394631 PEG3Q9GZU2 1588 aa33.24■■■□□ 2.91
GAR1-202ENST00000394631 MROH2BQ7Z745 1585 aa33.18■■■□□ 2.9
GAR1-202ENST00000394631 LAMC3Q9Y6N6 1575 aa32.98■■■□□ 2.87
GAR1-202ENST00000394631 THOC2Q8NI27 1593 aaKnown RBP32.97■■■□□ 2.87
GAR1-202ENST00000394631 KIF21AQ7Z4S6 1674 aa32.85■■■□□ 2.85
GAR1-202ENST00000394631 PDS5BQ9NTI5 1447 aa32.79■■■□□ 2.84
GAR1-202ENST00000394631 WIZO95785 1651 aa32.78■■■□□ 2.84
GAR1-202ENST00000394631 CADPSQ9ULU8 1353 aa32.72■■■□□ 2.83
GAR1-202ENST00000394631 MRC2Q9UBG0 1479 aa32.54■■■□□ 2.8
GAR1-202ENST00000394631 WDR62O43379 1518 aa32.48■■■□□ 2.79
GAR1-202ENST00000394631 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
GAR1-202ENST00000394631 CEP164Q9UPV0 1460 aa32.38■■■□□ 2.77
GAR1-202ENST00000394631 FANCD2Q9BXW9 1451 aa32.36■■■□□ 2.77
GAR1-202ENST00000394631 CFTRP13569 1480 aa32.33■■■□□ 2.77
GAR1-202ENST00000394631 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
GAR1-202ENST00000394631 URB2Q14146 1524 aaKnown RBP32.13■■■□□ 2.73
GAR1-202ENST00000394631 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
GAR1-202ENST00000394631 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
GAR1-202ENST00000394631 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
GAR1-202ENST00000394631 OSCARQ8IYS5 282 aa31.89■■■□□ 2.7
GAR1-202ENST00000394631 ZNF608Q9ULD9 1512 aaPredicted RBP31.77■■■□□ 2.68
GAR1-202ENST00000394631 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
GAR1-202ENST00000394631 IFT140Q96RY7 1462 aa31.74■■■□□ 2.67
GAR1-202ENST00000394631 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
GAR1-202ENST00000394631 ABCC8Q09428 1581 aa31.59■■■□□ 2.65
GAR1-202ENST00000394631 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
GAR1-202ENST00000394631 RIMBP3CA6NJZ7 1639 aa31.53■■■□□ 2.64
GAR1-202ENST00000394631 RIMBP3BA6NNM3 1639 aa31.53■■■□□ 2.64
GAR1-202ENST00000394631 RIMBP3Q9UFD9 1639 aa31.53■■■□□ 2.64
GAR1-202ENST00000394631 TARBP1Q13395 1621 aaKnown RBP31.47■■■□□ 2.63
GAR1-202ENST00000394631 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.631e-6■■■■□ 23.2
GAR1-202ENST00000394631 POLA1P09884 1462 aaPredicted RBP31.42■■■□□ 2.62
GAR1-202ENST00000394631 ARHGEF11O15085 1522 aa31.41■■■□□ 2.62
GAR1-202ENST00000394631 CHD1O14646 1710 aa31.35■■■□□ 2.61
GAR1-202ENST00000394631 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
GAR1-202ENST00000394631 SOGA1O94964 1423 aa31.25■■■□□ 2.59
GAR1-202ENST00000394631 FBLN2P98095 1184 aa31.25■■■□□ 2.59
GAR1-202ENST00000394631 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
GAR1-202ENST00000394631 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
GAR1-202ENST00000394631 CYB5RLQ6IPT4 315 aa31.2■■■□□ 2.59
GAR1-202ENST00000394631 CUX1P39880 1505 aa31.18■■■□□ 2.58
GAR1-202ENST00000394631 SNAPC4Q5SXM2 1469 aa31.12■■■□□ 2.57
GAR1-202ENST00000394631 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
GAR1-202ENST00000394631 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
GAR1-202ENST00000394631 MAGI1Q96QZ7 1491 aaPredicted RBP30.99■■■□□ 2.55
GAR1-202ENST00000394631 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
GAR1-202ENST00000394631 GRIN2BQ13224 1484 aa30.98■■■□□ 2.55
GAR1-202ENST00000394631 CHMP7Q8WUX9 453 aaPredicted RBP30.97■■■□□ 2.55
GAR1-202ENST00000394631 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
GAR1-202ENST00000394631 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
GAR1-202ENST00000394631 SYNJ2O15056 1496 aa30.89■■■□□ 2.54
GAR1-202ENST00000394631 GAPVD1Q14C86 1478 aa30.87■■■□□ 2.53
GAR1-202ENST00000394631 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
GAR1-202ENST00000394631 TRHP20396 242 aaPredicted RBP30.86■■■□□ 2.53
GAR1-202ENST00000394631 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
GAR1-202ENST00000394631 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
GAR1-202ENST00000394631 WRNQ14191 1432 aaPredicted RBP eCLIP30.66■■■□□ 2.5
GAR1-202ENST00000394631 TOP2BQ02880 1626 aa30.61■■■□□ 2.49
GAR1-202ENST00000394631 BIVM-ERCC5R4GMW8 1640 aa30.61■■■□□ 2.49
GAR1-202ENST00000394631 GRIN2AQ12879 1464 aa30.6■■■□□ 2.49
GAR1-202ENST00000394631 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
GAR1-202ENST00000394631 ERCC6L2Q5T890 1561 aa30.55■■■□□ 2.48
GAR1-202ENST00000394631 CEP170Q5SW79 1584 aa30.53■■■□□ 2.48
GAR1-202ENST00000394631 NUP160Q12769 1436 aa30.51■■■□□ 2.47
GAR1-202ENST00000394631 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
GAR1-202ENST00000394631 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
GAR1-202ENST00000394631 SHROOM2Q13796 1616 aa30.38■■■□□ 2.45
GAR1-202ENST00000394631 PRG4Q92954 1404 aaPredicted RBP30.22■■■□□ 2.43
GAR1-202ENST00000394631 JPH4Q96JJ6 628 aa30.19■■■□□ 2.42
GAR1-202ENST00000394631 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
GAR1-202ENST00000394631 KIF13AQ9H1H9 1805 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 342.6 ms