RNA–Protein interactions for RNA: ENST00000394333.5

RPL23-204, Transcript of ribosomal protein L23, humanhuman

TSL 2 BASIC

Gene RPL23, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23-204ENST00000394333 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
RPL23-204ENST00000394333 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
RPL23-204ENST00000394333 ABCC9O60706 1549 aa24.56■■□□□ 1.52
RPL23-204ENST00000394333 RB1CC1Q8TDY2 1594 aa23.6■■□□□ 1.37
RPL23-204ENST00000394333 NACADO15069 1562 aa23.57■■□□□ 1.36
RPL23-204ENST00000394333 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
RPL23-204ENST00000394333 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
RPL23-204ENST00000394333 MYO15BQ96JP2 1530 aa23.44■■□□□ 1.34
RPL23-204ENST00000394333 DCAF1Q9Y4B6 1507 aa23.36■■□□□ 1.33
RPL23-204ENST00000394333 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
RPL23-204ENST00000394333 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.26
RPL23-204ENST00000394333 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
RPL23-204ENST00000394333 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
RPL23-204ENST00000394333 SHROOM4Q9ULL8 1493 aa22.64■■□□□ 1.21
RPL23-204ENST00000394333 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
RPL23-204ENST00000394333 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
RPL23-204ENST00000394333 CC2D2AQ9P2K1 1620 aa22.22■■□□□ 1.15
RPL23-204ENST00000394333 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
RPL23-204ENST00000394333 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
RPL23-204ENST00000394333 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
RPL23-204ENST00000394333 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
RPL23-204ENST00000394333 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
RPL23-204ENST00000394333 NCAPD3P42695 1498 aa21.77■■□□□ 1.07
RPL23-204ENST00000394333 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
RPL23-204ENST00000394333 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
RPL23-204ENST00000394333 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
RPL23-204ENST00000394333 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
RPL23-204ENST00000394333 WIZO95785 1651 aa21.56■■□□□ 1.04
RPL23-204ENST00000394333 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
RPL23-204ENST00000394333 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
RPL23-204ENST00000394333 NESP48681 1621 aa21.29■■□□□ 1
RPL23-204ENST00000394333 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
RPL23-204ENST00000394333 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
RPL23-204ENST00000394333 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
RPL23-204ENST00000394333 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
RPL23-204ENST00000394333 CFTRP13569 1480 aa21.02■□□□□ 0.96
RPL23-204ENST00000394333 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.95
RPL23-204ENST00000394333 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
RPL23-204ENST00000394333 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
RPL23-204ENST00000394333 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
RPL23-204ENST00000394333 CUX2O14529 1486 aa20.9■□□□□ 0.94
RPL23-204ENST00000394333 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
RPL23-204ENST00000394333 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
RPL23-204ENST00000394333 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
RPL23-204ENST00000394333 MRC2Q9UBG0 1479 aa20.83■□□□□ 0.93
RPL23-204ENST00000394333 WDR62O43379 1518 aa20.79■□□□□ 0.92
RPL23-204ENST00000394333 URB2Q14146 1524 aaKnown RBP20.72■□□□□ 0.91
RPL23-204ENST00000394333 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
RPL23-204ENST00000394333 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
RPL23-204ENST00000394333 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
RPL23-204ENST00000394333 CUX1P39880 1505 aa20.45■□□□□ 0.86
RPL23-204ENST00000394333 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
RPL23-204ENST00000394333 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
RPL23-204ENST00000394333 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
RPL23-204ENST00000394333 TARBP1Q13395 1621 aaKnown RBP20.37■□□□□ 0.85
RPL23-204ENST00000394333 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
RPL23-204ENST00000394333 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
RPL23-204ENST00000394333 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
RPL23-204ENST00000394333 SYNJ1O43426 1573 aa20.29■□□□□ 0.84
RPL23-204ENST00000394333 SOGA1O94964 1423 aa20.27■□□□□ 0.84
RPL23-204ENST00000394333 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.84
RPL23-204ENST00000394333 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
RPL23-204ENST00000394333 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
RPL23-204ENST00000394333 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.834e-9■■■■□ 24
RPL23-204ENST00000394333 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
RPL23-204ENST00000394333 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
RPL23-204ENST00000394333 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
RPL23-204ENST00000394333 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
RPL23-204ENST00000394333 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
RPL23-204ENST00000394333 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
RPL23-204ENST00000394333 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
RPL23-204ENST00000394333 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
RPL23-204ENST00000394333 PBRM1Q86U86 1689 aa20.04■□□□□ 0.8
RPL23-204ENST00000394333 CHD1O14646 1710 aa20.02■□□□□ 0.79
RPL23-204ENST00000394333 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
RPL23-204ENST00000394333 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
RPL23-204ENST00000394333 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
RPL23-204ENST00000394333 FBLN2P98095 1184 aa19.92■□□□□ 0.78
RPL23-204ENST00000394333 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
RPL23-204ENST00000394333 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
RPL23-204ENST00000394333 CHMP7Q8WUX9 453 aaPredicted RBP19.85■□□□□ 0.77
RPL23-204ENST00000394333 KIF27Q86VH2 1401 aa19.83■□□□□ 0.76
RPL23-204ENST00000394333 CLASP1Q7Z460 1538 aa19.82■□□□□ 0.76
RPL23-204ENST00000394333 GRIN2AQ12879 1464 aa19.82■□□□□ 0.76
RPL23-204ENST00000394333 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
RPL23-204ENST00000394333 IGF1RP08069 1367 aa19.77■□□□□ 0.76
RPL23-204ENST00000394333 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
RPL23-204ENST00000394333 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
RPL23-204ENST00000394333 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
RPL23-204ENST00000394333 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
RPL23-204ENST00000394333 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
RPL23-204ENST00000394333 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
RPL23-204ENST00000394333 NUP160Q12769 1436 aa19.74■□□□□ 0.75
RPL23-204ENST00000394333 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
RPL23-204ENST00000394333 CUL7Q14999 1698 aa19.71■□□□□ 0.75
RPL23-204ENST00000394333 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
RPL23-204ENST00000394333 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
RPL23-204ENST00000394333 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
RPL23-204ENST00000394333 ERCC6L2Q5T890 1561 aa19.58■□□□□ 0.73
RPL23-204ENST00000394333 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms