RNA–Protein interactions for RNA: ENST00000393647.2

AC004884.1-201, humanhuman

BASIC

Gene AC004884.1, Length 319 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004884.1-201ENST00000393647 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.49
AC004884.1-201ENST00000393647 ABCC9O60706 1549 aa27.23■■□□□ 1.95
AC004884.1-201ENST00000393647 CCDC180Q9P1Z9 1646 aa27.18■■□□□ 1.94
AC004884.1-201ENST00000393647 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
AC004884.1-201ENST00000393647 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
AC004884.1-201ENST00000393647 NACADO15069 1562 aa25.71■■□□□ 1.71
AC004884.1-201ENST00000393647 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
AC004884.1-201ENST00000393647 DNAJC5BQ9UF47 199 aa25.48■■□□□ 1.67
AC004884.1-201ENST00000393647 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
AC004884.1-201ENST00000393647 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
AC004884.1-201ENST00000393647 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
AC004884.1-201ENST00000393647 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
AC004884.1-201ENST00000393647 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
AC004884.1-201ENST00000393647 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
AC004884.1-201ENST00000393647 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
AC004884.1-201ENST00000393647 CC2D2AQ9P2K1 1620 aa24.52■■□□□ 1.52
AC004884.1-201ENST00000393647 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
AC004884.1-201ENST00000393647 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
AC004884.1-201ENST00000393647 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
AC004884.1-201ENST00000393647 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
AC004884.1-201ENST00000393647 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
AC004884.1-201ENST00000393647 BAZ1AQ9NRL2 1556 aaPredicted RBP23.66■■□□□ 1.38
AC004884.1-201ENST00000393647 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
AC004884.1-201ENST00000393647 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
AC004884.1-201ENST00000393647 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
AC004884.1-201ENST00000393647 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
AC004884.1-201ENST00000393647 NESP48681 1621 aa23.48■■□□□ 1.35
AC004884.1-201ENST00000393647 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
AC004884.1-201ENST00000393647 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
AC004884.1-201ENST00000393647 WIZO95785 1651 aa23.35■■□□□ 1.33
AC004884.1-201ENST00000393647 RSF1Q96T23 1441 aaPredicted RBP23.22■■□□□ 1.31
AC004884.1-201ENST00000393647 CUX2O14529 1486 aa23.2■■□□□ 1.3
AC004884.1-201ENST00000393647 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
AC004884.1-201ENST00000393647 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
AC004884.1-201ENST00000393647 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
AC004884.1-201ENST00000393647 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
AC004884.1-201ENST00000393647 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
AC004884.1-201ENST00000393647 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
AC004884.1-201ENST00000393647 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
AC004884.1-201ENST00000393647 CFTRP13569 1480 aa22.86■■□□□ 1.25
AC004884.1-201ENST00000393647 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
AC004884.1-201ENST00000393647 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
AC004884.1-201ENST00000393647 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
AC004884.1-201ENST00000393647 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
AC004884.1-201ENST00000393647 WDR62O43379 1518 aa22.75■■□□□ 1.23
AC004884.1-201ENST00000393647 URB2Q14146 1524 aaKnown RBP22.67■■□□□ 1.22
AC004884.1-201ENST00000393647 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.21
AC004884.1-201ENST00000393647 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
AC004884.1-201ENST00000393647 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
AC004884.1-201ENST00000393647 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
AC004884.1-201ENST00000393647 OSCARQ8IYS5 282 aa22.37■■□□□ 1.17
AC004884.1-201ENST00000393647 IFT140Q96RY7 1462 aa22.35■■□□□ 1.17
AC004884.1-201ENST00000393647 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
AC004884.1-201ENST00000393647 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
AC004884.1-201ENST00000393647 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
AC004884.1-201ENST00000393647 AQRO60306 1485 aaKnown RBP eCLIP22.26■■□□□ 1.15
AC004884.1-201ENST00000393647 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
AC004884.1-201ENST00000393647 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
AC004884.1-201ENST00000393647 SOGA1O94964 1423 aa22.19■■□□□ 1.14
AC004884.1-201ENST00000393647 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
AC004884.1-201ENST00000393647 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
AC004884.1-201ENST00000393647 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
AC004884.1-201ENST00000393647 FBLN2P98095 1184 aa22.16■■□□□ 1.14
AC004884.1-201ENST00000393647 CUX1P39880 1505 aa22.16■■□□□ 1.14
AC004884.1-201ENST00000393647 FGD5Q6ZNL6 1462 aa22.14■■□□□ 1.13
AC004884.1-201ENST00000393647 CHD1O14646 1710 aa21.99■■□□□ 1.11
AC004884.1-201ENST00000393647 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
AC004884.1-201ENST00000393647 RIMBP3CA6NJZ7 1639 aa21.95■■□□□ 1.1
AC004884.1-201ENST00000393647 RIMBP3BA6NNM3 1639 aa21.95■■□□□ 1.1
AC004884.1-201ENST00000393647 RIMBP3Q9UFD9 1639 aa21.95■■□□□ 1.1
AC004884.1-201ENST00000393647 SNAPC4Q5SXM2 1469 aa21.95■■□□□ 1.1
AC004884.1-201ENST00000393647 CYB5RLQ6IPT4 315 aa21.91■■□□□ 1.1
AC004884.1-201ENST00000393647 ARHGEF11O15085 1522 aa21.9■■□□□ 1.1
AC004884.1-201ENST00000393647 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
AC004884.1-201ENST00000393647 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
AC004884.1-201ENST00000393647 WRNQ14191 1432 aaPredicted RBP eCLIP21.88■■□□□ 1.09
AC004884.1-201ENST00000393647 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
AC004884.1-201ENST00000393647 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
AC004884.1-201ENST00000393647 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
AC004884.1-201ENST00000393647 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
AC004884.1-201ENST00000393647 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
AC004884.1-201ENST00000393647 SYNJ2O15056 1496 aa21.78■■□□□ 1.08
AC004884.1-201ENST00000393647 PBRM1Q86U86 1689 aa21.78■■□□□ 1.08
AC004884.1-201ENST00000393647 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.07
AC004884.1-201ENST00000393647 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
AC004884.1-201ENST00000393647 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
AC004884.1-201ENST00000393647 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.07
AC004884.1-201ENST00000393647 GRIN2AQ12879 1464 aa21.61■■□□□ 1.05
AC004884.1-201ENST00000393647 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
AC004884.1-201ENST00000393647 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
AC004884.1-201ENST00000393647 ADAMTS12P58397 1594 aa21.58■■□□□ 1.05
AC004884.1-201ENST00000393647 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
AC004884.1-201ENST00000393647 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
AC004884.1-201ENST00000393647 NUP160Q12769 1436 aa21.52■■□□□ 1.04
AC004884.1-201ENST00000393647 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
AC004884.1-201ENST00000393647 IGF1RP08069 1367 aa21.48■■□□□ 1.03
AC004884.1-201ENST00000393647 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
AC004884.1-201ENST00000393647 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
AC004884.1-201ENST00000393647 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
AC004884.1-201ENST00000393647 SHROOM2Q13796 1616 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms