RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
LAMB1-203ENST00000393560 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.9
LAMB1-203ENST00000393560 MYT1Q01538 1121 aa20.26■□□□□ 0.83
LAMB1-203ENST00000393560 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
LAMB1-203ENST00000393560 PRKCSHP14314 528 aaPredicted RBP19.4■□□□□ 0.7
LAMB1-203ENST00000393560 HRCP23327 699 aa19.15■□□□□ 0.66
LAMB1-203ENST00000393560 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
LAMB1-203ENST00000393560 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
LAMB1-203ENST00000393560 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.6
LAMB1-203ENST00000393560 SLC24A1O60721 1099 aa18.79■□□□□ 0.6
LAMB1-203ENST00000393560 ERICH6Q7L0X2 663 aa18.78■□□□□ 0.6
LAMB1-203ENST00000393560 APLP2Q06481 763 aa18.73■□□□□ 0.59
LAMB1-203ENST00000393560 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
LAMB1-203ENST00000393560 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
LAMB1-203ENST00000393560 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
LAMB1-203ENST00000393560 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
LAMB1-203ENST00000393560 SHROOM4Q9ULL8 1493 aa18.05■□□□□ 0.48
LAMB1-203ENST00000393560 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
LAMB1-203ENST00000393560 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
LAMB1-203ENST00000393560 DCAF8L2P0C7V8 631 aa17.98■□□□□ 0.47
LAMB1-203ENST00000393560 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
LAMB1-203ENST00000393560 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
LAMB1-203ENST00000393560 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
LAMB1-203ENST00000393560 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
LAMB1-203ENST00000393560 DAXXQ9UER7 740 aaPredicted RBP17.83■□□□□ 0.45
LAMB1-203ENST00000393560 EIF5BO60841 1220 aaKnown RBP17.79■□□□□ 0.44
LAMB1-203ENST00000393560 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
LAMB1-203ENST00000393560 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
LAMB1-203ENST00000393560 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
LAMB1-203ENST00000393560 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
LAMB1-203ENST00000393560 UBE2Q2Q8WVN8 375 aa17.42■□□□□ 0.38
LAMB1-203ENST00000393560 ABCC9O60706 1549 aa17.4■□□□□ 0.38
LAMB1-203ENST00000393560 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
LAMB1-203ENST00000393560 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.36
LAMB1-203ENST00000393560 CCDC136Q96JN2 1154 aa17.23■□□□□ 0.35
LAMB1-203ENST00000393560 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
LAMB1-203ENST00000393560 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
LAMB1-203ENST00000393560 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
LAMB1-203ENST00000393560 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
LAMB1-203ENST00000393560 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
LAMB1-203ENST00000393560 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
LAMB1-203ENST00000393560 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
LAMB1-203ENST00000393560 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.32
LAMB1-203ENST00000393560 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
LAMB1-203ENST00000393560 NACADO15069 1562 aa16.96■□□□□ 0.3
LAMB1-203ENST00000393560 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
LAMB1-203ENST00000393560 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
LAMB1-203ENST00000393560 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
LAMB1-203ENST00000393560 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
LAMB1-203ENST00000393560 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
LAMB1-203ENST00000393560 DEKP35659 375 aaKnown RBP16.74■□□□□ 0.27
LAMB1-203ENST00000393560 ERICH6BQ5W0A0 696 aa16.74■□□□□ 0.27
LAMB1-203ENST00000393560 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
LAMB1-203ENST00000393560 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
LAMB1-203ENST00000393560 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
LAMB1-203ENST00000393560 PABPN1Q86U42 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
LAMB1-203ENST00000393560 MSH5O43196 834 aa16.57■□□□□ 0.24
LAMB1-203ENST00000393560 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
LAMB1-203ENST00000393560 NEFLP07196 543 aa16.56■□□□□ 0.24
LAMB1-203ENST00000393560 MYT1LQ9UL68 1186 aa16.56■□□□□ 0.24
LAMB1-203ENST00000393560 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
LAMB1-203ENST00000393560 PDE4CQ08493 712 aa16.54■□□□□ 0.24
LAMB1-203ENST00000393560 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
LAMB1-203ENST00000393560 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
LAMB1-203ENST00000393560 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
LAMB1-203ENST00000393560 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
LAMB1-203ENST00000393560 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
LAMB1-203ENST00000393560 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
LAMB1-203ENST00000393560 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
LAMB1-203ENST00000393560 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
LAMB1-203ENST00000393560 WIZO95785 1651 aa16.4■□□□□ 0.22
LAMB1-203ENST00000393560 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
LAMB1-203ENST00000393560 MIER1Q8N108 512 aa16.39■□□□□ 0.21
LAMB1-203ENST00000393560 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
LAMB1-203ENST00000393560 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
LAMB1-203ENST00000393560 FGD1P98174 961 aa16.37■□□□□ 0.21
LAMB1-203ENST00000393560 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
LAMB1-203ENST00000393560 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
LAMB1-203ENST00000393560 BCANQ96GW7 911 aa16.32■□□□□ 0.2
LAMB1-203ENST00000393560 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
LAMB1-203ENST00000393560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
LAMB1-203ENST00000393560 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
LAMB1-203ENST00000393560 TIMELESSQ9UNS1 1208 aa16.27■□□□□ 0.2
LAMB1-203ENST00000393560 RANGAP1P46060 587 aaPredicted RBP16.26■□□□□ 0.19
LAMB1-203ENST00000393560 GLIPR1L2Q4G1C9 344 aa16.26■□□□□ 0.19
LAMB1-203ENST00000393560 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
LAMB1-203ENST00000393560 AAMPQ13685 434 aa16.24■□□□□ 0.19
LAMB1-203ENST00000393560 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
LAMB1-203ENST00000393560 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
LAMB1-203ENST00000393560 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
LAMB1-203ENST00000393560 NBR1Q14596 966 aa16.18■□□□□ 0.18
LAMB1-203ENST00000393560 ARXQ96QS3 562 aa16.17■□□□□ 0.18
LAMB1-203ENST00000393560 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
LAMB1-203ENST00000393560 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
LAMB1-203ENST00000393560 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
LAMB1-203ENST00000393560 TAF7LQ5H9L4 462 aa16.05■□□□□ 0.16
LAMB1-203ENST00000393560 ITGAEP38570 1179 aa16.04■□□□□ 0.16
LAMB1-203ENST00000393560 FKBP8Q14318 412 aa16.04■□□□□ 0.16
LAMB1-203ENST00000393560 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
LAMB1-203ENST00000393560 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms