RNA–Protein interactions for RNA: ENST00000393088.8

SERPINA1-203, Transcript of serpin family A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERPINA1, Length 1,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-203ENST00000393088 NISCHQ9Y2I1 1504 aa28.62■■■□□ 2.17
SERPINA1-203ENST00000393088 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
SERPINA1-203ENST00000393088 ABCC9O60706 1549 aa24.87■■□□□ 1.57
SERPINA1-203ENST00000393088 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
SERPINA1-203ENST00000393088 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
SERPINA1-203ENST00000393088 RB1CC1Q8TDY2 1594 aa23.8■■□□□ 1.4
SERPINA1-203ENST00000393088 NACADO15069 1562 aa23.76■■□□□ 1.39
SERPINA1-203ENST00000393088 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
SERPINA1-203ENST00000393088 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
SERPINA1-203ENST00000393088 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
SERPINA1-203ENST00000393088 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
SERPINA1-203ENST00000393088 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
SERPINA1-203ENST00000393088 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
SERPINA1-203ENST00000393088 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
SERPINA1-203ENST00000393088 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
SERPINA1-203ENST00000393088 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
SERPINA1-203ENST00000393088 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
SERPINA1-203ENST00000393088 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.17
SERPINA1-203ENST00000393088 SMARCA4P51532 1647 aa22.15■■□□□ 1.14
SERPINA1-203ENST00000393088 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
SERPINA1-203ENST00000393088 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
SERPINA1-203ENST00000393088 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
SERPINA1-203ENST00000393088 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
SERPINA1-203ENST00000393088 NCAPD3P42695 1498 aa21.95■■□□□ 1.11
SERPINA1-203ENST00000393088 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
SERPINA1-203ENST00000393088 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
SERPINA1-203ENST00000393088 WIZO95785 1651 aa21.91■■□□□ 1.1
SERPINA1-203ENST00000393088 PEG3Q9GZU2 1588 aa21.88■■□□□ 1.09
SERPINA1-203ENST00000393088 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
SERPINA1-203ENST00000393088 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
SERPINA1-203ENST00000393088 TOP2AP11388 1531 aaKnown RBP21.66■■□□□ 1.06
SERPINA1-203ENST00000393088 NESP48681 1621 aa21.58■■□□□ 1.04
SERPINA1-203ENST00000393088 CCDC88BA6NC98 1476 aa21.41■■□□□ 1.02
SERPINA1-203ENST00000393088 LAMC3Q9Y6N6 1575 aa21.36■■□□□ 1.01
SERPINA1-203ENST00000393088 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
SERPINA1-203ENST00000393088 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
SERPINA1-203ENST00000393088 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
SERPINA1-203ENST00000393088 CFTRP13569 1480 aa21.21■□□□□ 0.99
SERPINA1-203ENST00000393088 PDS5BQ9NTI5 1447 aa21.18■□□□□ 0.98
SERPINA1-203ENST00000393088 THOC2Q8NI27 1593 aaKnown RBP21.18■□□□□ 0.98
SERPINA1-203ENST00000393088 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
SERPINA1-203ENST00000393088 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
SERPINA1-203ENST00000393088 CUX2O14529 1486 aa21.06■□□□□ 0.96
SERPINA1-203ENST00000393088 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
SERPINA1-203ENST00000393088 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
SERPINA1-203ENST00000393088 WDR62O43379 1518 aa20.97■□□□□ 0.95
SERPINA1-203ENST00000393088 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
SERPINA1-203ENST00000393088 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
SERPINA1-203ENST00000393088 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
SERPINA1-203ENST00000393088 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
SERPINA1-203ENST00000393088 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
SERPINA1-203ENST00000393088 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
SERPINA1-203ENST00000393088 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
SERPINA1-203ENST00000393088 CUX1P39880 1505 aa20.68■□□□□ 0.9
SERPINA1-203ENST00000393088 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
SERPINA1-203ENST00000393088 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
SERPINA1-203ENST00000393088 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
SERPINA1-203ENST00000393088 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
SERPINA1-203ENST00000393088 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
SERPINA1-203ENST00000393088 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
SERPINA1-203ENST00000393088 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
SERPINA1-203ENST00000393088 IFT140Q96RY7 1462 aa20.58■□□□□ 0.88
SERPINA1-203ENST00000393088 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
SERPINA1-203ENST00000393088 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
SERPINA1-203ENST00000393088 SOGA1O94964 1423 aa20.5■□□□□ 0.87
SERPINA1-203ENST00000393088 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.871e-14■■■■□ 19.5
SERPINA1-203ENST00000393088 DNAJC5Q9H3Z4 198 aa20.47■□□□□ 0.87
SERPINA1-203ENST00000393088 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
SERPINA1-203ENST00000393088 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
SERPINA1-203ENST00000393088 ABCA10Q8WWZ4 1543 aa20.33■□□□□ 0.85
SERPINA1-203ENST00000393088 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
SERPINA1-203ENST00000393088 ABCA5Q8WWZ7 1642 aa20.29■□□□□ 0.84
SERPINA1-203ENST00000393088 SNAPC4Q5SXM2 1469 aa20.27■□□□□ 0.83
SERPINA1-203ENST00000393088 CHD1O14646 1710 aa20.27■□□□□ 0.83
SERPINA1-203ENST00000393088 GAPVD1Q14C86 1478 aa20.26■□□□□ 0.83
SERPINA1-203ENST00000393088 KIF27Q86VH2 1401 aa20.26■□□□□ 0.83
SERPINA1-203ENST00000393088 PBRM1Q86U86 1689 aa20.26■□□□□ 0.83
SERPINA1-203ENST00000393088 EEA1Q15075 1411 aa20.25■□□□□ 0.83
SERPINA1-203ENST00000393088 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
SERPINA1-203ENST00000393088 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
SERPINA1-203ENST00000393088 OSCARQ8IYS5 282 aa20.21■□□□□ 0.83
SERPINA1-203ENST00000393088 FBLN2P98095 1184 aa20.2■□□□□ 0.82
SERPINA1-203ENST00000393088 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
SERPINA1-203ENST00000393088 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
SERPINA1-203ENST00000393088 IGF1RP08069 1367 aa20.11■□□□□ 0.81
SERPINA1-203ENST00000393088 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
SERPINA1-203ENST00000393088 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
SERPINA1-203ENST00000393088 CHMP7Q8WUX9 453 aaPredicted RBP20.09■□□□□ 0.81
SERPINA1-203ENST00000393088 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
SERPINA1-203ENST00000393088 CUL7Q14999 1698 aa20.05■□□□□ 0.8
SERPINA1-203ENST00000393088 KIF21BO75037 1637 aa20.04■□□□□ 0.8
SERPINA1-203ENST00000393088 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
SERPINA1-203ENST00000393088 CLASP1Q7Z460 1538 aa20.01■□□□□ 0.79
SERPINA1-203ENST00000393088 GRIN2AQ12879 1464 aa20■□□□□ 0.79
SERPINA1-203ENST00000393088 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
SERPINA1-203ENST00000393088 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
SERPINA1-203ENST00000393088 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
SERPINA1-203ENST00000393088 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
SERPINA1-203ENST00000393088 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
SERPINA1-203ENST00000393088 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms