RNA–Protein interactions for RNA: ENST00000393087.8

SERPINA1-202, Transcript of serpin family A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERPINA1, Length 1,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-202ENST00000393087 NISCHQ9Y2I1 1504 aa27.28■■□□□ 1.96
SERPINA1-202ENST00000393087 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
SERPINA1-202ENST00000393087 ABCC9O60706 1549 aa23.25■■□□□ 1.31
SERPINA1-202ENST00000393087 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
SERPINA1-202ENST00000393087 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
SERPINA1-202ENST00000393087 DCAF1Q9Y4B6 1507 aa22.55■■□□□ 1.2
SERPINA1-202ENST00000393087 NACADO15069 1562 aa22.54■■□□□ 1.2
SERPINA1-202ENST00000393087 MYO15BQ96JP2 1530 aa22.5■■□□□ 1.19
SERPINA1-202ENST00000393087 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
SERPINA1-202ENST00000393087 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
SERPINA1-202ENST00000393087 UNC13AQ9UPW8 1703 aa22.01■■□□□ 1.11
SERPINA1-202ENST00000393087 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
SERPINA1-202ENST00000393087 BICRAQ9NZM4 1560 aa21.81■■□□□ 1.08
SERPINA1-202ENST00000393087 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
SERPINA1-202ENST00000393087 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
SERPINA1-202ENST00000393087 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
SERPINA1-202ENST00000393087 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
SERPINA1-202ENST00000393087 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
SERPINA1-202ENST00000393087 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
SERPINA1-202ENST00000393087 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
SERPINA1-202ENST00000393087 DNAJC5BQ9UF47 199 aa21.02■□□□□ 0.96
SERPINA1-202ENST00000393087 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
SERPINA1-202ENST00000393087 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
SERPINA1-202ENST00000393087 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
SERPINA1-202ENST00000393087 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
SERPINA1-202ENST00000393087 WIZO95785 1651 aa20.85■□□□□ 0.93
SERPINA1-202ENST00000393087 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
SERPINA1-202ENST00000393087 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
SERPINA1-202ENST00000393087 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
SERPINA1-202ENST00000393087 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
SERPINA1-202ENST00000393087 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
SERPINA1-202ENST00000393087 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.86
SERPINA1-202ENST00000393087 NESP48681 1621 aa20.23■□□□□ 0.83
SERPINA1-202ENST00000393087 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
SERPINA1-202ENST00000393087 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
SERPINA1-202ENST00000393087 CFTRP13569 1480 aa20.18■□□□□ 0.82
SERPINA1-202ENST00000393087 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
SERPINA1-202ENST00000393087 PDS5BQ9NTI5 1447 aa20.05■□□□□ 0.8
SERPINA1-202ENST00000393087 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
SERPINA1-202ENST00000393087 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
SERPINA1-202ENST00000393087 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
SERPINA1-202ENST00000393087 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
SERPINA1-202ENST00000393087 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
SERPINA1-202ENST00000393087 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
SERPINA1-202ENST00000393087 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
SERPINA1-202ENST00000393087 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
SERPINA1-202ENST00000393087 WDR62O43379 1518 aa19.74■□□□□ 0.75
SERPINA1-202ENST00000393087 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
SERPINA1-202ENST00000393087 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
SERPINA1-202ENST00000393087 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
SERPINA1-202ENST00000393087 CUX1P39880 1505 aa19.71■□□□□ 0.75
SERPINA1-202ENST00000393087 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
SERPINA1-202ENST00000393087 TOP2BQ02880 1626 aa19.63■□□□□ 0.73
SERPINA1-202ENST00000393087 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
SERPINA1-202ENST00000393087 CUX2O14529 1486 aa19.61■□□□□ 0.73
SERPINA1-202ENST00000393087 FGD5Q6ZNL6 1462 aa19.59■□□□□ 0.73
SERPINA1-202ENST00000393087 POLA1P09884 1462 aaPredicted RBP19.58■□□□□ 0.73
SERPINA1-202ENST00000393087 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
SERPINA1-202ENST00000393087 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
SERPINA1-202ENST00000393087 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
SERPINA1-202ENST00000393087 SOGA1O94964 1423 aa19.51■□□□□ 0.71
SERPINA1-202ENST00000393087 IFT140Q96RY7 1462 aa19.49■□□□□ 0.71
SERPINA1-202ENST00000393087 TARBP1Q13395 1621 aaKnown RBP19.48■□□□□ 0.71
SERPINA1-202ENST00000393087 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
SERPINA1-202ENST00000393087 ABCA10Q8WWZ4 1543 aa19.4■□□□□ 0.7
SERPINA1-202ENST00000393087 ZNF608Q9ULD9 1512 aaPredicted RBP19.4■□□□□ 0.7
SERPINA1-202ENST00000393087 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
SERPINA1-202ENST00000393087 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.691e-14■■■■□ 19.5
SERPINA1-202ENST00000393087 EIF4G3O43432 1585 aaKnown RBP19.33■□□□□ 0.68
SERPINA1-202ENST00000393087 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
SERPINA1-202ENST00000393087 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
SERPINA1-202ENST00000393087 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
SERPINA1-202ENST00000393087 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
SERPINA1-202ENST00000393087 GRIN2BQ13224 1484 aa19.23■□□□□ 0.67
SERPINA1-202ENST00000393087 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
SERPINA1-202ENST00000393087 ERICH3Q5RHP9 1530 aa19.17■□□□□ 0.66
SERPINA1-202ENST00000393087 IGF1RP08069 1367 aa19.16■□□□□ 0.66
SERPINA1-202ENST00000393087 FAM9AQ8IZU1 332 aaPredicted RBP19.16■□□□□ 0.66
SERPINA1-202ENST00000393087 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
SERPINA1-202ENST00000393087 EEA1Q15075 1411 aa19.14■□□□□ 0.65
SERPINA1-202ENST00000393087 MAGI1Q96QZ7 1491 aaPredicted RBP19.13■□□□□ 0.65
SERPINA1-202ENST00000393087 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
SERPINA1-202ENST00000393087 ADAMTS12P58397 1594 aa19.08■□□□□ 0.65
SERPINA1-202ENST00000393087 CUL7Q14999 1698 aa19.07■□□□□ 0.64
SERPINA1-202ENST00000393087 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
SERPINA1-202ENST00000393087 FBLN2P98095 1184 aa19.07■□□□□ 0.64
SERPINA1-202ENST00000393087 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
SERPINA1-202ENST00000393087 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
SERPINA1-202ENST00000393087 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
SERPINA1-202ENST00000393087 CHD1O14646 1710 aa19.02■□□□□ 0.64
SERPINA1-202ENST00000393087 PRXQ9BXM0 1461 aa19■□□□□ 0.63
SERPINA1-202ENST00000393087 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
SERPINA1-202ENST00000393087 RAPGEF2Q9Y4G8 1499 aa18.98■□□□□ 0.63
SERPINA1-202ENST00000393087 KIF21BO75037 1637 aa18.92■□□□□ 0.62
SERPINA1-202ENST00000393087 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
SERPINA1-202ENST00000393087 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
SERPINA1-202ENST00000393087 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
SERPINA1-202ENST00000393087 NUP160Q12769 1436 aa18.87■□□□□ 0.61
SERPINA1-202ENST00000393087 GOLGA3Q08378 1498 aa18.85■□□□□ 0.61
SERPINA1-202ENST00000393087 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms