RNA–Protein interactions for RNA: ENST00000392169.6

SDHC-203, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-203ENST00000392169 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
SDHC-203ENST00000392169 CCDC180Q9P1Z9 1646 aa14.79□□□□□ -0.04
SDHC-203ENST00000392169 ABCC9O60706 1549 aa14.71□□□□□ -0.05
SDHC-203ENST00000392169 DCAF8L2P0C7V8 631 aa14.05□□□□□ -0.16
SDHC-203ENST00000392169 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
SDHC-203ENST00000392169 NACADO15069 1562 aa13.98□□□□□ -0.17
SDHC-203ENST00000392169 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
SDHC-203ENST00000392169 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
SDHC-203ENST00000392169 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
SDHC-203ENST00000392169 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
SDHC-203ENST00000392169 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
SDHC-203ENST00000392169 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
SDHC-203ENST00000392169 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
SDHC-203ENST00000392169 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
SDHC-203ENST00000392169 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
SDHC-203ENST00000392169 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
SDHC-203ENST00000392169 CC2D2AQ9P2K1 1620 aa13.28□□□□□ -0.28
SDHC-203ENST00000392169 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
SDHC-203ENST00000392169 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
SDHC-203ENST00000392169 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
SDHC-203ENST00000392169 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
SDHC-203ENST00000392169 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
SDHC-203ENST00000392169 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
SDHC-203ENST00000392169 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
SDHC-203ENST00000392169 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
SDHC-203ENST00000392169 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
SDHC-203ENST00000392169 PEG3Q9GZU2 1588 aa12.76□□□□□ -0.37
SDHC-203ENST00000392169 ERCC6Q03468 1493 aa12.71□□□□□ -0.38
SDHC-203ENST00000392169 NESP48681 1621 aa12.68□□□□□ -0.38
SDHC-203ENST00000392169 WIZO95785 1651 aa12.64□□□□□ -0.39
SDHC-203ENST00000392169 CUX2O14529 1486 aa12.59□□□□□ -0.39
SDHC-203ENST00000392169 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
SDHC-203ENST00000392169 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
SDHC-203ENST00000392169 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
SDHC-203ENST00000392169 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
SDHC-203ENST00000392169 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
SDHC-203ENST00000392169 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
SDHC-203ENST00000392169 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
SDHC-203ENST00000392169 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
SDHC-203ENST00000392169 CFTRP13569 1480 aa12.42□□□□□ -0.42
SDHC-203ENST00000392169 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.42
SDHC-203ENST00000392169 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.43
SDHC-203ENST00000392169 CEP164Q9UPV0 1460 aa12.39□□□□□ -0.43
SDHC-203ENST00000392169 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
SDHC-203ENST00000392169 WDR62O43379 1518 aa12.36□□□□□ -0.43
SDHC-203ENST00000392169 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.44
SDHC-203ENST00000392169 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
SDHC-203ENST00000392169 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
SDHC-203ENST00000392169 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
SDHC-203ENST00000392169 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
SDHC-203ENST00000392169 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
SDHC-203ENST00000392169 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
SDHC-203ENST00000392169 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
SDHC-203ENST00000392169 OSCARQ8IYS5 282 aa12.11□□□□□ -0.47
SDHC-203ENST00000392169 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
SDHC-203ENST00000392169 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
SDHC-203ENST00000392169 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.48
SDHC-203ENST00000392169 SOGA1O94964 1423 aa12.03□□□□□ -0.48
SDHC-203ENST00000392169 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.48
SDHC-203ENST00000392169 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.49
SDHC-203ENST00000392169 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
SDHC-203ENST00000392169 CUX1P39880 1505 aa12.01□□□□□ -0.49
SDHC-203ENST00000392169 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
SDHC-203ENST00000392169 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
SDHC-203ENST00000392169 FBLN2P98095 1184 aa11.97□□□□□ -0.49
SDHC-203ENST00000392169 CHD1O14646 1710 aa11.91□□□□□ -0.5
SDHC-203ENST00000392169 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
SDHC-203ENST00000392169 CHMP7Q8WUX9 453 aaPredicted RBP11.9□□□□□ -0.5
SDHC-203ENST00000392169 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
SDHC-203ENST00000392169 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
SDHC-203ENST00000392169 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
SDHC-203ENST00000392169 GAPVD1Q14C86 1478 aa11.88□□□□□ -0.51
SDHC-203ENST00000392169 RIMBP3CA6NJZ7 1639 aa11.87□□□□□ -0.51
SDHC-203ENST00000392169 RIMBP3BA6NNM3 1639 aa11.87□□□□□ -0.51
SDHC-203ENST00000392169 RIMBP3Q9UFD9 1639 aa11.87□□□□□ -0.51
SDHC-203ENST00000392169 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
SDHC-203ENST00000392169 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
SDHC-203ENST00000392169 MAGI1Q96QZ7 1491 aaPredicted RBP11.86□□□□□ -0.51
SDHC-203ENST00000392169 TOP2BQ02880 1626 aa11.85□□□□□ -0.51
SDHC-203ENST00000392169 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
SDHC-203ENST00000392169 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
SDHC-203ENST00000392169 CYB5RLQ6IPT4 315 aa11.83□□□□□ -0.52
SDHC-203ENST00000392169 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
SDHC-203ENST00000392169 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
SDHC-203ENST00000392169 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
SDHC-203ENST00000392169 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
SDHC-203ENST00000392169 ARAP1Q96P48 1450 aa11.75□□□□□ -0.53
SDHC-203ENST00000392169 GRIN2AQ12879 1464 aa11.73□□□□□ -0.53
SDHC-203ENST00000392169 FHAD1B1AJZ9 1412 aa11.72□□□□□ -0.53
SDHC-203ENST00000392169 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
SDHC-203ENST00000392169 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.53
SDHC-203ENST00000392169 NUP160Q12769 1436 aa11.68□□□□□ -0.54
SDHC-203ENST00000392169 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
SDHC-203ENST00000392169 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
SDHC-203ENST00000392169 KIF27Q86VH2 1401 aa11.65□□□□□ -0.54
SDHC-203ENST00000392169 IGF1RP08069 1367 aa11.64□□□□□ -0.55
SDHC-203ENST00000392169 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
SDHC-203ENST00000392169 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
SDHC-203ENST00000392169 SHROOM2Q13796 1616 aa11.58□□□□□ -0.56
SDHC-203ENST00000392169 PRG4Q92954 1404 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms