RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
VIL1-202ENST00000392114 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
VIL1-202ENST00000392114 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
VIL1-202ENST00000392114 DCAF1Q9Y4B6 1507 aa22.76■■□□□ 1.23
VIL1-202ENST00000392114 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
VIL1-202ENST00000392114 ABCC9O60706 1549 aa22.66■■□□□ 1.22
VIL1-202ENST00000392114 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
VIL1-202ENST00000392114 NACADO15069 1562 aa22.41■■□□□ 1.18
VIL1-202ENST00000392114 RB1CC1Q8TDY2 1594 aa22.23■■□□□ 1.15
VIL1-202ENST00000392114 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
VIL1-202ENST00000392114 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
VIL1-202ENST00000392114 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
VIL1-202ENST00000392114 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
VIL1-202ENST00000392114 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.02
VIL1-202ENST00000392114 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.013e-7■■□□□ 13
VIL1-202ENST00000392114 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
VIL1-202ENST00000392114 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
VIL1-202ENST00000392114 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
VIL1-202ENST00000392114 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
VIL1-202ENST00000392114 SMARCA4P51532 1647 aa21.1■□□□□ 0.97
VIL1-202ENST00000392114 WIZO95785 1651 aa20.96■□□□□ 0.95
VIL1-202ENST00000392114 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
VIL1-202ENST00000392114 EIF4G1Q04637 1599 aaKnown RBP20.84■□□□□ 0.93
VIL1-202ENST00000392114 SMARCA2P51531 1590 aa20.83■□□□□ 0.93
VIL1-202ENST00000392114 TOP2AP11388 1531 aaKnown RBP20.8■□□□□ 0.92
VIL1-202ENST00000392114 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
VIL1-202ENST00000392114 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
VIL1-202ENST00000392114 NCAPD3P42695 1498 aa20.64■□□□□ 0.89
VIL1-202ENST00000392114 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
VIL1-202ENST00000392114 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
VIL1-202ENST00000392114 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
VIL1-202ENST00000392114 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
VIL1-202ENST00000392114 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
VIL1-202ENST00000392114 CFTRP13569 1480 aa20.14■□□□□ 0.81
VIL1-202ENST00000392114 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
VIL1-202ENST00000392114 CADPSQ9ULU8 1353 aa20.1■□□□□ 0.81
VIL1-202ENST00000392114 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
VIL1-202ENST00000392114 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
VIL1-202ENST00000392114 LAMC3Q9Y6N6 1575 aa19.98■□□□□ 0.79
VIL1-202ENST00000392114 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
VIL1-202ENST00000392114 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
VIL1-202ENST00000392114 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
VIL1-202ENST00000392114 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
VIL1-202ENST00000392114 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
VIL1-202ENST00000392114 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
VIL1-202ENST00000392114 NESP48681 1621 aa19.83■□□□□ 0.77
VIL1-202ENST00000392114 EEA1Q15075 1411 aa19.78■□□□□ 0.76
VIL1-202ENST00000392114 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.75
VIL1-202ENST00000392114 CUX1P39880 1505 aa19.77■□□□□ 0.75
VIL1-202ENST00000392114 FAM9AQ8IZU1 332 aaPredicted RBP19.72■□□□□ 0.75
VIL1-202ENST00000392114 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
VIL1-202ENST00000392114 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
VIL1-202ENST00000392114 SOGA1O94964 1423 aa19.65■□□□□ 0.74
VIL1-202ENST00000392114 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
VIL1-202ENST00000392114 CSRNP3Q8WYN3 585 aa19.62■□□□□ 0.73
VIL1-202ENST00000392114 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
VIL1-202ENST00000392114 FGD5Q6ZNL6 1462 aa19.59■□□□□ 0.73
VIL1-202ENST00000392114 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
VIL1-202ENST00000392114 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
VIL1-202ENST00000392114 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
VIL1-202ENST00000392114 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
VIL1-202ENST00000392114 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
VIL1-202ENST00000392114 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
VIL1-202ENST00000392114 CUX2O14529 1486 aa19.46■□□□□ 0.71
VIL1-202ENST00000392114 KIF21BO75037 1637 aa19.46■□□□□ 0.71
VIL1-202ENST00000392114 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
VIL1-202ENST00000392114 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
VIL1-202ENST00000392114 WDR62O43379 1518 aa19.43■□□□□ 0.7
VIL1-202ENST00000392114 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
VIL1-202ENST00000392114 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
VIL1-202ENST00000392114 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
VIL1-202ENST00000392114 UBTFP17480 764 aaKnown RBP19.36■□□□□ 0.69
VIL1-202ENST00000392114 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
VIL1-202ENST00000392114 TNIKQ9UKE5 1360 aa19.36■□□□□ 0.69
VIL1-202ENST00000392114 THOC2Q8NI27 1593 aaKnown RBP19.35■□□□□ 0.69
VIL1-202ENST00000392114 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
VIL1-202ENST00000392114 IGF1RP08069 1367 aa19.33■□□□□ 0.68
VIL1-202ENST00000392114 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
VIL1-202ENST00000392114 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
VIL1-202ENST00000392114 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
VIL1-202ENST00000392114 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.68
VIL1-202ENST00000392114 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.68
VIL1-202ENST00000392114 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
VIL1-202ENST00000392114 CUL7Q14999 1698 aa19.26■□□□□ 0.67
VIL1-202ENST00000392114 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
VIL1-202ENST00000392114 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
VIL1-202ENST00000392114 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
VIL1-202ENST00000392114 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
VIL1-202ENST00000392114 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.656e-7■■■□□ 17.3
VIL1-202ENST00000392114 ZNF608Q9ULD9 1512 aaPredicted RBP19.09■□□□□ 0.65
VIL1-202ENST00000392114 CLIP1P30622 1438 aa19.09■□□□□ 0.65
VIL1-202ENST00000392114 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
VIL1-202ENST00000392114 EIF4G3O43432 1585 aaKnown RBP19.08■□□□□ 0.64
VIL1-202ENST00000392114 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
VIL1-202ENST00000392114 CTTNBP2Q8WZ74 1663 aa19.02■□□□□ 0.64
VIL1-202ENST00000392114 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
VIL1-202ENST00000392114 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
VIL1-202ENST00000392114 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
VIL1-202ENST00000392114 VPS8Q8N3P4 1428 aa18.92■□□□□ 0.62
VIL1-202ENST00000392114 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms