RNA–Protein interactions for RNA: ENST00000391297.1

RNU6-279P-201, Transcript of RNA, U6 small nuclear 279, pseudogene, humanhuman

BASIC

Gene RNU6-279P, Length 101 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-279P-201ENST00000391297 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
RNU6-279P-201ENST00000391297 CHIC1Q5VXU3 224 aa12.73□□□□□ -0.37
RNU6-279P-201ENST00000391297 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
RNU6-279P-201ENST00000391297 SENP3Q9H4L4 574 aaPredicted RBP11.8□□□□□ -0.52
RNU6-279P-201ENST00000391297 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
RNU6-279P-201ENST00000391297 FOXD1Q16676 465 aa11.18□□□□□ -0.62
RNU6-279P-201ENST00000391297 MSH5O43196 834 aa10.79□□□□□ -0.68
RNU6-279P-201ENST00000391297 PIAS4Q8N2W9 510 aaPredicted RBP10.21□□□□□ -0.77
RNU6-279P-201ENST00000391297 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
RNU6-279P-201ENST00000391297 PPP6R1Q9UPN7 881 aa9.7□□□□□ -0.86
RNU6-279P-201ENST00000391297 ADRA2BP18089 450 aa9.61□□□□□ -0.87
RNU6-279P-201ENST00000391297 POTEHQ6S545 545 aa9.47□□□□□ -0.89
RNU6-279P-201ENST00000391297 DMRT2Q9Y5R5 561 aa9.21□□□□□ -0.94
RNU6-279P-201ENST00000391297 MAPK8IP2Q13387 824 aaPredicted RBP9.15□□□□□ -0.94
RNU6-279P-201ENST00000391297 RNF39Q9H2S5 420 aa9.14□□□□□ -0.95
RNU6-279P-201ENST00000391297 PLPPR3Q6T4P5 718 aa9.1□□□□□ -0.95
RNU6-279P-201ENST00000391297 DCAF8L1A6NGE4 600 aa8.98□□□□□ -0.97
RNU6-279P-201ENST00000391297 C1QBPQ07021 282 aaKnown RBP8.91□□□□□ -0.98
RNU6-279P-201ENST00000391297 SCAF1Q9H7N4 1312 aaKnown RBP8.68□□□□□ -1.02
RNU6-279P-201ENST00000391297 HOXD11P31277 338 aaPredicted RBP8.45□□□□□ -1.06
RNU6-279P-201ENST00000391297 SP7Q8TDD2 431 aaPredicted RBP8.38□□□□□ -1.07
RNU6-279P-201ENST00000391297 PLSCR2Q9NRY7 297 aa8.3□□□□□ -1.08
RNU6-279P-201ENST00000391297 DNAJC5BQ9UF47 199 aa8.27□□□□□ -1.09
RNU6-279P-201ENST00000391297 DSG3P32926 999 aa8.24□□□□□ -1.09
RNU6-279P-201ENST00000391297 CHRDL2Q6WN34 429 aa8.12□□□□□ -1.11
RNU6-279P-201ENST00000391297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.1□□□□□ -1.11
RNU6-279P-201ENST00000391297 RNF216Q9NWF9 866 aaPredicted RBP8.1□□□□□ -1.11
RNU6-279P-201ENST00000391297 CAPN15O75808 1086 aa8.07□□□□□ -1.12
RNU6-279P-201ENST00000391297 SPINK5Q9NQ38 1064 aaPredicted RBP8.05□□□□□ -1.12
RNU6-279P-201ENST00000391297 CNKSR2Q8WXI2 1034 aa7.92□□□□□ -1.14
RNU6-279P-201ENST00000391297 PPP4R3CPQ6ZMV5 832 aa7.88□□□□□ -1.15
RNU6-279P-201ENST00000391297 HAX1O00165 279 aa7.86□□□□□ -1.15
RNU6-279P-201ENST00000391297 LHX8Q68G74 356 aa7.86□□□□□ -1.15
RNU6-279P-201ENST00000391297 ABCB7O75027 752 aa7.83□□□□□ -1.16
RNU6-279P-201ENST00000391297 RBM42Q9BTD8 480 aaKnown RBP7.83□□□□□ -1.16
RNU6-279P-201ENST00000391297 U3KPZ7 1027 aaPredicted RBP7.82□□□□□ -1.16
RNU6-279P-201ENST00000391297 EVX2Q03828 476 aa7.73□□□□□ -1.17
RNU6-279P-201ENST00000391297 PIP4P2Q8N4L2 257 aa7.72□□□□□ -1.17
RNU6-279P-201ENST00000391297 TRHP20396 242 aaPredicted RBP7.71□□□□□ -1.18
RNU6-279P-201ENST00000391297 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
RNU6-279P-201ENST00000391297 POTEMA6NI47 508 aa7.48□□□□□ -1.21
RNU6-279P-201ENST00000391297 FXR2P51116 673 aaKnown RBP eCLIP7.46□□□□□ -1.22
RNU6-279P-201ENST00000391297 GABBR2O75899 941 aa7.45□□□□□ -1.22
RNU6-279P-201ENST00000391297 AKT1S1Q96B36 256 aa7.44□□□□□ -1.22
RNU6-279P-201ENST00000391297 POTEGQ6S5H5 508 aa7.42□□□□□ -1.22
RNU6-279P-201ENST00000391297 REM2Q8IYK8 340 aaPredicted RBP7.41□□□□□ -1.22
RNU6-279P-201ENST00000391297 APLP2Q06481 763 aa7.38□□□□□ -1.23
RNU6-279P-201ENST00000391297 PITPNM1O00562 1244 aa7.37□□□□□ -1.23
RNU6-279P-201ENST00000391297 POTEIP0CG38 1075 aa7.3□□□□□ -1.24
RNU6-279P-201ENST00000391297 PCDH10Q9P2E7 1040 aa7.28□□□□□ -1.24
RNU6-279P-201ENST00000391297 C19orf67A6NJJ6 358 aa7.27□□□□□ -1.25
RNU6-279P-201ENST00000391297 POLA2Q14181 598 aa7.24□□□□□ -1.25
RNU6-279P-201ENST00000391297 OTUD5Q96G74 571 aa7.22□□□□□ -1.25
RNU6-279P-201ENST00000391297 NCBP3Q53F19 620 aaKnown RBP7.2□□□□□ -1.26
RNU6-279P-201ENST00000391297 NPM3O75607 178 aaKnown RBP7.17□□□□□ -1.26
RNU6-279P-201ENST00000391297 PRKAR2AP13861 404 aaKnown RBP7.17□□□□□ -1.26
RNU6-279P-201ENST00000391297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.15□□□□□ -1.26
RNU6-279P-201ENST00000391297 HNRNPUL2Q1KMD3 747 aaKnown RBP7.15□□□□□ -1.26
RNU6-279P-201ENST00000391297 SLC4A2P04920 1241 aa7.12□□□□□ -1.27
RNU6-279P-201ENST00000391297 SAMD1Q6SPF0 538 aaPredicted RBP7.08□□□□□ -1.28
RNU6-279P-201ENST00000391297 OSCARQ8IYS5 282 aa7.08□□□□□ -1.28
RNU6-279P-201ENST00000391297 POTEB2H3BUK9 544 aa7.06□□□□□ -1.28
RNU6-279P-201ENST00000391297 DCBLD2Q96PD2 775 aa7.03□□□□□ -1.28
RNU6-279P-201ENST00000391297 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
RNU6-279P-201ENST00000391297 FAM163AQ96GL9 167 aaPredicted RBP6.94□□□□□ -1.3
RNU6-279P-201ENST00000391297 CHADLQ6NUI6 762 aa6.92□□□□□ -1.3
RNU6-279P-201ENST00000391297 CLEC11AQ9Y240 323 aa6.92□□□□□ -1.3
RNU6-279P-201ENST00000391297 ZBTB12Q9Y330 459 aaPredicted RBP6.92□□□□□ -1.3
RNU6-279P-201ENST00000391297 CDAN1Q8IWY9 1227 aa6.9□□□□□ -1.3
RNU6-279P-201ENST00000391297 CD44P16070 742 aaKnown RBP6.87□□□□□ -1.31
RNU6-279P-201ENST00000391297 MMRN1Q13201 1228 aa6.85□□□□□ -1.31
RNU6-279P-201ENST00000391297 CLCN6P51797 869 aa6.84□□□□□ -1.31
RNU6-279P-201ENST00000391297 SPDYE1Q8NFV5 336 aaPredicted RBP6.8□□□□□ -1.32
RNU6-279P-201ENST00000391297 POTEJP0CG39 1038 aa6.78□□□□□ -1.32
RNU6-279P-201ENST00000391297 GALR2O43603 387 aaPredicted RBP6.74□□□□□ -1.33
RNU6-279P-201ENST00000391297 SPNS2Q8IVW8 549 aa6.74□□□□□ -1.33
RNU6-279P-201ENST00000391297 PELP1Q8IZL8 1130 aaKnown RBP6.7□□□□□ -1.34
RNU6-279P-201ENST00000391297 MAMSTRQ6ZN01 415 aa6.68□□□□□ -1.34
RNU6-279P-201ENST00000391297 ZNF579Q8NAF0 562 aaKnown RBP6.68□□□□□ -1.34
RNU6-279P-201ENST00000391297 SPDYE2BA6NHP3 402 aa6.65□□□□□ -1.34
RNU6-279P-201ENST00000391297 SPDYE6P0CI01 402 aa6.65□□□□□ -1.34
RNU6-279P-201ENST00000391297 SPDYE2Q495Y8 402 aa6.65□□□□□ -1.34
RNU6-279P-201ENST00000391297 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
RNU6-279P-201ENST00000391297 FARP1Q9Y4F1 1045 aaPredicted RBP6.64□□□□□ -1.35
RNU6-279P-201ENST00000391297 SCUBE2Q9NQ36 999 aa6.63□□□□□ -1.35
RNU6-279P-201ENST00000391297 ZRANB1Q9UGI0 708 aa6.63□□□□□ -1.35
RNU6-279P-201ENST00000391297 ATF5Q9Y2D1 282 aaPredicted RBP6.63□□□□□ -1.35
RNU6-279P-201ENST00000391297 MYCNP04198 464 aaPredicted RBP6.62□□□□□ -1.35
RNU6-279P-201ENST00000391297 PRR29P0C7W0 189 aa6.61□□□□□ -1.35
RNU6-279P-201ENST00000391297 C7P10643 843 aa6.53□□□□□ -1.36
RNU6-279P-201ENST00000391297 SLC39A7Q92504 469 aa6.53□□□□□ -1.36
RNU6-279P-201ENST00000391297 ST18O60284 1047 aa6.51□□□□□ -1.37
RNU6-279P-201ENST00000391297 PHF12Q96QT6 1004 aa6.47□□□□□ -1.37
RNU6-279P-201ENST00000391297 ASTLQ6HA08 431 aaPredicted RBP6.46□□□□□ -1.38
RNU6-279P-201ENST00000391297 SSUH2Q9Y2M2 353 aa6.46□□□□□ -1.38
RNU6-279P-201ENST00000391297 ATMINO43313 823 aaPredicted RBP6.45□□□□□ -1.38
RNU6-279P-201ENST00000391297 ZNF692Q9BU19 519 aaPredicted RBP6.45□□□□□ -1.38
RNU6-279P-201ENST00000391297 POTEFA5A3E0 1075 aa6.4□□□□□ -1.38
RNU6-279P-201ENST00000391297 FBLN2P98095 1184 aa6.35□□□□□ -1.39
RNU6-279P-201ENST00000391297 PABPN1Q86U42 306 aaKnown RBP eCLIP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms