RNA–Protein interactions for RNA: ENST00000390377.1

TRBV7-7-201, Transcript of T cell receptor beta variable 7-7, humanhuman

APPRIS P1 BASIC

Gene TRBV7-7, Length 347 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-7-201ENST00000390377 NISCHQ9Y2I1 1504 aa21.25■□□□□ 0.99
TRBV7-7-201ENST00000390377 ABCC9O60706 1549 aa19.19■□□□□ 0.66
TRBV7-7-201ENST00000390377 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
TRBV7-7-201ENST00000390377 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
TRBV7-7-201ENST00000390377 NACADO15069 1562 aa18.17■□□□□ 0.5
TRBV7-7-201ENST00000390377 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
TRBV7-7-201ENST00000390377 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
TRBV7-7-201ENST00000390377 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
TRBV7-7-201ENST00000390377 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRBV7-7-201ENST00000390377 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
TRBV7-7-201ENST00000390377 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
TRBV7-7-201ENST00000390377 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
TRBV7-7-201ENST00000390377 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
TRBV7-7-201ENST00000390377 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
TRBV7-7-201ENST00000390377 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
TRBV7-7-201ENST00000390377 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
TRBV7-7-201ENST00000390377 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
TRBV7-7-201ENST00000390377 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
TRBV7-7-201ENST00000390377 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
TRBV7-7-201ENST00000390377 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
TRBV7-7-201ENST00000390377 CUX2O14529 1486 aa16.74■□□□□ 0.27
TRBV7-7-201ENST00000390377 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
TRBV7-7-201ENST00000390377 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
TRBV7-7-201ENST00000390377 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
TRBV7-7-201ENST00000390377 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
TRBV7-7-201ENST00000390377 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
TRBV7-7-201ENST00000390377 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
TRBV7-7-201ENST00000390377 PEG3Q9GZU2 1588 aa16.49■□□□□ 0.23
TRBV7-7-201ENST00000390377 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
TRBV7-7-201ENST00000390377 NESP48681 1621 aa16.41■□□□□ 0.22
TRBV7-7-201ENST00000390377 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
TRBV7-7-201ENST00000390377 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
TRBV7-7-201ENST00000390377 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
TRBV7-7-201ENST00000390377 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
TRBV7-7-201ENST00000390377 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
TRBV7-7-201ENST00000390377 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
TRBV7-7-201ENST00000390377 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
TRBV7-7-201ENST00000390377 WDR62O43379 1518 aa16.12■□□□□ 0.17
TRBV7-7-201ENST00000390377 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
TRBV7-7-201ENST00000390377 CFTRP13569 1480 aa16.05■□□□□ 0.16
TRBV7-7-201ENST00000390377 WIZO95785 1651 aa16.04■□□□□ 0.16
TRBV7-7-201ENST00000390377 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
TRBV7-7-201ENST00000390377 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
TRBV7-7-201ENST00000390377 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
TRBV7-7-201ENST00000390377 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
TRBV7-7-201ENST00000390377 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
TRBV7-7-201ENST00000390377 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
TRBV7-7-201ENST00000390377 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
TRBV7-7-201ENST00000390377 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
TRBV7-7-201ENST00000390377 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
TRBV7-7-201ENST00000390377 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
TRBV7-7-201ENST00000390377 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
TRBV7-7-201ENST00000390377 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
TRBV7-7-201ENST00000390377 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
TRBV7-7-201ENST00000390377 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
TRBV7-7-201ENST00000390377 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
TRBV7-7-201ENST00000390377 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
TRBV7-7-201ENST00000390377 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
TRBV7-7-201ENST00000390377 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
TRBV7-7-201ENST00000390377 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRBV7-7-201ENST00000390377 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
TRBV7-7-201ENST00000390377 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
TRBV7-7-201ENST00000390377 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
TRBV7-7-201ENST00000390377 SOGA1O94964 1423 aa15.5■□□□□ 0.07
TRBV7-7-201ENST00000390377 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
TRBV7-7-201ENST00000390377 FBLN2P98095 1184 aa15.49■□□□□ 0.07
TRBV7-7-201ENST00000390377 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
TRBV7-7-201ENST00000390377 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
TRBV7-7-201ENST00000390377 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
TRBV7-7-201ENST00000390377 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
TRBV7-7-201ENST00000390377 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
TRBV7-7-201ENST00000390377 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
TRBV7-7-201ENST00000390377 CHD1O14646 1710 aa15.4■□□□□ 0.06
TRBV7-7-201ENST00000390377 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
TRBV7-7-201ENST00000390377 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
TRBV7-7-201ENST00000390377 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
TRBV7-7-201ENST00000390377 SYNJ1O43426 1573 aa15.36■□□□□ 0.05
TRBV7-7-201ENST00000390377 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
TRBV7-7-201ENST00000390377 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
TRBV7-7-201ENST00000390377 CUX1P39880 1505 aa15.33■□□□□ 0.04
TRBV7-7-201ENST00000390377 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
TRBV7-7-201ENST00000390377 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.03
TRBV7-7-201ENST00000390377 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.03
TRBV7-7-201ENST00000390377 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
TRBV7-7-201ENST00000390377 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
TRBV7-7-201ENST00000390377 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
TRBV7-7-201ENST00000390377 NUP160Q12769 1436 aa15.14■□□□□ 0.01
TRBV7-7-201ENST00000390377 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
TRBV7-7-201ENST00000390377 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
TRBV7-7-201ENST00000390377 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
TRBV7-7-201ENST00000390377 ERICH3Q5RHP9 1530 aa15.08■□□□□ 0.01
TRBV7-7-201ENST00000390377 TOP2BQ02880 1626 aa15.08■□□□□ 0
TRBV7-7-201ENST00000390377 ADAMTS12P58397 1594 aa15.06■□□□□ 0
TRBV7-7-201ENST00000390377 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
TRBV7-7-201ENST00000390377 CEP170Q5SW79 1584 aa15.04■□□□□ -0
TRBV7-7-201ENST00000390377 SHROOM2Q13796 1616 aa15.03■□□□□ -0
TRBV7-7-201ENST00000390377 JPH4Q96JJ6 628 aa15.02■□□□□ -0
TRBV7-7-201ENST00000390377 ERCC6L2Q5T890 1561 aa14.99□□□□□ -0.01
TRBV7-7-201ENST00000390377 PRG4Q92954 1404 aaPredicted RBP14.98□□□□□ -0.01
TRBV7-7-201ENST00000390377 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms