RNA–Protein interactions for RNA: ENST00000390237.2

IGKC-201, Transcript of immunoglobulin kappa constant, humanhuman

APPRIS P1 BASIC

Gene IGKC, Length 523 nt, Biotype IG C gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKC-201ENST00000390237 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
IGKC-201ENST00000390237 ABCC9O60706 1549 aa15.53■□□□□ 0.08
IGKC-201ENST00000390237 CCDC180Q9P1Z9 1646 aa15.51■□□□□ 0.07
IGKC-201ENST00000390237 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.04
IGKC-201ENST00000390237 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
IGKC-201ENST00000390237 NACADO15069 1562 aa14.73□□□□□ -0.05
IGKC-201ENST00000390237 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
IGKC-201ENST00000390237 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
IGKC-201ENST00000390237 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.09
IGKC-201ENST00000390237 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
IGKC-201ENST00000390237 DCAF1Q9Y4B6 1507 aa14.44□□□□□ -0.1
IGKC-201ENST00000390237 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
IGKC-201ENST00000390237 UNC13AQ9UPW8 1703 aa14.39□□□□□ -0.11
IGKC-201ENST00000390237 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
IGKC-201ENST00000390237 SCRIBQ14160 1630 aa14.08□□□□□ -0.15
IGKC-201ENST00000390237 EIF4G1Q04637 1599 aaKnown RBP14.03□□□□□ -0.16
IGKC-201ENST00000390237 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
IGKC-201ENST00000390237 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
IGKC-201ENST00000390237 NCAPD3P42695 1498 aa13.7□□□□□ -0.22
IGKC-201ENST00000390237 AEBP2Q6ZN18 517 aaPredicted RBP13.69□□□□□ -0.22
IGKC-201ENST00000390237 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
IGKC-201ENST00000390237 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
IGKC-201ENST00000390237 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
IGKC-201ENST00000390237 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
IGKC-201ENST00000390237 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
IGKC-201ENST00000390237 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
IGKC-201ENST00000390237 BAZ1AQ9NRL2 1556 aaPredicted RBP13.46□□□□□ -0.25
IGKC-201ENST00000390237 CUX2O14529 1486 aa13.42□□□□□ -0.26
IGKC-201ENST00000390237 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
IGKC-201ENST00000390237 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
IGKC-201ENST00000390237 NESP48681 1621 aa13.38□□□□□ -0.27
IGKC-201ENST00000390237 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
IGKC-201ENST00000390237 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
IGKC-201ENST00000390237 CADPSQ9ULU8 1353 aa13.25□□□□□ -0.29
IGKC-201ENST00000390237 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
IGKC-201ENST00000390237 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
IGKC-201ENST00000390237 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
IGKC-201ENST00000390237 WIZO95785 1651 aa13.18□□□□□ -0.3
IGKC-201ENST00000390237 CFTRP13569 1480 aa13.1□□□□□ -0.31
IGKC-201ENST00000390237 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
IGKC-201ENST00000390237 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
IGKC-201ENST00000390237 WDR62O43379 1518 aa13.06□□□□□ -0.32
IGKC-201ENST00000390237 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
IGKC-201ENST00000390237 FANCD2Q9BXW9 1451 aa13.03□□□□□ -0.32
IGKC-201ENST00000390237 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
IGKC-201ENST00000390237 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
IGKC-201ENST00000390237 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
IGKC-201ENST00000390237 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
IGKC-201ENST00000390237 IFT140Q96RY7 1462 aa12.79□□□□□ -0.36
IGKC-201ENST00000390237 TOPBP1Q92547 1522 aa12.79□□□□□ -0.36
IGKC-201ENST00000390237 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
IGKC-201ENST00000390237 ABCC8Q09428 1581 aa12.78□□□□□ -0.36
IGKC-201ENST00000390237 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
IGKC-201ENST00000390237 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
IGKC-201ENST00000390237 CHIC1Q5VXU3 224 aa12.71□□□□□ -0.37
IGKC-201ENST00000390237 DNMBPQ6XZF7 1577 aa12.7□□□□□ -0.38
IGKC-201ENST00000390237 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
IGKC-201ENST00000390237 AQRO60306 1485 aaKnown RBP eCLIP12.67□□□□□ -0.38
IGKC-201ENST00000390237 POLA1P09884 1462 aaPredicted RBP12.67□□□□□ -0.38
IGKC-201ENST00000390237 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
IGKC-201ENST00000390237 SOGA1O94964 1423 aa12.62□□□□□ -0.39
IGKC-201ENST00000390237 EIF4G3O43432 1585 aaKnown RBP12.61□□□□□ -0.39
IGKC-201ENST00000390237 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
IGKC-201ENST00000390237 CUX1P39880 1505 aa12.58□□□□□ -0.4
IGKC-201ENST00000390237 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.4
IGKC-201ENST00000390237 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.4
IGKC-201ENST00000390237 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.4
IGKC-201ENST00000390237 ARHGEF11O15085 1522 aa12.57□□□□□ -0.4
IGKC-201ENST00000390237 FGD5Q6ZNL6 1462 aa12.56□□□□□ -0.4
IGKC-201ENST00000390237 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
IGKC-201ENST00000390237 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
IGKC-201ENST00000390237 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
IGKC-201ENST00000390237 FBLN2P98095 1184 aa12.5□□□□□ -0.41
IGKC-201ENST00000390237 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
IGKC-201ENST00000390237 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
IGKC-201ENST00000390237 MAGI1Q96QZ7 1491 aaPredicted RBP12.48□□□□□ -0.41
IGKC-201ENST00000390237 ARAP1Q96P48 1450 aa12.47□□□□□ -0.41
IGKC-201ENST00000390237 CHMP7Q8WUX9 453 aaPredicted RBP12.47□□□□□ -0.41
IGKC-201ENST00000390237 CHD1O14646 1710 aa12.47□□□□□ -0.41
IGKC-201ENST00000390237 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
IGKC-201ENST00000390237 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.42
IGKC-201ENST00000390237 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
IGKC-201ENST00000390237 GAPVD1Q14C86 1478 aa12.45□□□□□ -0.42
IGKC-201ENST00000390237 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
IGKC-201ENST00000390237 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
IGKC-201ENST00000390237 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
IGKC-201ENST00000390237 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
IGKC-201ENST00000390237 NUP160Q12769 1436 aa12.34□□□□□ -0.43
IGKC-201ENST00000390237 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.43
IGKC-201ENST00000390237 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
IGKC-201ENST00000390237 FHAD1B1AJZ9 1412 aa12.31□□□□□ -0.44
IGKC-201ENST00000390237 PBRM1Q86U86 1689 aa12.31□□□□□ -0.44
IGKC-201ENST00000390237 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
IGKC-201ENST00000390237 ERICH3Q5RHP9 1530 aa12.28□□□□□ -0.44
IGKC-201ENST00000390237 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
IGKC-201ENST00000390237 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
IGKC-201ENST00000390237 ERCC6L2Q5T890 1561 aa12.26□□□□□ -0.45
IGKC-201ENST00000390237 IGF1RP08069 1367 aa12.24□□□□□ -0.45
IGKC-201ENST00000390237 JPH4Q96JJ6 628 aa12.24□□□□□ -0.45
IGKC-201ENST00000390237 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms