RNA–Protein interactions for RNA: ENST00000389704.3

EXOSC8-202, Transcript of exosome component 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC8, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-202ENST00000389704 NISCHQ9Y2I1 1504 aa41.45■■■■■ 4.23
EXOSC8-202ENST00000389704 CCDC180Q9P1Z9 1646 aa37■■■■□ 3.51
EXOSC8-202ENST00000389704 ABCC9O60706 1549 aa36.89■■■■□ 3.5
EXOSC8-202ENST00000389704 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
EXOSC8-202ENST00000389704 DCAF8L2P0C7V8 631 aa35.05■■■■□ 3.2
EXOSC8-202ENST00000389704 NACADO15069 1562 aa35.04■■■■□ 3.2
EXOSC8-202ENST00000389704 MYO15BQ96JP2 1530 aa34.66■■■■□ 3.14
EXOSC8-202ENST00000389704 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
EXOSC8-202ENST00000389704 DNAJC5BQ9UF47 199 aa34.45■■■■□ 3.11
EXOSC8-202ENST00000389704 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
EXOSC8-202ENST00000389704 DCAF1Q9Y4B6 1507 aa34.27■■■■□ 3.08
EXOSC8-202ENST00000389704 UNC13AQ9UPW8 1703 aa34.26■■■■□ 3.07
EXOSC8-202ENST00000389704 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
EXOSC8-202ENST00000389704 SHROOM4Q9ULL8 1493 aa33.79■■■■□ 3
EXOSC8-202ENST00000389704 SCRIBQ14160 1630 aa33.74■■■□□ 2.99
EXOSC8-202ENST00000389704 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
EXOSC8-202ENST00000389704 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
EXOSC8-202ENST00000389704 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
EXOSC8-202ENST00000389704 NCAPD3P42695 1498 aa32.39■■■□□ 2.78
EXOSC8-202ENST00000389704 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
EXOSC8-202ENST00000389704 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
EXOSC8-202ENST00000389704 SMARCA2P51531 1590 aa32.21■■■□□ 2.75
EXOSC8-202ENST00000389704 BAZ1AQ9NRL2 1556 aaPredicted RBP32.17■■■□□ 2.74
EXOSC8-202ENST00000389704 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
EXOSC8-202ENST00000389704 BAZ1BQ9UIG0 1483 aaKnown RBP31.99■■■□□ 2.71
EXOSC8-202ENST00000389704 PEG3Q9GZU2 1588 aa31.94■■■□□ 2.7
EXOSC8-202ENST00000389704 MROH2BQ7Z745 1585 aa31.91■■■□□ 2.7
EXOSC8-202ENST00000389704 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
EXOSC8-202ENST00000389704 CUX2O14529 1486 aa31.75■■■□□ 2.67
EXOSC8-202ENST00000389704 NESP48681 1621 aa31.71■■■□□ 2.67
EXOSC8-202ENST00000389704 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
EXOSC8-202ENST00000389704 DNAJC5Q9H3Z4 198 aa31.56■■■□□ 2.64
EXOSC8-202ENST00000389704 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
EXOSC8-202ENST00000389704 WIZO95785 1651 aa31.47■■■□□ 2.63
EXOSC8-202ENST00000389704 CADPSQ9ULU8 1353 aa31.45■■■□□ 2.63
EXOSC8-202ENST00000389704 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
EXOSC8-202ENST00000389704 THOC2Q8NI27 1593 aaKnown RBP31.28■■■□□ 2.6
EXOSC8-202ENST00000389704 KIF21AQ7Z4S6 1674 aa31.2■■■□□ 2.59
EXOSC8-202ENST00000389704 TOP2AP11388 1531 aaKnown RBP31.16■■■□□ 2.58
EXOSC8-202ENST00000389704 MRC2Q9UBG0 1479 aa31.11■■■□□ 2.57
EXOSC8-202ENST00000389704 CFTRP13569 1480 aa31.08■■■□□ 2.57
EXOSC8-202ENST00000389704 CEP164Q9UPV0 1460 aa31.04■■■□□ 2.56
EXOSC8-202ENST00000389704 FANCD2Q9BXW9 1451 aa31.03■■■□□ 2.56
EXOSC8-202ENST00000389704 WDR62O43379 1518 aa30.98■■■□□ 2.55
EXOSC8-202ENST00000389704 CCDC88BA6NC98 1476 aa30.85■■■□□ 2.53
EXOSC8-202ENST00000389704 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
EXOSC8-202ENST00000389704 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
EXOSC8-202ENST00000389704 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
EXOSC8-202ENST00000389704 OSCARQ8IYS5 282 aa30.45■■■□□ 2.47
EXOSC8-202ENST00000389704 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
EXOSC8-202ENST00000389704 TOPBP1Q92547 1522 aa30.44■■■□□ 2.46
EXOSC8-202ENST00000389704 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.45
EXOSC8-202ENST00000389704 ZNF608Q9ULD9 1512 aaPredicted RBP30.3■■■□□ 2.44
EXOSC8-202ENST00000389704 SUPT5HO00267 1087 aaKnown RBP30.25■■■□□ 2.43
EXOSC8-202ENST00000389704 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
EXOSC8-202ENST00000389704 POLA1P09884 1462 aaPredicted RBP30.14■■■□□ 2.42
EXOSC8-202ENST00000389704 AQRO60306 1485 aaKnown RBP eCLIP30.11■■■□□ 2.419e-7■■■■■ 31.4
EXOSC8-202ENST00000389704 SOGA1O94964 1423 aa30.09■■■□□ 2.41
EXOSC8-202ENST00000389704 TARBP1Q13395 1621 aaKnown RBP30.09■■■□□ 2.41
EXOSC8-202ENST00000389704 EIF4G3O43432 1585 aaKnown RBP30.08■■■□□ 2.41
EXOSC8-202ENST00000389704 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
EXOSC8-202ENST00000389704 TDRD9Q8NDG6 1382 aaKnown RBP29.99■■■□□ 2.39
EXOSC8-202ENST00000389704 FGD5Q6ZNL6 1462 aa29.98■■■□□ 2.39
EXOSC8-202ENST00000389704 FBLN2P98095 1184 aa29.97■■■□□ 2.39
EXOSC8-202ENST00000389704 CUX1P39880 1505 aa29.96■■■□□ 2.39
EXOSC8-202ENST00000389704 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
EXOSC8-202ENST00000389704 RIMBP3CA6NJZ7 1639 aa29.81■■■□□ 2.36
EXOSC8-202ENST00000389704 RIMBP3BA6NNM3 1639 aa29.81■■■□□ 2.36
EXOSC8-202ENST00000389704 RIMBP3Q9UFD9 1639 aa29.81■■■□□ 2.36
EXOSC8-202ENST00000389704 CHMP7Q8WUX9 453 aaPredicted RBP29.8■■■□□ 2.36
EXOSC8-202ENST00000389704 ARHGEF11O15085 1522 aa29.8■■■□□ 2.36
EXOSC8-202ENST00000389704 GRIN2BQ13224 1484 aa29.78■■■□□ 2.36
EXOSC8-202ENST00000389704 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
EXOSC8-202ENST00000389704 CHD1O14646 1710 aa29.75■■■□□ 2.35
EXOSC8-202ENST00000389704 MAGI1Q96QZ7 1491 aaPredicted RBP29.74■■■□□ 2.35
EXOSC8-202ENST00000389704 CYB5RLQ6IPT4 315 aa29.7■■■□□ 2.35
EXOSC8-202ENST00000389704 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
EXOSC8-202ENST00000389704 ABCA10Q8WWZ4 1543 aa29.69■■■□□ 2.34
EXOSC8-202ENST00000389704 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
EXOSC8-202ENST00000389704 SYNJ2O15056 1496 aa29.64■■■□□ 2.34
EXOSC8-202ENST00000389704 SYNJ1O43426 1573 aa29.57■■■□□ 2.32
EXOSC8-202ENST00000389704 TOP2BQ02880 1626 aa29.54■■■□□ 2.32
EXOSC8-202ENST00000389704 ABCA5Q8WWZ7 1642 aa29.52■■■□□ 2.32
EXOSC8-202ENST00000389704 CLASP1Q7Z460 1538 aa29.51■■■□□ 2.32
EXOSC8-202ENST00000389704 ARAP1Q96P48 1450 aa29.51■■■□□ 2.31
EXOSC8-202ENST00000389704 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
EXOSC8-202ENST00000389704 PBRM1Q86U86 1689 aa29.48■■■□□ 2.31
EXOSC8-202ENST00000389704 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
EXOSC8-202ENST00000389704 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
EXOSC8-202ENST00000389704 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
EXOSC8-202ENST00000389704 TRHP20396 242 aaPredicted RBP29.31■■■□□ 2.28
EXOSC8-202ENST00000389704 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
EXOSC8-202ENST00000389704 NUP160Q12769 1436 aa29.26■■■□□ 2.27
EXOSC8-202ENST00000389704 CEP170Q5SW79 1584 aa29.17■■■□□ 2.26
EXOSC8-202ENST00000389704 KIF27Q86VH2 1401 aa29.1■■■□□ 2.25
EXOSC8-202ENST00000389704 JPH4Q96JJ6 628 aa29.08■■■□□ 2.25
EXOSC8-202ENST00000389704 IGF1RP08069 1367 aa29.06■■■□□ 2.24
EXOSC8-202ENST00000389704 ERCC6L2Q5T890 1561 aa29.03■■■□□ 2.24
EXOSC8-202ENST00000389704 SHROOM2Q13796 1616 aa29.02■■■□□ 2.24
EXOSC8-202ENST00000389704 PRG4Q92954 1404 aaPredicted RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms