RNA–Protein interactions for RNA: ENST00000389286.8

PRTG-201, Transcript of protogenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRTG, Length 11,967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTG-201ENST00000389286 NISCHQ9Y2I1 1504 aa9.98□□□□□ -0.81
PRTG-201ENST00000389286 DCAF8L2P0C7V8 631 aa8.79□□□□□ -1
PRTG-201ENST00000389286 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
PRTG-201ENST00000389286 SHROOM4Q9ULL8 1493 aa8.69□□□□□ -1.02
PRTG-201ENST00000389286 CCDC180Q9P1Z9 1646 aa8.57□□□□□ -1.04
PRTG-201ENST00000389286 ZEB1P37275 1124 aaPredicted RBP8.45□□□□□ -1.06
PRTG-201ENST00000389286 ZCCHC6Q5VYS8 1495 aaKnown RBP8.4□□□□□ -1.06
PRTG-201ENST00000389286 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
PRTG-201ENST00000389286 HRCP23327 699 aa8.31□□□□□ -1.08
PRTG-201ENST00000389286 CHIC1Q5VXU3 224 aa8.28□□□□□ -1.08
PRTG-201ENST00000389286 TRIM41Q8WV44 630 aa8.28□□□□□ -1.08
PRTG-201ENST00000389286 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
PRTG-201ENST00000389286 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
PRTG-201ENST00000389286 DCAF1Q9Y4B6 1507 aa8.22□□□□□ -1.09
PRTG-201ENST00000389286 APLP2Q06481 763 aa8.17□□□□□ -1.1
PRTG-201ENST00000389286 CENPBP07199 599 aaPredicted RBP8.15□□□□□ -1.1
PRTG-201ENST00000389286 MYT1Q01538 1121 aa8.12□□□□□ -1.11
PRTG-201ENST00000389286 FAM9AQ8IZU1 332 aaPredicted RBP8.1□□□□□ -1.11
PRTG-201ENST00000389286 CCER1Q8TC90 406 aaPredicted RBP8.09□□□□□ -1.11
PRTG-201ENST00000389286 LOC105371045A0A1W2PR82 267 aa8.02□□□□□ -1.13
PRTG-201ENST00000389286 EHMT2Q96KQ7 1210 aa8□□□□□ -1.13
PRTG-201ENST00000389286 SCRIBQ14160 1630 aa8□□□□□ -1.13
PRTG-201ENST00000389286 MYO15BQ96JP2 1530 aa8□□□□□ -1.13
PRTG-201ENST00000389286 NACADO15069 1562 aa7.98□□□□□ -1.13
PRTG-201ENST00000389286 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
PRTG-201ENST00000389286 ABCC9O60706 1549 aa7.97□□□□□ -1.13
PRTG-201ENST00000389286 RB1CC1Q8TDY2 1594 aa7.95□□□□□ -1.14
PRTG-201ENST00000389286 RSF1Q96T23 1441 aaPredicted RBP7.88□□□□□ -1.15
PRTG-201ENST00000389286 PPARGC1BQ86YN6 1023 aaKnown RBP7.87□□□□□ -1.15
PRTG-201ENST00000389286 EEA1Q15075 1411 aa7.85□□□□□ -1.15
PRTG-201ENST00000389286 DIEXFQ68CQ4 756 aaKnown RBP7.84□□□□□ -1.15
PRTG-201ENST00000389286 BAZ1AQ9NRL2 1556 aaPredicted RBP7.83□□□□□ -1.16
PRTG-201ENST00000389286 TTBK1Q5TCY1 1321 aaPredicted RBP7.81□□□□□ -1.16
PRTG-201ENST00000389286 CLSPNQ9HAW4 1339 aa7.79□□□□□ -1.16
PRTG-201ENST00000389286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.77□□□□□ -1.17
PRTG-201ENST00000389286 CSRNP3Q8WYN3 585 aa7.76□□□□□ -1.17
PRTG-201ENST00000389286 NEFLP07196 543 aa7.75□□□□□ -1.17
PRTG-201ENST00000389286 ZNF316A6NFI3 1004 aaPredicted RBP7.74□□□□□ -1.17
PRTG-201ENST00000389286 GOLGA3Q08378 1498 aa7.71□□□□□ -1.17
PRTG-201ENST00000389286 ACIN1Q9UKV3 1341 aaKnown RBP7.71□□□□□ -1.17
PRTG-201ENST00000389286 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
PRTG-201ENST00000389286 RANGAP1P46060 587 aaPredicted RBP7.69□□□□□ -1.18
PRTG-201ENST00000389286 TNIKQ9UKE5 1360 aa7.69□□□□□ -1.18
PRTG-201ENST00000389286 HNRNPUL2Q1KMD3 747 aaKnown RBP7.68□□□□□ -1.18
PRTG-201ENST00000389286 CEP164Q9UPV0 1460 aa7.67□□□□□ -1.18
PRTG-201ENST00000389286 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
PRTG-201ENST00000389286 TOP2AP11388 1531 aaKnown RBP7.66□□□□□ -1.18
PRTG-201ENST00000389286 WIZO95785 1651 aa7.65□□□□□ -1.19
PRTG-201ENST00000389286 MROH2BQ7Z745 1585 aa7.65□□□□□ -1.19
PRTG-201ENST00000389286 GTF3C3Q9Y5Q9 886 aa7.64□□□□□ -1.19
PRTG-201ENST00000389286 ERICH6Q7L0X2 663 aa7.64□□□□□ -1.19
PRTG-201ENST00000389286 WRNQ14191 1432 aaPredicted RBP eCLIP7.63□□□□□ -1.19
PRTG-201ENST00000389286 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
PRTG-201ENST00000389286 CLIP1P30622 1438 aa7.62□□□□□ -1.19
PRTG-201ENST00000389286 CECR2Q9BXF3 1484 aa7.61□□□□□ -1.19
PRTG-201ENST00000389286 SMARCA4P51532 1647 aa7.61□□□□□ -1.19
PRTG-201ENST00000389286 SMARCA2P51531 1590 aa7.59□□□□□ -1.19
PRTG-201ENST00000389286 BAZ1BQ9UIG0 1483 aaKnown RBP7.59□□□□□ -1.19
PRTG-201ENST00000389286 PABPN1Q86U42 306 aaKnown RBP eCLIP7.58□□□□□ -1.2
PRTG-201ENST00000389286 CCDC88BA6NC98 1476 aa7.56□□□□□ -1.2
PRTG-201ENST00000389286 ITGAEP38570 1179 aa7.54□□□□□ -1.2
PRTG-201ENST00000389286 SCAF1Q9H7N4 1312 aaKnown RBP7.53□□□□□ -1.2
PRTG-201ENST00000389286 KIF27Q86VH2 1401 aa7.52□□□□□ -1.2
PRTG-201ENST00000389286 ANP32CO43423 234 aa7.52□□□□□ -1.21
PRTG-201ENST00000389286 VPS8Q8N3P4 1428 aa7.52□□□□□ -1.21
PRTG-201ENST00000389286 ABCC8Q09428 1581 aa7.52□□□□□ -1.21
PRTG-201ENST00000389286 NEUROD1Q13562 356 aa7.51□□□□□ -1.21
PRTG-201ENST00000389286 FAM50AQ14320 339 aaKnown RBP7.5□□□□□ -1.21
PRTG-201ENST00000389286 KIF21BO75037 1637 aa7.48□□□□□ -1.21
PRTG-201ENST00000389286 FHAD1B1AJZ9 1412 aa7.47□□□□□ -1.21
PRTG-201ENST00000389286 TIMELESSQ9UNS1 1208 aa7.47□□□□□ -1.21
PRTG-201ENST00000389286 SOGA1O94964 1423 aa7.46□□□□□ -1.21
PRTG-201ENST00000389286 TONSLQ96HA7 1378 aa7.44□□□□□ -1.22
PRTG-201ENST00000389286 MYT1LQ9UL68 1186 aa7.43□□□□□ -1.22
PRTG-201ENST00000389286 CDK11AQ9UQ88 783 aaPredicted RBP7.42□□□□□ -1.22
PRTG-201ENST00000389286 CCNB3Q8WWL7 1395 aa7.42□□□□□ -1.22
PRTG-201ENST00000389286 MIER1Q8N108 512 aa7.41□□□□□ -1.22
PRTG-201ENST00000389286 ERICH3Q5RHP9 1530 aa7.41□□□□□ -1.22
PRTG-201ENST00000389286 UNC13AQ9UPW8 1703 aa7.39□□□□□ -1.23
PRTG-201ENST00000389286 TRIM52Q96A61 297 aa7.38□□□□□ -1.23
PRTG-201ENST00000389286 ATAD2BQ9ULI0 1458 aa7.37□□□□□ -1.23
PRTG-201ENST00000389286 PEG3Q9GZU2 1588 aa7.37□□□□□ -1.23
PRTG-201ENST00000389286 MTUS2Q5JR59 1369 aa7.37□□□□□ -1.23
PRTG-201ENST00000389286 DAXXQ9UER7 740 aaPredicted RBP7.36□□□□□ -1.23
PRTG-201ENST00000389286 RAPGEF2Q9Y4G8 1499 aa7.35□□□□□ -1.23
PRTG-201ENST00000389286 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
PRTG-201ENST00000389286 RTL5Q5HYW3 569 aaPredicted RBP7.35□□□□□ -1.23
PRTG-201ENST00000389286 SETD5Q9C0A6 1442 aa7.33□□□□□ -1.24
PRTG-201ENST00000389286 ARHGAP35Q9NRY4 1499 aa7.33□□□□□ -1.24
PRTG-201ENST00000389286 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
PRTG-201ENST00000389286 CCER2I3L3R5 266 aa7.32□□□□□ -1.24
PRTG-201ENST00000389286 FKBP8Q14318 412 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 CUX2O14529 1486 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 EIF4G1Q04637 1599 aaKnown RBP7.31□□□□□ -1.24
PRTG-201ENST00000389286 DDX10Q13206 875 aaKnown RBP7.31□□□□□ -1.24
PRTG-201ENST00000389286 CARMIL1Q5VZK9 1371 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 SYNJ1O43426 1573 aa7.31□□□□□ -1.24
PRTG-201ENST00000389286 HMGXB3Q12766 1538 aa7.3□□□□□ -1.24
PRTG-201ENST00000389286 EIF4G2P78344 907 aaKnown RBP eCLIP7.29□□□□□ -1.24
PRTG-201ENST00000389286 ERICH6BQ5W0A0 696 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms