RNA–Protein interactions for RNA: ENST00000384610.1

RNVU1-1-201, Transcript of RNA, variant U1 small nuclear 1, humanhuman

BASIC

Gene RNVU1-1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-1-201ENST00000384610 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
RNVU1-1-201ENST00000384610 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
RNVU1-1-201ENST00000384610 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
RNVU1-1-201ENST00000384610 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
RNVU1-1-201ENST00000384610 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
RNVU1-1-201ENST00000384610 ABCC9O60706 1549 aa18.67■□□□□ 0.58
RNVU1-1-201ENST00000384610 NACADO15069 1562 aa18.53■□□□□ 0.56
RNVU1-1-201ENST00000384610 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
RNVU1-1-201ENST00000384610 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
RNVU1-1-201ENST00000384610 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
RNVU1-1-201ENST00000384610 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
RNVU1-1-201ENST00000384610 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
RNVU1-1-201ENST00000384610 BICRAQ9NZM4 1560 aa17.69■□□□□ 0.42
RNVU1-1-201ENST00000384610 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
RNVU1-1-201ENST00000384610 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
RNVU1-1-201ENST00000384610 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
RNVU1-1-201ENST00000384610 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
RNVU1-1-201ENST00000384610 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
RNVU1-1-201ENST00000384610 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
RNVU1-1-201ENST00000384610 MROH2BQ7Z745 1585 aa17.32■□□□□ 0.36
RNVU1-1-201ENST00000384610 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
RNVU1-1-201ENST00000384610 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
RNVU1-1-201ENST00000384610 SMARCA2P51531 1590 aa17.21■□□□□ 0.35
RNVU1-1-201ENST00000384610 WIZO95785 1651 aa17.16■□□□□ 0.34
RNVU1-1-201ENST00000384610 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
RNVU1-1-201ENST00000384610 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
RNVU1-1-201ENST00000384610 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
RNVU1-1-201ENST00000384610 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
RNVU1-1-201ENST00000384610 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
RNVU1-1-201ENST00000384610 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
RNVU1-1-201ENST00000384610 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
RNVU1-1-201ENST00000384610 CFTRP13569 1480 aa16.61■□□□□ 0.25
RNVU1-1-201ENST00000384610 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
RNVU1-1-201ENST00000384610 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
RNVU1-1-201ENST00000384610 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
RNVU1-1-201ENST00000384610 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
RNVU1-1-201ENST00000384610 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
RNVU1-1-201ENST00000384610 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
RNVU1-1-201ENST00000384610 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
RNVU1-1-201ENST00000384610 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
RNVU1-1-201ENST00000384610 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
RNVU1-1-201ENST00000384610 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
RNVU1-1-201ENST00000384610 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
RNVU1-1-201ENST00000384610 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
RNVU1-1-201ENST00000384610 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
RNVU1-1-201ENST00000384610 NESP48681 1621 aa16.3■□□□□ 0.2
RNVU1-1-201ENST00000384610 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
RNVU1-1-201ENST00000384610 EEA1Q15075 1411 aa16.25■□□□□ 0.19
RNVU1-1-201ENST00000384610 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
RNVU1-1-201ENST00000384610 CUX1P39880 1505 aa16.24■□□□□ 0.19
RNVU1-1-201ENST00000384610 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
RNVU1-1-201ENST00000384610 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
RNVU1-1-201ENST00000384610 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
RNVU1-1-201ENST00000384610 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
RNVU1-1-201ENST00000384610 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
RNVU1-1-201ENST00000384610 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
RNVU1-1-201ENST00000384610 WDR62O43379 1518 aa16.09■□□□□ 0.17
RNVU1-1-201ENST00000384610 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
RNVU1-1-201ENST00000384610 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
RNVU1-1-201ENST00000384610 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
RNVU1-1-201ENST00000384610 SOGA1O94964 1423 aa16.03■□□□□ 0.16
RNVU1-1-201ENST00000384610 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.16
RNVU1-1-201ENST00000384610 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
RNVU1-1-201ENST00000384610 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
RNVU1-1-201ENST00000384610 CUX2O14529 1486 aa15.97■□□□□ 0.15
RNVU1-1-201ENST00000384610 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
RNVU1-1-201ENST00000384610 KIF21BO75037 1637 aa15.95■□□□□ 0.14
RNVU1-1-201ENST00000384610 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
RNVU1-1-201ENST00000384610 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
RNVU1-1-201ENST00000384610 RUSC2Q8N2Y8 1516 aa15.93■□□□□ 0.14
RNVU1-1-201ENST00000384610 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
RNVU1-1-201ENST00000384610 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
RNVU1-1-201ENST00000384610 GOLGA3Q08378 1498 aa15.91■□□□□ 0.14
RNVU1-1-201ENST00000384610 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
RNVU1-1-201ENST00000384610 CUL7Q14999 1698 aa15.88■□□□□ 0.13
RNVU1-1-201ENST00000384610 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
RNVU1-1-201ENST00000384610 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
RNVU1-1-201ENST00000384610 IGF1RP08069 1367 aa15.84■□□□□ 0.13
RNVU1-1-201ENST00000384610 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
RNVU1-1-201ENST00000384610 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
RNVU1-1-201ENST00000384610 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
RNVU1-1-201ENST00000384610 RAPGEF2Q9Y4G8 1499 aa15.79■□□□□ 0.12
RNVU1-1-201ENST00000384610 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
RNVU1-1-201ENST00000384610 TDRD9Q8NDG6 1382 aaKnown RBP15.78■□□□□ 0.12
RNVU1-1-201ENST00000384610 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
RNVU1-1-201ENST00000384610 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
RNVU1-1-201ENST00000384610 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
RNVU1-1-201ENST00000384610 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
RNVU1-1-201ENST00000384610 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
RNVU1-1-201ENST00000384610 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
RNVU1-1-201ENST00000384610 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
RNVU1-1-201ENST00000384610 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
RNVU1-1-201ENST00000384610 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
RNVU1-1-201ENST00000384610 SNAPC4Q5SXM2 1469 aa15.63■□□□□ 0.09
RNVU1-1-201ENST00000384610 SYNJ2O15056 1496 aa15.62■□□□□ 0.09
RNVU1-1-201ENST00000384610 CTTNBP2Q8WZ74 1663 aa15.61■□□□□ 0.09
RNVU1-1-201ENST00000384610 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
RNVU1-1-201ENST00000384610 CLIP1P30622 1438 aa15.6■□□□□ 0.09
RNVU1-1-201ENST00000384610 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
RNVU1-1-201ENST00000384610 EFCAB5A4FU69 1503 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms