RNA–Protein interactions for RNA: ENST00000384256.1

RNU6-49P-201, Transcript of RNA, U6 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU6-49P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-49P-201ENST00000384256 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
RNU6-49P-201ENST00000384256 CHIC1Q5VXU3 224 aa13.94□□□□□ -0.18
RNU6-49P-201ENST00000384256 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
RNU6-49P-201ENST00000384256 POTEDQ86YR6 584 aa12.75□□□□□ -0.37
RNU6-49P-201ENST00000384256 PHF23Q9BUL5 403 aaPredicted RBP12.52□□□□□ -0.41
RNU6-49P-201ENST00000384256 FOXD1Q16676 465 aa12□□□□□ -0.49
RNU6-49P-201ENST00000384256 MSH5O43196 834 aa11.68□□□□□ -0.54
RNU6-49P-201ENST00000384256 PIAS4Q8N2W9 510 aaPredicted RBP11.08□□□□□ -0.64
RNU6-49P-201ENST00000384256 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
RNU6-49P-201ENST00000384256 PPP6R1Q9UPN7 881 aa10.5□□□□□ -0.73
RNU6-49P-201ENST00000384256 ADRA2BP18089 450 aa10.47□□□□□ -0.73
RNU6-49P-201ENST00000384256 PLPPR3Q6T4P5 718 aa10.28□□□□□ -0.76
RNU6-49P-201ENST00000384256 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
RNU6-49P-201ENST00000384256 POTEHQ6S545 545 aa9.86□□□□□ -0.83
RNU6-49P-201ENST00000384256 MAPK8IP2Q13387 824 aaPredicted RBP9.85□□□□□ -0.83
RNU6-49P-201ENST00000384256 RNF39Q9H2S5 420 aa9.81□□□□□ -0.84
RNU6-49P-201ENST00000384256 DCAF8L1A6NGE4 600 aa9.75□□□□□ -0.85
RNU6-49P-201ENST00000384256 SCAF1Q9H7N4 1312 aaKnown RBP9.75□□□□□ -0.85
RNU6-49P-201ENST00000384256 C1QBPQ07021 282 aaKnown RBP9.67□□□□□ -0.86
RNU6-49P-201ENST00000384256 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
RNU6-49P-201ENST00000384256 DNAJC5BQ9UF47 199 aa9.19□□□□□ -0.94
RNU6-49P-201ENST00000384256 RNF216Q9NWF9 866 aaPredicted RBP9.04□□□□□ -0.96
RNU6-49P-201ENST00000384256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.95□□□□□ -0.98
RNU6-49P-201ENST00000384256 CNKSR2Q8WXI2 1034 aa8.92□□□□□ -0.98
RNU6-49P-201ENST00000384256 DSG3P32926 999 aa8.89□□□□□ -0.99
RNU6-49P-201ENST00000384256 SP7Q8TDD2 431 aaPredicted RBP8.85□□□□□ -0.99
RNU6-49P-201ENST00000384256 PPP4R3CPQ6ZMV5 832 aa8.84□□□□□ -0.99
RNU6-49P-201ENST00000384256 CAPN15O75808 1086 aa8.82□□□□□ -1
RNU6-49P-201ENST00000384256 CHRDL2Q6WN34 429 aa8.7□□□□□ -1.02
RNU6-49P-201ENST00000384256 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
RNU6-49P-201ENST00000384256 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
RNU6-49P-201ENST00000384256 U3KPZ7 1027 aaPredicted RBP8.57□□□□□ -1.04
RNU6-49P-201ENST00000384256 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
RNU6-49P-201ENST00000384256 ABCB7O75027 752 aa8.48□□□□□ -1.05
RNU6-49P-201ENST00000384256 TRHP20396 242 aaPredicted RBP8.46□□□□□ -1.06
RNU6-49P-201ENST00000384256 ZNF219Q9P2Y4 722 aaPredicted RBP8.45□□□□□ -1.06
RNU6-49P-201ENST00000384256 HAX1O00165 279 aa8.44□□□□□ -1.06
RNU6-49P-201ENST00000384256 APLP2Q06481 763 aa8.44□□□□□ -1.06
RNU6-49P-201ENST00000384256 NCBP3Q53F19 620 aaKnown RBP8.35□□□□□ -1.07
RNU6-49P-201ENST00000384256 LHX8Q68G74 356 aa8.3□□□□□ -1.08
RNU6-49P-201ENST00000384256 PIP4P2Q8N4L2 257 aa8.28□□□□□ -1.08
RNU6-49P-201ENST00000384256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.19□□□□□ -1.1
RNU6-49P-201ENST00000384256 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
RNU6-49P-201ENST00000384256 AKT1S1Q96B36 256 aa8.19□□□□□ -1.1
RNU6-49P-201ENST00000384256 EVX2Q03828 476 aa8.11□□□□□ -1.11
RNU6-49P-201ENST00000384256 NPM3O75607 178 aaKnown RBP8.1□□□□□ -1.11
RNU6-49P-201ENST00000384256 FXR2P51116 673 aaKnown RBP eCLIP8.08□□□□□ -1.12
RNU6-49P-201ENST00000384256 REM2Q8IYK8 340 aaPredicted RBP8.08□□□□□ -1.12
RNU6-49P-201ENST00000384256 SAMD1Q6SPF0 538 aaPredicted RBP8.06□□□□□ -1.12
RNU6-49P-201ENST00000384256 POLA2Q14181 598 aa8.01□□□□□ -1.13
RNU6-49P-201ENST00000384256 PITPNM1O00562 1244 aa7.99□□□□□ -1.13
RNU6-49P-201ENST00000384256 GABBR2O75899 941 aa7.97□□□□□ -1.13
RNU6-49P-201ENST00000384256 SLC4A2P04920 1241 aa7.91□□□□□ -1.14
RNU6-49P-201ENST00000384256 POTEMA6NI47 508 aa7.87□□□□□ -1.15
RNU6-49P-201ENST00000384256 ZBTB12Q9Y330 459 aaPredicted RBP7.87□□□□□ -1.15
RNU6-49P-201ENST00000384256 C19orf67A6NJJ6 358 aa7.86□□□□□ -1.15
RNU6-49P-201ENST00000384256 PCDH10Q9P2E7 1040 aa7.85□□□□□ -1.15
RNU6-49P-201ENST00000384256 PRKAR2AP13861 404 aaKnown RBP7.81□□□□□ -1.16
RNU6-49P-201ENST00000384256 POTEGQ6S5H5 508 aa7.8□□□□□ -1.16
RNU6-49P-201ENST00000384256 OSCARQ8IYS5 282 aa7.77□□□□□ -1.17
RNU6-49P-201ENST00000384256 POTEIP0CG38 1075 aa7.71□□□□□ -1.18
RNU6-49P-201ENST00000384256 CLCN6P51797 869 aa7.67□□□□□ -1.18
RNU6-49P-201ENST00000384256 DCBLD2Q96PD2 775 aa7.67□□□□□ -1.18
RNU6-49P-201ENST00000384256 OTUD5Q96G74 571 aa7.64□□□□□ -1.19
RNU6-49P-201ENST00000384256 CLEC11AQ9Y240 323 aa7.64□□□□□ -1.19
RNU6-49P-201ENST00000384256 SPDYE1Q8NFV5 336 aaPredicted RBP7.6□□□□□ -1.19
RNU6-49P-201ENST00000384256 MYCNP04198 464 aaPredicted RBP7.59□□□□□ -1.19
RNU6-49P-201ENST00000384256 CD44P16070 742 aaKnown RBP7.53□□□□□ -1.2
RNU6-49P-201ENST00000384256 SPDYE2BA6NHP3 402 aa7.5□□□□□ -1.21
RNU6-49P-201ENST00000384256 SPDYE6P0CI01 402 aa7.5□□□□□ -1.21
RNU6-49P-201ENST00000384256 SPDYE2Q495Y8 402 aa7.5□□□□□ -1.21
RNU6-49P-201ENST00000384256 CHADLQ6NUI6 762 aa7.5□□□□□ -1.21
RNU6-49P-201ENST00000384256 POTEB2H3BUK9 544 aa7.44□□□□□ -1.22
RNU6-49P-201ENST00000384256 FAM163AQ96GL9 167 aaPredicted RBP7.41□□□□□ -1.22
RNU6-49P-201ENST00000384256 PRR29P0C7W0 189 aa7.39□□□□□ -1.23
RNU6-49P-201ENST00000384256 MAMSTRQ6ZN01 415 aa7.38□□□□□ -1.23
RNU6-49P-201ENST00000384256 ATF5Q9Y2D1 282 aaPredicted RBP7.35□□□□□ -1.23
RNU6-49P-201ENST00000384256 CDAN1Q8IWY9 1227 aa7.34□□□□□ -1.23
RNU6-49P-201ENST00000384256 ZNF579Q8NAF0 562 aaKnown RBP7.34□□□□□ -1.23
RNU6-49P-201ENST00000384256 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
RNU6-49P-201ENST00000384256 FARP1Q9Y4F1 1045 aaPredicted RBP7.33□□□□□ -1.24
RNU6-49P-201ENST00000384256 FBLN2P98095 1184 aa7.31□□□□□ -1.24
RNU6-49P-201ENST00000384256 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
RNU6-49P-201ENST00000384256 ZRANB1Q9UGI0 708 aa7.29□□□□□ -1.24
RNU6-49P-201ENST00000384256 GALR2O43603 387 aaPredicted RBP7.28□□□□□ -1.24
RNU6-49P-201ENST00000384256 SCUBE2Q9NQ36 999 aa7.28□□□□□ -1.24
RNU6-49P-201ENST00000384256 MMRN1Q13201 1228 aa7.24□□□□□ -1.25
RNU6-49P-201ENST00000384256 SSUH2Q9Y2M2 353 aa7.24□□□□□ -1.25
RNU6-49P-201ENST00000384256 METRNQ9UJH8 293 aa7.23□□□□□ -1.25
RNU6-49P-201ENST00000384256 C7P10643 843 aa7.2□□□□□ -1.26
RNU6-49P-201ENST00000384256 SLC39A7Q92504 469 aa7.2□□□□□ -1.26
RNU6-49P-201ENST00000384256 POTEJP0CG39 1038 aa7.17□□□□□ -1.26
RNU6-49P-201ENST00000384256 KCNA4P22459 653 aa7.17□□□□□ -1.26
RNU6-49P-201ENST00000384256 PELP1Q8IZL8 1130 aaKnown RBP7.17□□□□□ -1.26
RNU6-49P-201ENST00000384256 SPNS2Q8IVW8 549 aa7.16□□□□□ -1.26
RNU6-49P-201ENST00000384256 PAK3O75914 559 aaPredicted RBP7.15□□□□□ -1.26
RNU6-49P-201ENST00000384256 PABPN1Q86U42 306 aaKnown RBP eCLIP7.12□□□□□ -1.27
RNU6-49P-201ENST00000384256 ASTLQ6HA08 431 aaPredicted RBP7.09□□□□□ -1.27
RNU6-49P-201ENST00000384256 PHF12Q96QT6 1004 aa7.06□□□□□ -1.28
RNU6-49P-201ENST00000384256 ATMINO43313 823 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms